Cyclosporin A_HEC-1-A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in HEC-1-A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_HEC-1-A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.203016
PLEC plectin 0.129206
EEF2 eukaryotic translation elongation factor 2 0.119131
FLNA filamin A, alpha 0.114629
APP amyloid beta (A4) precursor protein 0.100985
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0979712
FLNB filamin B, beta 0.0855764
TNIP1 TNFAIP3 interacting protein 1 0.0709689
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0686548
LPP LIM domain containing preferred translocation partner in lipoma 0.0654472
SMAD3 SMAD family member 3 0.0644985
FNDC3B fibronectin type III domain containing 3B 0.063344
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0633079
CALR calreticulin 0.0604874
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0577919
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0573071
SEPTIN9 septin 9 0.0540856
PABPC1 poly(A) binding protein, cytoplasmic 1 0.050594
RPL3 ribosomal protein L3 0.0490706
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0487331
MACF1 microtubule-actin crosslinking factor 1 0.0486895
SETD5 SET domain containing 5 0.0485924
SREBF2 sterol regulatory element binding transcription factor 2 0.0479777
LAMC2 laminin, gamma 2 0.0476239
ASPH aspartate beta-hydroxylase 0.0461234
VEGFA vascular endothelial growth factor A 0.0459883
KRT7 keratin 7, type II 0.0456211
PTPRF protein tyrosine phosphatase, receptor type, F 0.044911
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0447175
CSNK1A1 casein kinase 1, alpha 1 0.0444064
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0442295
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0429237
USP9X ubiquitin specific peptidase 9, X-linked 0.0422737
PRRC2B proline-rich coiled-coil 2B 0.0409069
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0405768
TBC1D22A TBC1 domain family, member 22A 0.0402612
PAX8 paired box 8 0.0397162
CREB5 cAMP responsive element binding protein 5 0.0396953
MED15 mediator complex subunit 15 0.0393983
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0387094
BHLHE40 basic helix-loop-helix family, member e40 0.037498
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0371721
LAMB3 laminin, beta 3 0.0366393
ANKRD36 ankyrin repeat domain 36 0.0363781
NUMA1 nuclear mitotic apparatus protein 1 0.0363073
MPRIP myosin phosphatase Rho interacting protein 0.0362857
PRELID2 PRELI domain containing 2 0.0361977
SET SET nuclear proto-oncogene 0.0358695
PATJ PATJ crumbs cell polarity complex component 0.035604
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0355225
PSD3 pleckstrin and Sec7 domain containing 3 0.0353771
CANX calnexin 0.0351374
APLP2 amyloid beta (A4) precursor-like protein 2 0.0345149
MINK1 misshapen-like kinase 1 0.0340317
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0338115
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0330653
MYH14 myosin, heavy chain 14, non-muscle 0.0327601
PTK2 protein tyrosine kinase 2 0.0325113
AFDN afadin, adherens junction formation factor 0.0324867
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0323485
CLTC clathrin, heavy chain (Hc) 0.0321984
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.03145
HSPA8 heat shock 70kDa protein 8 0.0312425
NCOR2 nuclear receptor corepressor 2 0.0311305
UPP1 uridine phosphorylase 1 0.0308018
B2M beta-2-microglobulin 0.0305497
ANKRD11 ankyrin repeat domain 11 0.0303858
MKI67 marker of proliferation Ki-67 0.0303387
N4BP2L2 NEDD4 binding protein 2-like 2 0.0300934
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.029808
ATXN1 ataxin 1 0.0296943
TPM3 tropomyosin 3 0.0294534
GSK3B glycogen synthase kinase 3 beta 0.029434
PPP1R13L protein phosphatase 1, regulatory subunit 13 like 0.0293574
KDM6A lysine (K)-specific demethylase 6A 0.0293105
RNF213 ring finger protein 213 0.0291238
AHNAK2 AHNAK nucleoprotein 2 0.0290578
CD44 CD44 molecule (Indian blood group) 0.0290287
ARID1A AT rich interactive domain 1A (SWI-like) 0.028639
POTEF POTE ankyrin domain family, member F 0.0283278
RAD23B RAD23 homolog B (S. cerevisiae) 0.028196
COPA coatomer protein complex, subunit alpha 0.0278564
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0274864
ATXN2 ataxin 2 0.0274838
OSBPL10 oxysterol binding protein-like 10 0.0273205
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 0.0272863
FNIP1 folliculin interacting protein 1 0.027134
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0268797
CTBP2 C-terminal binding protein 2 0.0268134
BCL2L1 BCL2-like 1 0.0266679
ZFHX3 zinc finger homeobox 3 0.0266585
PDIA3 protein disulfide isomerase family A, member 3 0.0266288
PRRC2C proline-rich coiled-coil 2C 0.026436
ACTN1 actinin, alpha 1 0.0262083
LENG8 leukocyte receptor cluster (LRC) member 8 0.0258925
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0257976
ICAM1 intercellular adhesion molecule 1 0.0256608
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.025513
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0253172
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0248903

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.150843
FTL ferritin, light polypeptide -0.11717
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.116657
TMSB10 thymosin beta 10 -0.116412
TPT1 tumor protein, translationally-controlled 1 -0.102854
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0856539
RPL35A ribosomal protein L35a -0.073931
CCND1 cyclin D1 -0.067244
RPS6 ribosomal protein S6 -0.0634253
RHEX regulator of hemoglobinization and erythroid cell expansion -0.0482554
PTMA prothymosin, alpha -0.0462601
RPS24 ribosomal protein S24 -0.0447649
RPL19 ribosomal protein L19 -0.0447644
RPLP1 ribosomal protein, large, P1 -0.044584
RPL23 ribosomal protein L23 -0.0421055
RPS8 ribosomal protein S8 -0.0419244
ALCAM activated leukocyte cell adhesion molecule -0.0410399
ENO1 enolase 1, (alpha) -0.0403648
HMGB1 high mobility group box 1 -0.0398468
RPL12 ribosomal protein L12 -0.0395923
RPS19 ribosomal protein S19 -0.037909
AHNAK AHNAK nucleoprotein -0.0376514
LDHA lactate dehydrogenase A -0.0360512
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0348734
RPL28 ribosomal protein L28 -0.0342925
IER3 immediate early response 3 -0.0332335
RPL32 ribosomal protein L32 -0.0329115
SMC4 structural maintenance of chromosomes 4 -0.0326226
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0321551
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0318994
RPS14 ribosomal protein S14 -0.0316289
GNAS GNAS complex locus -0.0309444
RPLP2 ribosomal protein, large, P2 -0.0308157
RPL38 ribosomal protein L38 -0.0294907
S100A10 S100 calcium binding protein A10 -0.0292922
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.028562
RPL26 ribosomal protein L26 -0.0285369
MACROD2 MACRO domain containing 2 -0.028509
HMGA1 high mobility group AT-hook 1 -0.0284887
RPS15 ribosomal protein S15 -0.0279562
S100A9 S100 calcium binding protein A9 -0.0278193
RPL37A ribosomal protein L37a -0.0275905
RPL31 ribosomal protein L31 -0.0273793
RPL34 ribosomal protein L34 -0.0273195
RPS16 ribosomal protein S16 -0.0268482
RPS29 ribosomal protein S29 -0.0263387
RPL13A ribosomal protein L13a -0.0262526
RPL9 ribosomal protein L9 -0.0261808
NPR2 natriuretic peptide receptor 2 -0.0257134
VDAC1 voltage-dependent anion channel 1 -0.0254038
RPL27 ribosomal protein L27 -0.0251002
RPL4 ribosomal protein L4 -0.0244184
RPS5 ribosomal protein S5 -0.0239532
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0238526
RPL35 ribosomal protein L35 -0.0233636
LCORL ligand dependent nuclear receptor corepressor-like -0.0227459
RPL11 ribosomal protein L11 -0.0225278
RPS21 ribosomal protein S21 -0.0220912
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0220001
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.021872
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0218671
S100A6 S100 calcium binding protein A6 -0.0218481
RPL5 ribosomal protein L5 -0.0218138
WWOX WW domain containing oxidoreductase -0.021795
RPS20 ribosomal protein S20 -0.0215754
RPS27A ribosomal protein S27a -0.0213808
MYL12B myosin, light chain 12B, regulatory -0.0213008
RPS25 ribosomal protein S25 -0.0207158
LDHB lactate dehydrogenase B -0.020629
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0206162
ITGB8 integrin, beta 8 -0.0205757
DSTN destrin (actin depolymerizing factor) -0.0205194
LOC102724023 ES1 protein homolog, mitochondrial -0.0203766
DEK DEK proto-oncogene -0.0203107
TSC22D2 TSC22 domain family, member 2 -0.0200919
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0198428
FAM162A family with sequence similarity 162, member A -0.019735
EIF5B eukaryotic translation initiation factor 5B -0.0196827
RPS4X ribosomal protein S4, X-linked -0.019527
TFRC transferrin receptor -0.0193055
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0191395
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0191129
WWC1 WW and C2 domain containing 1 -0.0189986
RPL36 ribosomal protein L36 -0.0189693
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0188552
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0187396
MATR3 matrin 3 -0.0186275
RPS11 ribosomal protein S11 -0.0185304
ATP5F1B ATP synthase F1 subunit beta -0.0184828
RPS3 ribosomal protein S3 -0.0183796
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0182487
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0181417
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 -0.0181284
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0181024
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0178409
RPS23 ribosomal protein S23 -0.0176204
RPS2 ribosomal protein S2 -0.0174866
RPL27A ribosomal protein L27a -0.0174269
SFXN1 sideroflexin 1 -0.0171477
RTN4 reticulon 4 -0.0171273