Cyclosporin A_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.267275
MYH9 myosin, heavy chain 9, non-muscle 0.177442
VEGFA vascular endothelial growth factor A 0.142405
TRIO trio Rho guanine nucleotide exchange factor 0.118197
PLEC plectin 0.0792808
EEF2 eukaryotic translation elongation factor 2 0.0669093
NDRG1 N-myc downstream regulated 1 0.0611208
CADM1 cell adhesion molecule 1 0.0575912
BHLHE40 basic helix-loop-helix family, member e40 0.0549964
TNIP1 TNFAIP3 interacting protein 1 0.0547802
FNDC3B fibronectin type III domain containing 3B 0.0527644
ATP13A3 ATPase type 13A3 0.0515631
CDH13 cadherin 13 0.0496783
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0494053
NAV2 neuron navigator 2 0.0489393
SOD2 superoxide dismutase 2, mitochondrial 0.0470137
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0456961
ANKRD11 ankyrin repeat domain 11 0.0439311
NAMPT nicotinamide phosphoribosyltransferase 0.0432134
APP amyloid beta (A4) precursor protein 0.0383864
JARID2 jumonji, AT rich interactive domain 2 0.0383658
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0375748
CALR calreticulin 0.0375153
FLNA filamin A, alpha 0.0366799
CAMTA1 calmodulin binding transcription activator 1 0.0363695
ZFAND3 zinc finger, AN1-type domain 3 0.0352895
RAD21 RAD21 homolog (S. pombe) 0.0344612
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0343376
FMNL2 formin-like 2 0.0326521
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0321902
ARRDC3 arrestin domain containing 3 0.0315234
WSB1 WD repeat and SOCS box containing 1 0.0295742
PTK2 protein tyrosine kinase 2 0.0290836
RPL3 ribosomal protein L3 0.0288825
CD44 CD44 molecule (Indian blood group) 0.0288179
ZNF292 zinc finger protein 292 0.0279919
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0275411
RACK1 receptor for activated C kinase 1 0.0264921
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0262872
ANXA2 annexin A2 0.0261615
SMAD3 SMAD family member 3 0.025716
ICAM1 intercellular adhesion molecule 1 0.025467
QKI QKI, KH domain containing, RNA binding 0.025288
PDE10A phosphodiesterase 10A 0.0252124
RASA2 RAS p21 protein activator 2 0.0251032
MED15 mediator complex subunit 15 0.0242567
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.023857
GRB10 growth factor receptor-bound protein 10 0.0230293
MACF1 microtubule-actin crosslinking factor 1 0.0229019
NFE2L1 nuclear factor, erythroid 2-like 1 0.0225832
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0223242
TFG TRK-fused gene 0.0222609
CANX calnexin 0.022253
RND3 Rho family GTPase 3 0.0215323
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0214293
TNS1 tensin 1 0.0211714
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0209726
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0208609
LPP LIM domain containing preferred translocation partner in lipoma 0.0205874
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0204053
MRTFA myocardin related transcription factor A 0.0202101
SHB Src homology 2 domain containing adaptor protein B 0.0201888
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0201817
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0201721
PTMA prothymosin, alpha 0.0201715
HOOK2 hook microtubule-tethering protein 2 0.0196994
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0196438
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0196028
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0195278
HSPA8 heat shock 70kDa protein 8 0.0192033
YBX1 Y box binding protein 1 0.0190444
COL5A1 collagen, type V, alpha 1 0.0189894
ELL2 elongation factor, RNA polymerase II, 2 0.0189276
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0178757
FLNB filamin B, beta 0.0177461
AHDC1 AT hook, DNA binding motif, containing 1 0.0177179
ZMIZ1 zinc finger, MIZ-type containing 1 0.0176499
CCNY cyclin Y 0.0175786
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0175363
STK10 serine/threonine kinase 10 0.0175245
ADAM17 ADAM metallopeptidase domain 17 0.0174104
HIPK2 homeodomain interacting protein kinase 2 0.0173838
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0173779
COPA coatomer protein complex, subunit alpha 0.0173505
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0170032
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0169592
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0168286
TRAM2 translocation associated membrane protein 2 0.0166772
FAT1 FAT atypical cadherin 1 0.0162072
HMGB2 high mobility group box 2 0.0160761
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0160005
IL6ST interleukin 6 signal transducer 0.0159676
TMED9 transmembrane emp24 protein transport domain containing 9 0.0158871
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0157732
DENND5A DENN/MADD domain containing 5A 0.0157549
WTAP Wilms tumor 1 associated protein 0.0157421
MARCHF6 membrane associated ring-CH-type finger 6 0.0156924
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0154194
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0154019
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0153134

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.166032
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.153362
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.130909
IGFBP3 insulin-like growth factor binding protein 3 -0.124611
MT2A metallothionein 2A -0.122833
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0983014
COL1A1 collagen, type I, alpha 1 -0.092918
COL1A2 collagen, type I, alpha 2 -0.0819488
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0703383
LOX lysyl oxidase -0.0623772
TPM4 tropomyosin 4 -0.0573515
TMSB10 thymosin beta 10 -0.0481621
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0461683
MAP1B microtubule-associated protein 1B -0.0422432
ZBTB20 zinc finger and BTB domain containing 20 -0.0408918
LDHA lactate dehydrogenase A -0.0372952
CYB5R3 cytochrome b5 reductase 3 -0.0363023
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0354035
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0322358
FTL ferritin, light polypeptide -0.0311528
TAPBP TAP binding protein (tapasin) -0.0300277
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0294566
TIMP3 TIMP metallopeptidase inhibitor 3 -0.028561
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.028069
POSTN periostin, osteoblast specific factor -0.0274214
MYADM myeloid-associated differentiation marker -0.0253039
FBN1 fibrillin 1 -0.0247274
UBC ubiquitin C -0.0227744
ALCAM activated leukocyte cell adhesion molecule -0.0225121
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0223583
POTEF POTE ankyrin domain family, member F -0.0216185
EGR1 early growth response 1 -0.021525
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0213235
IER3 immediate early response 3 -0.0209919
HLA-A major histocompatibility complex, class I, A -0.0207167
ARF4 ADP-ribosylation factor 4 -0.0205452
DSTN destrin (actin depolymerizing factor) -0.0192444
VCAN versican -0.0187621
AXL AXL receptor tyrosine kinase -0.0187613
ECE1 endothelin converting enzyme 1 -0.018548
BSG basigin (Ok blood group) -0.018508
LMAN1 lectin, mannose-binding, 1 -0.0178676
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0178442
GOLGB1 golgin B1 -0.0177146
VDAC1 voltage-dependent anion channel 1 -0.0176599
CAV1 caveolin 1, caveolae protein, 22kDa -0.0173531
GLIS3 GLIS family zinc finger 3 -0.0171553
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0169208
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0168622
FN1 fibronectin 1 -0.0167133
PFN1 profilin 1 -0.0164821
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0156165
WASF2 WAS protein family, member 2 -0.0154294
DLG1 discs, large homolog 1 (Drosophila) -0.0154035
IL6 interleukin 6 -0.0149336
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0148149
SMC4 structural maintenance of chromosomes 4 -0.0146857
MBD5 methyl-CpG binding domain protein 5 -0.014322
IFITM3 interferon induced transmembrane protein 3 -0.0142777
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.0141965
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0141741
F3 coagulation factor III (thromboplastin, tissue factor) -0.0139587
ATP5F1B ATP synthase F1 subunit beta -0.0133615
RTN4 reticulon 4 -0.0132442
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0132124
MT1X metallothionein 1X -0.0131838
SPDYA speedy/RINGO cell cycle regulator family member A -0.0128332
LTBP1 latent transforming growth factor beta binding protein 1 -0.0127612
ANKRD12 ankyrin repeat domain 12 -0.0123849
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0123562
SLC38A2 solute carrier family 38, member 2 -0.0123212
MAML2 mastermind-like 2 (Drosophila) -0.0123115
TUBA1B tubulin, alpha 1b -0.0122921
SEC24A SEC24 family member A -0.0121995
S100A6 S100 calcium binding protein A6 -0.0121971
RPS19 ribosomal protein S19 -0.0120585
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0119798
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0118958
SCFD2 sec1 family domain containing 2 -0.0118221
RPL27A ribosomal protein L27a -0.0117803
TGFBI transforming growth factor, beta-induced, 68kDa -0.0116928
RPLP2 ribosomal protein, large, P2 -0.0115124
RPS16 ribosomal protein S16 -0.0114446
COL3A1 collagen, type III, alpha 1 -0.0114442
RPLP1 ribosomal protein, large, P1 -0.0113765
PKM pyruvate kinase, muscle -0.0113068
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0112678
EGFR epidermal growth factor receptor -0.0112167
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0108534
SKAP2 src kinase associated phosphoprotein 2 -0.0108166
CCND1 cyclin D1 -0.0107071
NRP1 neuropilin 1 -0.0106259
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0106187
RPS14 ribosomal protein S14 -0.0104586
YIPF5 Yip1 domain family, member 5 -0.0104194
CTSD cathepsin D -0.0103573
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0103467
MBNL1 muscleblind-like splicing regulator 1 -0.0102389
IFI6 interferon, alpha-inducible protein 6 -0.0101734
PERP PERP, TP53 apoptosis effector -0.0100969