Cyclosporin A_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.170157
FLNB filamin B, beta 0.113004
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.111219
PABPC1 poly(A) binding protein, cytoplasmic 1 0.106816
FAT1 FAT atypical cadherin 1 0.0958824
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0896461
EPS8 epidermal growth factor receptor pathway substrate 8 0.0894667
RPL3 ribosomal protein L3 0.0638456
MKI67 marker of proliferation Ki-67 0.0638428
MYH9 myosin, heavy chain 9, non-muscle 0.0633836
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0632876
TXNRD1 thioredoxin reductase 1 0.0608663
ITGA6 integrin, alpha 6 0.0587438
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0578209
GOLGA4 golgin A4 0.0531975
DSCAM Down syndrome cell adhesion molecule 0.0515951
GARS1 glycyl-tRNA synthetase 1 0.0507128
MYOF myoferlin 0.0471851
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0469821
RPL23 ribosomal protein L23 0.0454016
TNIP1 TNFAIP3 interacting protein 1 0.0442272
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0436832
SHROOM3 shroom family member 3 0.0435801
PKP2 plakophilin 2 0.0429202
YBX3 Y box binding protein 3 0.0420367
PRELID2 PRELI domain containing 2 0.0420255
PRRC2C proline-rich coiled-coil 2C 0.0401185
SREBF2 sterol regulatory element binding transcription factor 2 0.0379194
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0373922
VEGFA vascular endothelial growth factor A 0.0372726
ANKRD11 ankyrin repeat domain 11 0.0366508
SRRM2 serine/arginine repetitive matrix 2 0.0364733
SMAD3 SMAD family member 3 0.0358018
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0351665
KMT2C lysine (K)-specific methyltransferase 2C 0.0348193
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0346847
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0343244
EIF4B eukaryotic translation initiation factor 4B 0.0339806
RPL5 ribosomal protein L5 0.0339687
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.033966
EPHA2 EPH receptor A2 0.0336477
SETD5 SET domain containing 5 0.0335262
RACK1 receptor for activated C kinase 1 0.033451
DDIT4 DNA-damage-inducible transcript 4 0.0324112
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0323854
RNF145 ring finger protein 145 0.0319552
FOXO1 forkhead box O1 0.03175
CANX calnexin 0.0309845
EIF1 eukaryotic translation initiation factor 1 0.0309825
OGA O-GlcNAcase 0.0306868
AKAP13 A kinase (PRKA) anchor protein 13 0.0304387
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0304346
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0303954
ARHGAP26 Rho GTPase activating protein 26 0.0302334
NCOR2 nuclear receptor corepressor 2 0.0299837
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0293441
LRRC1 leucine rich repeat containing 1 0.0292096
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0291977
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0290761
AKAP9 A kinase (PRKA) anchor protein 9 0.029056
KMT2D lysine (K)-specific methyltransferase 2D 0.0290542
CALB1 calbindin 1, 28kDa 0.0289848
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0281659
CSNK1A1 casein kinase 1, alpha 1 0.0279776
CENPF centromere protein F, 350/400kDa 0.0279206
PLAC8 placenta-specific 8 0.0275691
TNRC18 trinucleotide repeat containing 18 0.0272821
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0272786
CDK19 cyclin-dependent kinase 19 0.0268027
ESYT2 extended synaptotagmin-like protein 2 0.02677
KTN1 kinectin 1 (kinesin receptor) 0.0266624
PDIA3 protein disulfide isomerase family A, member 3 0.0260002
UBA6 ubiquitin-like modifier activating enzyme 6 0.0258646
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.025859
BAIAP2L1 BAI1-associated protein 2-like 1 0.0256792
WARS1 tryptophanyl-tRNA synthetase 1 0.0254256
AFDN afadin, adherens junction formation factor 0.0253515
RAD21 RAD21 homolog (S. pombe) 0.025118
PTEN phosphatase and tensin homolog 0.0244737
PCDHB16 protocadherin beta 16 0.0243256
GDF15 growth differentiation factor 15 0.0242607
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.024214
XRN1 5'-3' exoribonuclease 1 0.0240989
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0240737
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0239016
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0238328
MED13L mediator complex subunit 13-like 0.0238279
WWC1 WW and C2 domain containing 1 0.0237498
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0236474
NKTR natural killer cell triggering receptor 0.023594
ZNF292 zinc finger protein 292 0.0235288
BIRC6 baculoviral IAP repeat containing 6 0.0234789
KIF16B kinesin family member 16B 0.0232652
HDLBP high density lipoprotein binding protein 0.0231284
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0228802
RBM39 RNA binding motif protein 39 0.0228552
TMED2 transmembrane emp24 domain trafficking protein 2 0.0228162
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.0225236
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.0224607
DYNC2I1 dynein 2 intermediate chain 1 0.0224071

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.189144
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0871521
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0734293
FRMD5 FERM domain containing 5 -0.0549011
HLA-B major histocompatibility complex, class I, B -0.054885
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0514791
IFI6 interferon, alpha-inducible protein 6 -0.0488339
RPS24 ribosomal protein S24 -0.0487878
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0462093
RPL31 ribosomal protein L31 -0.045613
RPLP2 ribosomal protein, large, P2 -0.0410983
SERINC5 serine incorporator 5 -0.0399024
RPLP1 ribosomal protein, large, P1 -0.0367015
F3 coagulation factor III (thromboplastin, tissue factor) -0.0366774
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0350949
RPS25 ribosomal protein S25 -0.0317118
MYO1E myosin IE -0.0311411
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0303735
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0292857
SP100 SP100 nuclear antigen -0.0286841
GMDS GDP-mannose 4,6-dehydratase -0.0285599
POTEF POTE ankyrin domain family, member F -0.0277386
S100A6 S100 calcium binding protein A6 -0.0268815
RPL34 ribosomal protein L34 -0.0263919
IFI27 interferon, alpha-inducible protein 27 -0.0257533
RPL37 ribosomal protein L37 -0.0256802
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0256078
NPSR1 neuropeptide S receptor 1 -0.0253432
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0251551
INTS6 integrator complex subunit 6 -0.0246531
MCU mitochondrial calcium uniporter -0.0242049
CATSPERB catsper channel auxiliary subunit beta -0.0241568
PERP PERP, TP53 apoptosis effector -0.0238521
RPL35A ribosomal protein L35a -0.0233664
RPL36A ribosomal protein L36a -0.023196
TSPAN8 tetraspanin 8 -0.0225329
RPL27A ribosomal protein L27a -0.0224857
THSD4 thrombospondin, type I, domain containing 4 -0.0224277
XAF1 XIAP associated factor 1 -0.0213915
DSG2 desmoglein 2 -0.0212099
ISG15 ISG15 ubiquitin-like modifier -0.0211549
SPINK13 serine peptidase inhibitor, Kazal type 13 (putative) -0.0210085
LOC102724023 ES1 protein homolog, mitochondrial -0.0208926
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0208832
RPL37A ribosomal protein L37a -0.0200173
ZFP36L2 ZFP36 ring finger protein-like 2 -0.0198871
CCSER1 coiled-coil serine-rich protein 1 -0.0198348
RPS29 ribosomal protein S29 -0.0198182
S100A11 S100 calcium binding protein A11 -0.0197794
ALCAM activated leukocyte cell adhesion molecule -0.0194874
ATP5F1B ATP synthase F1 subunit beta -0.0194208
RABGAP1L RAB GTPase activating protein 1-like -0.0193568
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) -0.0193242
RPL38 ribosomal protein L38 -0.0191825
NABP1 nucleic acid binding protein 1 -0.0190486
EMP1 epithelial membrane protein 1 -0.0189354
RIGI RNA sensor RIG-I -0.0186987
PIK3AP1 phosphoinositide-3-kinase adaptor protein 1 -0.018254
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0180566
TMBIM1 transmembrane BAX inhibitor motif containing 1 -0.0180554
LRRC23 leucine rich repeat containing 23 -0.0177533
CCND1 cyclin D1 -0.0177101
PSD3 pleckstrin and Sec7 domain containing 3 -0.0176859
PTPRR protein tyrosine phosphatase, receptor type, R -0.0174235
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0173357
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0172997
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 -0.0172551
S100P S100 calcium binding protein P -0.0172195
UBC ubiquitin C -0.0170002
RPS21 ribosomal protein S21 -0.0169049
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0168824
OSBPL8 oxysterol binding protein-like 8 -0.0164208
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 -0.0163894
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0163846
FAF1 Fas (TNFRSF6) associated factor 1 -0.0163021
RPL9 ribosomal protein L9 -0.0162846
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) -0.016259
PKM pyruvate kinase, muscle -0.0161396
HLA-A major histocompatibility complex, class I, A -0.0160194
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0159592
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0158968
IER3 immediate early response 3 -0.0156263
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0156095
EIF5B eukaryotic translation initiation factor 5B -0.0155626
AEBP2 AE binding protein 2 -0.0155255
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0154284
RNF217 ring finger protein 217 -0.0153662
SVIL supervillin -0.0153644
FOXO3 forkhead box O3 -0.0153562
IFRD1 interferon-related developmental regulator 1 -0.0151668
PTPRB protein tyrosine phosphatase, receptor type, B -0.0149538
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0148895
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0146732
FBXO11 F-box protein 11 -0.0146702
DSC3 desmocollin 3 -0.0145457
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.014225
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.01412
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -0.0140027
RPS11 ribosomal protein S11 -0.0139851
RPL39 ribosomal protein L39 -0.0139821