Cyclosporin A_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.22789
EGR1 early growth response 1 0.175981
PABPC1 poly(A) binding protein, cytoplasmic 1 0.164884
COPA coatomer protein complex, subunit alpha 0.10841
PLEC plectin 0.0756827
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0682541
MYH9 myosin, heavy chain 9, non-muscle 0.0616036
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.05744
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0572298
KRT18 keratin 18, type I 0.0567435
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0518754
CSNK1A1 casein kinase 1, alpha 1 0.0498267
KMT2D lysine (K)-specific methyltransferase 2D 0.0496227
ZCCHC7 zinc finger, CCHC domain containing 7 0.0447751
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0444521
NCAPD2 non-SMC condensin I complex, subunit D2 0.0437684
PRRC2A proline-rich coiled-coil 2A 0.0410153
CEP250 centrosomal protein 250kDa 0.0409929
FLNA filamin A, alpha 0.040651
SRRM2 serine/arginine repetitive matrix 2 0.0397933
IGF2 insulin-like growth factor 2 0.0395508
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0395137
TRIO trio Rho guanine nucleotide exchange factor 0.0392419
PTPRF protein tyrosine phosphatase, receptor type, F 0.0371143
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0365167
ARID1A AT rich interactive domain 1A (SWI-like) 0.0359338
TPM3 tropomyosin 3 0.0357592
RPL3 ribosomal protein L3 0.0357231
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0356907
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0345312
NUP58 nucleoporin 58 0.0342687
H1-0 H1.0 linker histone 0.034048
SEC31A SEC31 homolog A (S. cerevisiae) 0.0339511
RAB7A RAB7A, member RAS oncogene family 0.03296
ACTN1 actinin, alpha 1 0.03269
LOC112694756 uncharaterized LOC112694756 0.0325199
MORF4L2 mortality factor 4 like 2 0.0320316
UBAP2L ubiquitin associated protein 2-like 0.0315482
NUMA1 nuclear mitotic apparatus protein 1 0.0308269
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0304974
UBE2H ubiquitin-conjugating enzyme E2H 0.0304752
NONO non-POU domain containing, octamer-binding 0.0298076
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0296836
BAZ2A bromodomain adjacent to zinc finger domain, 2A 0.0295287
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0295038
SREBF2 sterol regulatory element binding transcription factor 2 0.0294039
MSN moesin 0.0278379
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0275426
NCOR2 nuclear receptor corepressor 2 0.0274712
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0272856
CAMTA1 calmodulin binding transcription activator 1 0.0271765
EIF1 eukaryotic translation initiation factor 1 0.0270928
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0269931
PER1 period circadian clock 1 0.0269805
MLEC malectin 0.026963
FUS FUS RNA binding protein 0.0268582
SEPTIN2 septin 2 0.0268398
CANX calnexin 0.026753
USP36 ubiquitin specific peptidase 36 0.0266063
ATXN2 ataxin 2 0.0261116
MINK1 misshapen-like kinase 1 0.0259621
YBX1 Y box binding protein 1 0.0254883
CALR calreticulin 0.0254767
HELZ helicase with zinc finger 0.0253105
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0252873
RBMX RNA binding motif protein, X-linked 0.025276
HYOU1 hypoxia up-regulated 1 0.0251857
WNK1 WNK lysine deficient protein kinase 1 0.0251777
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0250572
TCOF1 Treacher Collins-Franceschetti syndrome 1 0.024921
TMEM39A transmembrane protein 39A 0.0248388
RRP12 ribosomal RNA processing 12 homolog (S. cerevisiae) 0.024623
KDM6B lysine (K)-specific demethylase 6B 0.0244496
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0241311
ARFGAP1 ADP-ribosylation factor GTPase activating protein 1 0.024
MACF1 microtubule-actin crosslinking factor 1 0.0239831
GTF2A1 general transcription factor IIA, 1, 19/37kDa 0.023929
TFG TRK-fused gene 0.0238974
MKI67 marker of proliferation Ki-67 0.0238194
COPG1 coatomer protein complex, subunit gamma 1 0.0237695
RLIM ring finger protein, LIM domain interacting 0.0237482
RAB1A RAB1A, member RAS oncogene family 0.0234482
RICTOR RPTOR independent companion of MTOR, complex 2 0.0232996
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0232405
DAND5 DAN domain family member 5, BMP antagonist 0.0232023
BRD2 bromodomain containing 2 0.0231579
CCDC200 coiled-coil domain containing 200 0.0229783
ANXA2 annexin A2 0.022971
DCAF8 DDB1 and CUL4 associated factor 8 0.0229686
RACK1 receptor for activated C kinase 1 0.0228339
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0228241
TMED2 transmembrane emp24 domain trafficking protein 2 0.0227062
TNIP1 TNFAIP3 interacting protein 1 0.0226976
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0226562
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0226385
WASF2 WAS protein family, member 2 0.0225171
MEF2D myocyte enhancer factor 2D 0.0224157
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0223973
SMAD3 SMAD family member 3 0.0223858
SHB Src homology 2 domain containing adaptor protein B 0.0220075

decreased expression

Symbol Name Standardized Value
TFPI2 tissue factor pathway inhibitor 2 -0.24515
AKAP12 A kinase (PRKA) anchor protein 12 -0.201698
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.103399
GRAMD1B GRAM domain containing 1B -0.100525
TMSB10 thymosin beta 10 -0.0950117
UBC ubiquitin C -0.0816085
VIM vimentin -0.0708743
YBX3 Y box binding protein 3 -0.0694832
TM4SF1 transmembrane 4 L six family member 1 -0.0680053
RPS27A ribosomal protein S27a -0.0661673
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0655469
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.064831
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0640761
MYL12B myosin, light chain 12B, regulatory -0.0592634
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0568267
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0537523
OSMR oncostatin M receptor -0.0532025
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0488763
AHNAK AHNAK nucleoprotein -0.0487015
RIMS2 regulating synaptic membrane exocytosis 2 -0.0483
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0475802
IGF1R insulin-like growth factor 1 receptor -0.0473026
IFI6 interferon, alpha-inducible protein 6 -0.046462
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0445638
TPT1 tumor protein, translationally-controlled 1 -0.0433702
DOCK5 dedicator of cytokinesis 5 -0.0407225
EIF5B eukaryotic translation initiation factor 5B -0.0403501
CDK17 cyclin-dependent kinase 17 -0.0403224
ENO1 enolase 1, (alpha) -0.0396676
RTN4 reticulon 4 -0.0394997
NIPBL Nipped-B homolog (Drosophila) -0.0391174
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.0382732
TRIP12 thyroid hormone receptor interactor 12 -0.0361833
KTN1 kinectin 1 (kinesin receptor) -0.0357469
WDPCP WD repeat containing planar cell polarity effector -0.0353878
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0348366
TXNRD1 thioredoxin reductase 1 -0.0344765
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0331646
RPS2 ribosomal protein S2 -0.0328356
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0328029
DEK DEK proto-oncogene -0.0325267
CCND1 cyclin D1 -0.0322972
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0321112
PTMA prothymosin, alpha -0.0320986
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0320821
PDE4D phosphodiesterase 4D, cAMP-specific -0.0320639
DNAH14 dynein, axonemal, heavy chain 14 -0.0320268
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0319823
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0316764
ZBTB20 zinc finger and BTB domain containing 20 -0.0315248
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0313567
HLA-B major histocompatibility complex, class I, B -0.0310294
RPL26 ribosomal protein L26 -0.0308959
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0308764
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0306928
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0305824
RPS15 ribosomal protein S15 -0.0303506
RPS29 ribosomal protein S29 -0.0295852
CENPF centromere protein F, 350/400kDa -0.0294782
RPLP1 ribosomal protein, large, P1 -0.0294067
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0293781
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0293483
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0293189
SPIDR scaffolding protein involved in DNA repair -0.0291896
IER3 immediate early response 3 -0.0290979
CCND2 cyclin D2 -0.0288015
RPS24 ribosomal protein S24 -0.0285947
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0282544
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0281885
THSD4 thrombospondin, type I, domain containing 4 -0.0277103
RPS21 ribosomal protein S21 -0.0274423
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0272126
TUBA1B tubulin, alpha 1b -0.0270541
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0270118
BASP1 brain abundant, membrane attached signal protein 1 -0.0267441
PCBP2 poly(rC) binding protein 2 -0.0267036
STAU1 staufen double-stranded RNA binding protein 1 -0.0266968
PDE10A phosphodiesterase 10A -0.0266208
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0264398
ATP11A ATPase, class VI, type 11A -0.0262005
RPL9 ribosomal protein L9 -0.0260243
CAVIN1 caveolae associated protein 1 -0.0259249
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0258601
RRM2 ribonucleotide reductase M2 -0.0254391
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0253446
EXOC4 exocyst complex component 4 -0.0253398
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0252919
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0252441
RPLP2 ribosomal protein, large, P2 -0.0250472
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0246696
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0246441
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0246145
SSH2 slingshot protein phosphatase 2 -0.0244742
SMC4 structural maintenance of chromosomes 4 -0.0244652
ZNF638 zinc finger protein 638 -0.0243868
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0243431
NAP1L1 nucleosome assembly protein 1-like 1 -0.0242612
WDR70 WD repeat domain 70 -0.0242239
EFNA5 ephrin-A5 -0.023376
CHD4 chromodomain helicase DNA binding protein 4 -0.0231164