Cyclosporin A_HCT15 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in HCT15 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_HCT15 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.200015
NDRG1 N-myc downstream regulated 1 0.185761
MYH9 myosin, heavy chain 9, non-muscle 0.176552
P4HB prolyl 4-hydroxylase, beta polypeptide 0.166788
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.160341
PABPC1 poly(A) binding protein, cytoplasmic 1 0.10794
VEGFA vascular endothelial growth factor A 0.0975551
ERRFI1 ERBB receptor feedback inhibitor 1 0.0824693
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0763529
KRT18 keratin 18, type I 0.0744684
PLEC plectin 0.071814
FAT1 FAT atypical cadherin 1 0.0707531
KRT8 keratin 8, type II 0.0696093
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.067894
TBC1D22A TBC1 domain family, member 22A 0.0667895
LOC112694756 uncharaterized LOC112694756 0.0647869
RPL3 ribosomal protein L3 0.0623999
HELZ helicase with zinc finger 0.0612391
DDIT4 DNA-damage-inducible transcript 4 0.0586466
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0575713
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0562821
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.053283
EGR1 early growth response 1 0.0503184
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.048278
YEATS2 YEATS domain containing 2 0.0478244
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0460142
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0454902
NUP58 nucleoporin 58 0.0449544
FLNB filamin B, beta 0.044308
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0441096
SRRM2 serine/arginine repetitive matrix 2 0.0438409
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.043531
UBA6 ubiquitin-like modifier activating enzyme 6 0.0422445
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0421779
CTBP2 C-terminal binding protein 2 0.0419121
CSNK1A1 casein kinase 1, alpha 1 0.0415765
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0412879
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0407509
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0404087
BHLHE40 basic helix-loop-helix family, member e40 0.0403052
MKI67 marker of proliferation Ki-67 0.0400572
HOXB9 homeobox B9 0.039862
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0397628
SETD5 SET domain containing 5 0.0390706
CDK19 cyclin-dependent kinase 19 0.0385037
BRD2 bromodomain containing 2 0.0382165
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.037928
MCL1 myeloid cell leukemia 1 0.0376883
APLP2 amyloid beta (A4) precursor-like protein 2 0.0376215
COPA coatomer protein complex, subunit alpha 0.0375684
PRELID2 PRELI domain containing 2 0.0373151
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0372791
ZNF292 zinc finger protein 292 0.0372376
DSCAM Down syndrome cell adhesion molecule 0.0367441
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0366531
HOOK2 hook microtubule-tethering protein 2 0.03614
DSPP dentin sialophosphoprotein 0.0356315
MED15 mediator complex subunit 15 0.0350764
BBX bobby sox homolog (Drosophila) 0.0346462
MACF1 microtubule-actin crosslinking factor 1 0.0346364
CANX calnexin 0.0339701
FLNA filamin A, alpha 0.0339045
SHB Src homology 2 domain containing adaptor protein B 0.0337257
KDM4C lysine (K)-specific demethylase 4C 0.033449
PKM pyruvate kinase, muscle 0.0333926
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0332947
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0327981
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0326781
GOLGA4 golgin A4 0.0325896
NONO non-POU domain containing, octamer-binding 0.0325482
WSB1 WD repeat and SOCS box containing 1 0.0322351
RAD23B RAD23 homolog B (S. cerevisiae) 0.0322131
NUMA1 nuclear mitotic apparatus protein 1 0.0320665
EIF4B eukaryotic translation initiation factor 4B 0.0320155
CEP250 centrosomal protein 250kDa 0.0319916
SEC31A SEC31 homolog A (S. cerevisiae) 0.03138
ANKRD11 ankyrin repeat domain 11 0.0313187
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0312236
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0305989
WAC WW domain containing adaptor with coiled-coil 0.0304284
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0302906
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0302096
PCBP2 poly(rC) binding protein 2 0.0297517
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0296556
RNF24 ring finger protein 24 0.0296403
BIRC6 baculoviral IAP repeat containing 6 0.0295712
CALR calreticulin 0.0295029
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0294506
KDM4B lysine (K)-specific demethylase 4B 0.0292957
ARL5B ADP-ribosylation factor-like 5B 0.0289671
PDIA3 protein disulfide isomerase family A, member 3 0.0286924
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0284243
KMT2C lysine (K)-specific methyltransferase 2C 0.0283306
TPM3 tropomyosin 3 0.0280272
PGK1 phosphoglycerate kinase 1 0.0278715
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0276607
RUNX1 runt-related transcription factor 1 0.027483
PRRC2A proline-rich coiled-coil 2A 0.0274287
HPCAL1 hippocalcin-like 1 0.0273925
ESYT2 extended synaptotagmin-like protein 2 0.0272005

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.221193
TPT1 tumor protein, translationally-controlled 1 -0.108218
AHNAK AHNAK nucleoprotein -0.105932
TMSB10 thymosin beta 10 -0.0584984
RPL35A ribosomal protein L35a -0.049057
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0484275
RPLP1 ribosomal protein, large, P1 -0.0452406
RPS24 ribosomal protein S24 -0.0434597
FTL ferritin, light polypeptide -0.041427
RPL34 ribosomal protein L34 -0.040803
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.036421
RPS6 ribosomal protein S6 -0.0327523
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0318288
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0302708
RPL4 ribosomal protein L4 -0.025923
RPLP2 ribosomal protein, large, P2 -0.0249012
CCDC47 coiled-coil domain containing 47 -0.0247042
RPS8 ribosomal protein S8 -0.0237097
JMJD1C jumonji domain containing 1C -0.0236072
RPS27A ribosomal protein S27a -0.0235701
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0232426
RPS20 ribosomal protein S20 -0.0227399
CCND1 cyclin D1 -0.0222014
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0221983
RPL12 ribosomal protein L12 -0.0219618
RPS16 ribosomal protein S16 -0.0214423
SPDYA speedy/RINGO cell cycle regulator family member A -0.0213131
R3HDM1 R3H domain containing 1 -0.0212545
GCC2 GRIP and coiled-coil domain containing 2 -0.0206501
RPS5 ribosomal protein S5 -0.020625
RPL27A ribosomal protein L27a -0.0200473
RPL28 ribosomal protein L28 -0.0197746
RTN3 reticulon 3 -0.0194395
RPS19 ribosomal protein S19 -0.0192855
EPCAM epithelial cell adhesion molecule -0.0187423
HMGB1 high mobility group box 1 -0.01865
MYL12B myosin, light chain 12B, regulatory -0.0186035
KPNB1 karyopherin (importin) beta 1 -0.0184891
RPS25 ribosomal protein S25 -0.0182367
RPL26 ribosomal protein L26 -0.0182345
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0180532
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) -0.0180386
PNRC1 proline-rich nuclear receptor coactivator 1 -0.017859
FAF1 Fas (TNFRSF6) associated factor 1 -0.0175584
RPL31 ribosomal protein L31 -0.017545
RPS2 ribosomal protein S2 -0.0173592
RPL38 ribosomal protein L38 -0.0170585
TENM3 teneurin transmembrane protein 3 -0.016835
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0167581
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0166228
RPL37 ribosomal protein L37 -0.016586
GPHN gephyrin -0.0164611
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0164596
PNISR PNN-interacting serine/arginine-rich protein -0.0162346
RPL32 ribosomal protein L32 -0.0162069
RPS28 ribosomal protein S28 -0.0160282
LRRC23 leucine rich repeat containing 23 -0.0160019
S100A10 S100 calcium binding protein A10 -0.0159623
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0158998
STAU1 staufen double-stranded RNA binding protein 1 -0.0158776
KLHDC10 kelch domain containing 10 -0.0158692
KDM3A lysine (K)-specific demethylase 3A -0.015761
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0156551
CDK13 cyclin-dependent kinase 13 -0.0156424
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0156228
RPL19 ribosomal protein L19 -0.015543
RSL1D1 ribosomal L1 domain containing 1 -0.0152682
RPS29 ribosomal protein S29 -0.0152345
NFIA nuclear factor I/A -0.0151321
UBB ubiquitin B -0.0148856
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0147533
MTDH metadherin -0.0147296
FRMD5 FERM domain containing 5 -0.0147154
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0146245
RPL14 ribosomal protein L14 -0.014551
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.014376
MBD5 methyl-CpG binding domain protein 5 -0.0142614
RPL39 ribosomal protein L39 -0.0142343
UBE2I ubiquitin-conjugating enzyme E2I -0.014067
RANBP17 RAN binding protein 17 -0.0140068
ZC3H12B zinc finger CCCH-type containing 12B -0.01384
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0138126
SRSF10 serine/arginine-rich splicing factor 10 -0.013746
TUT4 terminal uridylyl transferase 4 -0.0136509
NOP58 NOP58 ribonucleoprotein -0.0136393
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0134882
CXADR coxsackie virus and adenovirus receptor -0.0134142
RPS13 ribosomal protein S13 -0.0133659
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 -0.0133329
IER3 immediate early response 3 -0.0133027
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0132999
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0132352
EVI5 ecotropic viral integration site 5 -0.0131387
SCFD2 sec1 family domain containing 2 -0.0130947
RPS15 ribosomal protein S15 -0.0129907
EREG epiregulin -0.0128876
LMAN1 lectin, mannose-binding, 1 -0.0128373
ABLIM1 actin binding LIM protein 1 -0.0127378
RPL36 ribosomal protein L36 -0.0126092
TMEM123 transmembrane protein 123 -0.0125963