Cyclosporin A_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.111503
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0926596
RAD21 RAD21 homolog (S. pombe) 0.0912906
EXT1 exostosin glycosyltransferase 1 0.0860257
EEF2 eukaryotic translation elongation factor 2 0.06896
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0613494
FBXO32 F-box protein 32 0.0553101
OGA O-GlcNAcase 0.0523487
ADARB1 adenosine deaminase, RNA-specific, B1 0.051791
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0498815
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0482389
MYH9 myosin, heavy chain 9, non-muscle 0.0481329
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0478438
MBNL2 muscleblind-like splicing regulator 2 0.0463369
PLEC plectin 0.0452779
HYOU1 hypoxia up-regulated 1 0.0446209
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0440934
KMT2C lysine (K)-specific methyltransferase 2C 0.0439304
KRT8 keratin 8, type II 0.0439187
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0431535
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0424889
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0422242
CSNK1A1 casein kinase 1, alpha 1 0.0416424
LOC112694756 uncharaterized LOC112694756 0.040675
DSCAM Down syndrome cell adhesion molecule 0.0402658
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0401731
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0384306
BRD2 bromodomain containing 2 0.0381647
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0380237
GCLC glutamate-cysteine ligase, catalytic subunit 0.036325
YBX1 Y box binding protein 1 0.0350421
KDM6A lysine (K)-specific demethylase 6A 0.0347444
SUCO SUN domain containing ossification factor 0.0336985
ERRFI1 ERBB receptor feedback inhibitor 1 0.0335618
PELI1 pellino E3 ubiquitin protein ligase 1 0.0333734
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0327397
PDZD8 PDZ domain containing 8 0.0325518
VEGFA vascular endothelial growth factor A 0.0325415
KDM3A lysine (K)-specific demethylase 3A 0.0323556
PDIA3 protein disulfide isomerase family A, member 3 0.0322909
RB1CC1 RB1-inducible coiled-coil 1 0.0317106
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0313598
TSC22D2 TSC22 domain family, member 2 0.0306983
TUFT1 tuftelin 1 0.0300134
SMAD3 SMAD family member 3 0.0298755
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0298407
HSPA8 heat shock 70kDa protein 8 0.0295002
CTNND1 catenin (cadherin-associated protein), delta 1 0.0292109
HELZ helicase with zinc finger 0.0290922
TRA2A transformer 2 alpha homolog (Drosophila) 0.0289699
ANLN anillin, actin binding protein 0.0287504
RICTOR RPTOR independent companion of MTOR, complex 2 0.0286532
MED15 mediator complex subunit 15 0.0286174
LMO7 LIM domain 7 0.0284142
CNOT12 CCR4-NOT transcription complex subunit 12 0.0283921
KRT18 keratin 18, type I 0.0282625
ANKRD11 ankyrin repeat domain 11 0.0281185
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0279845
MACF1 microtubule-actin crosslinking factor 1 0.0275279
ATAD2 ATPase family, AAA domain containing 2 0.0274221
USP9X ubiquitin specific peptidase 9, X-linked 0.0273921
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0273784
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0272788
SPRED2 sprouty-related, EVH1 domain containing 2 0.0271836
WNK1 WNK lysine deficient protein kinase 1 0.027086
PGM3 phosphoglucomutase 3 0.0270513
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0269909
RAD23B RAD23 homolog B (S. cerevisiae) 0.0269596
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.026905
EWSR1 EWS RNA-binding protein 1 0.0267532
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0266679
CEMIP2 cell migration inducing hyaluronidase 2 0.0265981
NUP58 nucleoporin 58 0.0265069
APLP2 amyloid beta (A4) precursor-like protein 2 0.026482
FAT1 FAT atypical cadherin 1 0.0264654
CUL3 cullin 3 0.0262895
CALU calumenin 0.0262891
HMGB2 high mobility group box 2 0.0262626
AFF1 AF4/FMR2 family, member 1 0.026035
CANX calnexin 0.0259058
PDIA4 protein disulfide isomerase family A, member 4 0.0258817
NUMA1 nuclear mitotic apparatus protein 1 0.025782
RND3 Rho family GTPase 3 0.025648
RBM39 RNA binding motif protein 39 0.0256477
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0256114
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0253481
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0252311
RAB1A RAB1A, member RAS oncogene family 0.0251424
TOP1 topoisomerase (DNA) I 0.0244533
SLMAP sarcolemma associated protein 0.0244213
TMED2 transmembrane emp24 domain trafficking protein 2 0.0242841
FLNA filamin A, alpha 0.0242641
RPLP0 ribosomal protein, large, P0 0.0242415
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.0241167
WAC WW domain containing adaptor with coiled-coil 0.0240543
ADAM17 ADAM metallopeptidase domain 17 0.0240128
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0240046
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0239027
PRRC2C proline-rich coiled-coil 2C 0.0238984
HOXB9 homeobox B9 0.0237879

decreased expression

Symbol Name Standardized Value
MYH14 myosin, heavy chain 14, non-muscle -0.116604
GMDS GDP-mannose 4,6-dehydratase -0.102756
LOC102724023 ES1 protein homolog, mitochondrial -0.101749
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0943885
FTH1 ferritin, heavy polypeptide 1 -0.0872788
FRY furry homolog (Drosophila) -0.0853856
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0805049
TPT1 tumor protein, translationally-controlled 1 -0.0788134
TMSB10 thymosin beta 10 -0.0781888
PTMA prothymosin, alpha -0.07582
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0739237
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0704129
ZBTB20 zinc finger and BTB domain containing 20 -0.0702745
ITPKC inositol-trisphosphate 3-kinase C -0.069441
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.065137
MAML3 mastermind-like 3 (Drosophila) -0.0644334
PTPRK protein tyrosine phosphatase, receptor type, K -0.0634588
PDE4D phosphodiesterase 4D, cAMP-specific -0.0633034
CCSER1 coiled-coil serine-rich protein 1 -0.0608731
DGKH diacylglycerol kinase, eta -0.0602719
DIAPH2 diaphanous-related formin 2 -0.0593449
RPS6 ribosomal protein S6 -0.0592673
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0592304
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0586027
KLF3 Kruppel-like factor 3 (basic) -0.0577659
LYZ lysozyme -0.0561202
ZMYND8 zinc finger, MYND-type containing 8 -0.0547148
SAMD12 sterile alpha motif domain containing 12 -0.0546915
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type -0.0540469
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0526377
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0504875
ANXA2 annexin A2 -0.0504594
KRT20 keratin 20, type I -0.0503629
WASF2 WAS protein family, member 2 -0.0498302
LAMA4 laminin, alpha 4 -0.0495176
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0490159
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0448433
TMC5 transmembrane channel-like 5 -0.0437514
S100A6 S100 calcium binding protein A6 -0.0434886
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0431376
FTL ferritin, light polypeptide -0.0430711
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0412546
TMEM123 transmembrane protein 123 -0.0411727
RNF213 ring finger protein 213 -0.0408652
EXOC4 exocyst complex component 4 -0.0406026
PCED1B PC-esterase domain containing 1B -0.0397994
SLC45A4 solute carrier family 45, member 4 -0.0396172
PATJ PATJ crumbs cell polarity complex component -0.0375661
POF1B premature ovarian failure, 1B -0.0374339
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.037422
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0367159
CA12 carbonic anhydrase XII -0.0366411
ETV6 ets variant 6 -0.0350285
MAML2 mastermind-like 2 (Drosophila) -0.0349308
ACACA acetyl-CoA carboxylase alpha -0.034683
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0340911
KLK10 kallikrein-related peptidase 10 -0.0337384
GCC2 GRIP and coiled-coil domain containing 2 -0.0329026
MUC13 mucin 13, cell surface associated -0.0328016
MMP7 matrix metallopeptidase 7 -0.0325248
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0320629
PPARD peroxisome proliferator-activated receptor delta -0.0315388
SOX4 SRY (sex determining region Y)-box 4 -0.0314257
KLF10 Kruppel-like factor 10 -0.0314214
KRT19 keratin 19, type I -0.0313164
FOXP1 forkhead box P1 -0.0308893
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) -0.0305377
PGK1 phosphoglycerate kinase 1 -0.0304879
PRKN parkin RBR E3 ubiquitin protein ligase -0.0304357
JUP junction plakoglobin -0.030266
JUN jun proto-oncogene -0.0294472
MECOM MDS1 and EVI1 complex locus -0.0292173
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) -0.02902
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0289601
ITGA1 integrin, alpha 1 -0.0285486
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0283536
POTEF POTE ankyrin domain family, member F -0.0283535
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0282157
LPP LIM domain containing preferred translocation partner in lipoma -0.0280965
TCF12 transcription factor 12 -0.0280834
PKM pyruvate kinase, muscle -0.0276476
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0274311
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0267621
NPC1 Niemann-Pick disease, type C1 -0.0266879
AHNAK AHNAK nucleoprotein -0.0266005
RRBP1 ribosome binding protein 1 -0.0264113
CCDC91 coiled-coil domain containing 91 -0.0259001
TRAPPC9 trafficking protein particle complex 9 -0.0258936
WNT2B wingless-type MMTV integration site family, member 2B -0.0257388
BPTF bromodomain PHD finger transcription factor -0.0255117
PRELID2 PRELI domain containing 2 -0.0254701
USP54 ubiquitin specific peptidase 54 -0.0253979
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0253394
EGR1 early growth response 1 -0.0251895
AGR2 anterior gradient 2 -0.0250874
SKAP1 src kinase associated phosphoprotein 1 -0.0250016
SLC38A1 solute carrier family 38, member 1 -0.0249132
CUX1 cut-like homeobox 1 -0.0248727
GPX2 glutathione peroxidase 2 -0.0246937
TRPS1 trichorhinophalangeal syndrome I -0.0245829