Cyclosporin A_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.226478
VEGFA vascular endothelial growth factor A 0.113189
MYH9 myosin, heavy chain 9, non-muscle 0.0903144
MBNL2 muscleblind-like splicing regulator 2 0.0864796
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0791616
PLEC plectin 0.066461
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0650836
FNDC3B fibronectin type III domain containing 3B 0.0630103
HYOU1 hypoxia up-regulated 1 0.0626529
NPSR1 neuropeptide S receptor 1 0.0625739
PDIA3 protein disulfide isomerase family A, member 3 0.0622647
FLNB filamin B, beta 0.0622288
KRT18 keratin 18, type I 0.0520408
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0474458
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0473553
LMO7 LIM domain 7 0.0472299
NCOR2 nuclear receptor corepressor 2 0.047022
MAML2 mastermind-like 2 (Drosophila) 0.0446813
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0444324
ANXA1 annexin A1 0.0441549
KLHL29 kelch-like family member 29 0.0440989
NDRG1 N-myc downstream regulated 1 0.0431189
GOLGA4 golgin A4 0.0406316
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0404132
PDIA6 protein disulfide isomerase family A, member 6 0.0390151
PGM3 phosphoglucomutase 3 0.0368197
EEF2 eukaryotic translation elongation factor 2 0.0363766
ARHGAP32 Rho GTPase activating protein 32 0.0354793
MYO5B myosin VB 0.0351952
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0344504
IARS1 isoleucyl-tRNA synthetase 1 0.0334777
GRB10 growth factor receptor-bound protein 10 0.0322428
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0319255
CSNK1A1 casein kinase 1, alpha 1 0.0318798
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0314602
SREBF2 sterol regulatory element binding transcription factor 2 0.0299654
ANXA2 annexin A2 0.0291749
HKDC1 hexokinase domain containing 1 0.0285553
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0278191
SRRM2 serine/arginine repetitive matrix 2 0.0273874
AKAP13 A kinase (PRKA) anchor protein 13 0.0273399
HM13 histocompatibility (minor) 13 0.0273023
NFE2L1 nuclear factor, erythroid 2-like 1 0.0269791
MACF1 microtubule-actin crosslinking factor 1 0.0268703
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0263627
TMED2 transmembrane emp24 domain trafficking protein 2 0.0262768
ANXA3 annexin A3 0.0262442
KIF16B kinesin family member 16B 0.0261866
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0261286
ERRFI1 ERBB receptor feedback inhibitor 1 0.0260702
MPRIP myosin phosphatase Rho interacting protein 0.0259488
RPL3 ribosomal protein L3 0.025193
H1-0 H1.0 linker histone 0.0251167
DSPP dentin sialophosphoprotein 0.0249992
TPM3 tropomyosin 3 0.0249368
NONO non-POU domain containing, octamer-binding 0.0248098
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.024797
MYO18A myosin XVIIIA 0.0247719
KRT7 keratin 7, type II 0.0244523
FAM13A family with sequence similarity 13, member A 0.0244279
ANO1 anoctamin 1, calcium activated chloride channel 0.0242969
MYH14 myosin, heavy chain 14, non-muscle 0.0242853
COPA coatomer protein complex, subunit alpha 0.0241837
SET SET nuclear proto-oncogene 0.0240602
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.0240201
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0238697
BIRC6 baculoviral IAP repeat containing 6 0.0238607
HDAC9 histone deacetylase 9 0.0237538
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0235825
LAMB3 laminin, beta 3 0.0235174
KRT8 keratin 8, type II 0.0234166
RAB6A RAB6A, member RAS oncogene family 0.0230627
GOLGB1 golgin B1 0.023024
FNIP1 folliculin interacting protein 1 0.0229451
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0229095
NUMA1 nuclear mitotic apparatus protein 1 0.0228684
BRD2 bromodomain containing 2 0.0227137
ANKRD11 ankyrin repeat domain 11 0.0226856
KRT17 keratin 17, type I 0.0226559
USP9X ubiquitin specific peptidase 9, X-linked 0.0226431
SPCS2 signal peptidase complex subunit 2 homolog (S. cerevisiae) 0.0223691
PRDM16 PR domain containing 16 0.022046
ITGA6 integrin, alpha 6 0.0218498
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0217385
TNIK TRAF2 and NCK interacting kinase 0.0216014
WARS1 tryptophanyl-tRNA synthetase 1 0.0215342
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0212267
HELZ helicase with zinc finger 0.0211981
ZCCHC7 zinc finger, CCHC domain containing 7 0.0209424
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.020888
DSCAM Down syndrome cell adhesion molecule 0.020881
KMT2D lysine (K)-specific methyltransferase 2D 0.0207456
TRIM2 tripartite motif containing 2 0.0206687
PMM2 phosphomannomutase 2 0.0205571
FLNA filamin A, alpha 0.0205324
COPG1 coatomer protein complex, subunit gamma 1 0.0203103
SND1 staphylococcal nuclease and tudor domain containing 1 0.0202452
RNF213 ring finger protein 213 0.0200527
BHLHE40 basic helix-loop-helix family, member e40 0.0200064
SEC31A SEC31 homolog A (S. cerevisiae) 0.0199896

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.168822
TPT1 tumor protein, translationally-controlled 1 -0.132192
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.115164
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0990343
RPL35A ribosomal protein L35a -0.0973603
RPLP1 ribosomal protein, large, P1 -0.0852763
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0837167
FTL ferritin, light polypeptide -0.0787209
RPS19 ribosomal protein S19 -0.0747603
RPS6 ribosomal protein S6 -0.0678402
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0639957
PTMA prothymosin, alpha -0.061634
RPL23 ribosomal protein L23 -0.0561728
RPS24 ribosomal protein S24 -0.054779
IFI27 interferon, alpha-inducible protein 27 -0.053489
S100A9 S100 calcium binding protein A9 -0.0534661
RPS25 ribosomal protein S25 -0.0524361
RPS21 ribosomal protein S21 -0.0485544
S100P S100 calcium binding protein P -0.0468961
EPCAM epithelial cell adhesion molecule -0.0466749
HLA-A major histocompatibility complex, class I, A -0.0464497
EIF1 eukaryotic translation initiation factor 1 -0.0463292
RPLP2 ribosomal protein, large, P2 -0.042696
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0414884
S100A6 S100 calcium binding protein A6 -0.0402257
RPL19 ribosomal protein L19 -0.0399869
RPL28 ribosomal protein L28 -0.0389479
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0388716
S100A10 S100 calcium binding protein A10 -0.0385059
RPL34 ribosomal protein L34 -0.0384951
RPS8 ribosomal protein S8 -0.0382928
NDUFA4 NDUFA4, mitochondrial complex associated -0.0373247
RPS16 ribosomal protein S16 -0.0373238
ATF5 activating transcription factor 5 -0.0364541
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0362115
MYL12B myosin, light chain 12B, regulatory -0.0359131
RPL26 ribosomal protein L26 -0.0354024
RPS29 ribosomal protein S29 -0.0352737
RPL38 ribosomal protein L38 -0.0339111
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0337799
RPL7A ribosomal protein L7a -0.0328372
SLC38A1 solute carrier family 38, member 1 -0.0325454
RPL27 ribosomal protein L27 -0.0325173
RPL9 ribosomal protein L9 -0.0324537
IFI6 interferon, alpha-inducible protein 6 -0.0322731
RPL12 ribosomal protein L12 -0.0317224
RPL36A ribosomal protein L36a -0.0316834
HLA-E major histocompatibility complex, class I, E -0.0314588
LOC102724023 ES1 protein homolog, mitochondrial -0.0312965
DEK DEK proto-oncogene -0.0312468
GSTP1 glutathione S-transferase pi 1 -0.030988
TM4SF1 transmembrane 4 L six family member 1 -0.0303113
RPS20 ribosomal protein S20 -0.0300847
B2M beta-2-microglobulin -0.0299221
RPL32 ribosomal protein L32 -0.0290486
IFITM3 interferon induced transmembrane protein 3 -0.0287884
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0287067
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0283915
TMC5 transmembrane channel-like 5 -0.0278174
RPL35 ribosomal protein L35 -0.02764
UBB ubiquitin B -0.0267825
SEC61G Sec61 gamma subunit -0.0263728
SERF2 small EDRK-rich factor 2 -0.025986
RRBP1 ribosome binding protein 1 -0.0256131
H3-3B H3.3 histone B -0.0251375
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0249937
IER3 immediate early response 3 -0.0246014
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0242469
TUBB4B tubulin, beta 4B class IVb -0.0238371
RPL8 ribosomal protein L8 -0.0235672
RPL37 ribosomal protein L37 -0.0233698
RPL37A ribosomal protein L37a -0.0233416
GNAS GNAS complex locus -0.0233081
ATP5F1E ATP synthase F1 subunit epsilon -0.0232851
HMGB1 high mobility group box 1 -0.023229
RPS27A ribosomal protein S27a -0.0230707
RPL36 ribosomal protein L36 -0.0227152
HLA-B major histocompatibility complex, class I, B -0.022359
IFITM1 interferon induced transmembrane protein 1 -0.0222755
COX4I1 cytochrome c oxidase subunit IV isoform 1 -0.0220044
RPS23 ribosomal protein S23 -0.0219893
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0219208
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0219105
TMEM123 transmembrane protein 123 -0.0218429
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa -0.0217327
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0215107
COX8A cytochrome c oxidase subunit VIIIA (ubiquitous) -0.0214757
ALCAM activated leukocyte cell adhesion molecule -0.0212506
CLDN4 claudin 4 -0.021205
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0209486
RPS15 ribosomal protein S15 -0.0208858
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0208006
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0206483
RPL31 ribosomal protein L31 -0.0206147
RPL5 ribosomal protein L5 -0.0205654
COX6C cytochrome c oxidase subunit VIc -0.0204525
HLA-C major histocompatibility complex, class I, C -0.020247
ZC3H12B zinc finger CCCH-type containing 12B -0.0200175
KLF6 Kruppel-like factor 6 -0.0199241
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0197567