Cyclosporin A_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.115884
EEF2 eukaryotic translation elongation factor 2 0.0739405
MACF1 microtubule-actin crosslinking factor 1 0.0563073
FLNB filamin B, beta 0.055409
RAI1 retinoic acid induced 1 0.0550027
FMNL2 formin-like 2 0.0511357
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.048881
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0469191
TXNRD1 thioredoxin reductase 1 0.0426632
LOXL2 lysyl oxidase-like 2 0.0422564
UPP1 uridine phosphorylase 1 0.0409879
LOC112694756 uncharaterized LOC112694756 0.0408286
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0399011
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0381601
TM4SF1 transmembrane 4 L six family member 1 0.0370713
MYH9 myosin, heavy chain 9, non-muscle 0.0365252
NAV2 neuron navigator 2 0.0363488
CAPRIN2 caprin family member 2 0.0356892
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0356537
EZR ezrin 0.0352819
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0352746
TRIO trio Rho guanine nucleotide exchange factor 0.033876
PTPRF protein tyrosine phosphatase, receptor type, F 0.0332635
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0327161
TMEM41B transmembrane protein 41B 0.0322634
CANX calnexin 0.0314832
APP amyloid beta (A4) precursor protein 0.0306022
SPAG9 sperm associated antigen 9 0.0305
CSNK1A1 casein kinase 1, alpha 1 0.0278474
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0276975
KLF6 Kruppel-like factor 6 0.0275556
ARHGAP5 Rho GTPase activating protein 5 0.0272902
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0271097
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0270146
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0269742
FNIP1 folliculin interacting protein 1 0.0262484
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.025391
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0246618
ANGPTL4 angiopoietin-like 4 0.0245336
SQSTM1 sequestosome 1 0.0242245
PLEC plectin 0.0241514
EREG epiregulin 0.0240688
ESYT2 extended synaptotagmin-like protein 2 0.0240207
SREBF2 sterol regulatory element binding transcription factor 2 0.0238543
EIF1 eukaryotic translation initiation factor 1 0.023595
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0234488
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0234463
WWTR1 WW domain containing transcription regulator 1 0.0234243
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0231701
OGA O-GlcNAcase 0.022764
YEATS2 YEATS domain containing 2 0.0225218
TMSB4X thymosin beta 4, X-linked 0.0225216
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0225045
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0217822
HSPA8 heat shock 70kDa protein 8 0.0215486
ADAM17 ADAM metallopeptidase domain 17 0.0215294
ANXA1 annexin A1 0.0214947
FDPS farnesyl diphosphate synthase 0.0214519
PODXL podocalyxin-like 0.0214236
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0213235
KDM4B lysine (K)-specific demethylase 4B 0.0208837
BCAR3 breast cancer anti-estrogen resistance 3 0.0204052
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0202967
NDRG1 N-myc downstream regulated 1 0.0201456
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0201343
SLC38A2 solute carrier family 38, member 2 0.0194778
PYGL phosphorylase, glycogen, liver 0.0192114
USP9X ubiquitin specific peptidase 9, X-linked 0.0190147
MKI67 marker of proliferation Ki-67 0.019013
PLK2 polo-like kinase 2 0.0189333
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0189119
GSK3B glycogen synthase kinase 3 beta 0.018801
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0185693
SMAD3 SMAD family member 3 0.0183295
ACTN1 actinin, alpha 1 0.0182796
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0182075
RAB7A RAB7A, member RAS oncogene family 0.0181775
RPL3 ribosomal protein L3 0.0181127
ANXA2 annexin A2 0.0180998
CLIP1 CAP-GLY domain containing linker protein 1 0.0180347
MED15 mediator complex subunit 15 0.0179668
HDLBP high density lipoprotein binding protein 0.0179407
DPYSL2 dihydropyrimidinase-like 2 0.0177974
BIRC6 baculoviral IAP repeat containing 6 0.017685
HOOK2 hook microtubule-tethering protein 2 0.0175417
VEGFA vascular endothelial growth factor A 0.0175396
MBNL2 muscleblind-like splicing regulator 2 0.0174013
USP34 ubiquitin specific peptidase 34 0.0173804
CEP250 centrosomal protein 250kDa 0.0173645
RGS4 regulator of G-protein signaling 4 0.0173415
DENND1A DENN/MADD domain containing 1A 0.0173391
CDK19 cyclin-dependent kinase 19 0.0173266
ARRDC3 arrestin domain containing 3 0.017225
CLTC clathrin, heavy chain (Hc) 0.0172194
HDAC9 histone deacetylase 9 0.0171868
GIGYF2 GRB10 interacting GYF protein 2 0.0171241
KDM4C lysine (K)-specific demethylase 4C 0.0170634
NONO non-POU domain containing, octamer-binding 0.0169951
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0168293
LPIN1 lipin 1 0.0166966

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0734474
MT2A metallothionein 2A -0.0695923
TMSB10 thymosin beta 10 -0.0681146
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0587575
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0509801
CADM2 cell adhesion molecule 2 -0.0483604
POTEF POTE ankyrin domain family, member F -0.042436
CD44 CD44 molecule (Indian blood group) -0.0403518
TP63 tumor protein p63 -0.0397589
HMGA1 high mobility group AT-hook 1 -0.0375689
HLA-B major histocompatibility complex, class I, B -0.0373326
DPYD dihydropyrimidine dehydrogenase -0.0367005
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0352403
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0299908
RIGI RNA sensor RIG-I -0.0295897
FTL ferritin, light polypeptide -0.0295179
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0270176
IFIH1 interferon induced with helicase C domain 1 -0.0264448
PTMA prothymosin, alpha -0.0252236
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0247225
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.023998
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0235383
IFI6 interferon, alpha-inducible protein 6 -0.0232153
CFAP299 cilia and flagella associated protein 299 -0.0229757
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.022538
IFITM1 interferon induced transmembrane protein 1 -0.0218384
RPL35A ribosomal protein L35a -0.0216621
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0209045
RPS19 ribosomal protein S19 -0.020472
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0204572
SP100 SP100 nuclear antigen -0.0204284
RPL36 ribosomal protein L36 -0.020318
WARS1 tryptophanyl-tRNA synthetase 1 -0.0199947
ISG15 ISG15 ubiquitin-like modifier -0.0199421
DPH6 diphthamine biosynthesis 6 -0.0188444
RPL23 ribosomal protein L23 -0.0187649
ENO1 enolase 1, (alpha) -0.0184639
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0182723
PLSCR1 phospholipid scramblase 1 -0.0179471
DEK DEK proto-oncogene -0.0175115
ADGRG6 adhesion G protein-coupled receptor G6 -0.0174659
HMGB1 high mobility group box 1 -0.0168947
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0168699
S100A9 S100 calcium binding protein A9 -0.0166631
PMP22 peripheral myelin protein 22 -0.0166196
PSD3 pleckstrin and Sec7 domain containing 3 -0.0164976
RPLP2 ribosomal protein, large, P2 -0.0162065
TPI1 triosephosphate isomerase 1 -0.0161825
RPL12 ribosomal protein L12 -0.0160768
PNISR PNN-interacting serine/arginine-rich protein -0.0159269
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0155774
RPS6 ribosomal protein S6 -0.0152916
SMC4 structural maintenance of chromosomes 4 -0.0152117
RPL19 ribosomal protein L19 -0.0149783
RPLP1 ribosomal protein, large, P1 -0.014885
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0148279
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0148035
PKM pyruvate kinase, muscle -0.0145711
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0145696
PFN1 profilin 1 -0.0144219
RPS24 ribosomal protein S24 -0.0141412
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0140293
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0139449
PCBP2 poly(rC) binding protein 2 -0.013725
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0136552
RAD51B RAD51 paralog B -0.0136318
CCNL1 cyclin L1 -0.0135592
SRGN serglycin -0.0133637
MT1E metallothionein 1E -0.0132872
FAF1 Fas (TNFRSF6) associated factor 1 -0.0131679
HLA-A major histocompatibility complex, class I, A -0.0130034
RPS14 ribosomal protein S14 -0.0128613
RNF213 ring finger protein 213 -0.0128337
RPL28 ribosomal protein L28 -0.0125599
RPS29 ribosomal protein S29 -0.0124308
RPL35 ribosomal protein L35 -0.0122122
ZNF292 zinc finger protein 292 -0.0119527
RPS5 ribosomal protein S5 -0.0118925
IFITM3 interferon induced transmembrane protein 3 -0.0118118
SAMHD1 SAM domain and HD domain 1 -0.0117157
TMEM123 transmembrane protein 123 -0.0116981
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0114435
RBM25 RNA binding motif protein 25 -0.0114157
RPS20 ribosomal protein S20 -0.011413
BSG basigin (Ok blood group) -0.011313
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0112899
GCLM glutamate-cysteine ligase, modifier subunit -0.0112342
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0110336
RPS21 ribosomal protein S21 -0.010888
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0105401
XAF1 XIAP associated factor 1 -0.0104216
RPL8 ribosomal protein L8 -0.0103905
TAPBP TAP binding protein (tapasin) -0.0103038
MYADM myeloid-associated differentiation marker -0.0102836
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0102263
UBB ubiquitin B -0.0101891
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0100373
ETNK1 ethanolamine kinase 1 -0.0100295
CDK6 cyclin-dependent kinase 6 -0.00998457
RPS2 ribosomal protein S2 -0.00984883