Cyclosporin A_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VEGFA vascular endothelial growth factor A 0.141783
NDRG1 N-myc downstream regulated 1 0.137224
PLEC plectin 0.129819
MYH9 myosin, heavy chain 9, non-muscle 0.129805
BHLHE40 basic helix-loop-helix family, member e40 0.122531
PABPC1 poly(A) binding protein, cytoplasmic 1 0.12114
FN1 fibronectin 1 0.102499
G0S2 G0/G1 switch 2 0.101331
EEF2 eukaryotic translation elongation factor 2 0.0843086
GRB10 growth factor receptor-bound protein 10 0.0732145
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) 0.0639477
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0628951
LAMB3 laminin, beta 3 0.0619909
UPP1 uridine phosphorylase 1 0.053202
NAMPT nicotinamide phosphoribosyltransferase 0.0528166
TNIP1 TNFAIP3 interacting protein 1 0.0513298
LAMC2 laminin, gamma 2 0.0483924
ARRDC3 arrestin domain containing 3 0.047494
RACK1 receptor for activated C kinase 1 0.0467418
FNDC3B fibronectin type III domain containing 3B 0.0451038
FAM13A family with sequence similarity 13, member A 0.0440624
ELL2 elongation factor, RNA polymerase II, 2 0.0428768
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0419923
TSC22D2 TSC22 domain family, member 2 0.0406249
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.039727
KRT18 keratin 18, type I 0.0397038
COPA coatomer protein complex, subunit alpha 0.0393565
MSN moesin 0.0389593
UBA6 ubiquitin-like modifier activating enzyme 6 0.038807
RPL3 ribosomal protein L3 0.0379743
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.037826
EGR1 early growth response 1 0.0358183
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0356749
TFG TRK-fused gene 0.035596
FOSL1 FOS-like antigen 1 0.0350876
QKI QKI, KH domain containing, RNA binding 0.0349069
DUSP10 dual specificity phosphatase 10 0.034812
AHDC1 AT hook, DNA binding motif, containing 1 0.0345141
YBX1 Y box binding protein 1 0.0344099
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0342147
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.033677
ANXA5 annexin A5 0.0336353
TRA2B transformer 2 beta homolog (Drosophila) 0.033529
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0331762
HSPA8 heat shock 70kDa protein 8 0.033039
FLNA filamin A, alpha 0.0324148
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0323522
RAD23B RAD23 homolog B (S. cerevisiae) 0.0321598
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0320685
KMT2E lysine (K)-specific methyltransferase 2E 0.031344
RAD21 RAD21 homolog (S. pombe) 0.0308698
TMED2 transmembrane emp24 domain trafficking protein 2 0.030256
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0296862
MED15 mediator complex subunit 15 0.0293178
ANXA1 annexin A1 0.0292685
NUP58 nucleoporin 58 0.0291001
PLAU plasminogen activator, urokinase 0.029023
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.028185
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0281479
NONO non-POU domain containing, octamer-binding 0.0275408
CCNL1 cyclin L1 0.0269183
MARCHF6 membrane associated ring-CH-type finger 6 0.026698
NUMA1 nuclear mitotic apparatus protein 1 0.0266757
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0262525
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0262419
LRATD2 LRAT domain containing 2 0.0261607
WTAP Wilms tumor 1 associated protein 0.0259958
MXD1 MAX dimerization protein 1 0.0256875
FLNB filamin B, beta 0.0253554
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0249558
MKI67 marker of proliferation Ki-67 0.0245922
TRIO trio Rho guanine nucleotide exchange factor 0.0242801
RPLP0 ribosomal protein, large, P0 0.0238145
PPARD peroxisome proliferator-activated receptor delta 0.0237527
ERRFI1 ERBB receptor feedback inhibitor 1 0.0236218
FEM1C fem-1 homolog c (C. elegans) 0.0233252
DBN1 drebrin 1 0.0229404
RNF145 ring finger protein 145 0.022797
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0225608
SREBF2 sterol regulatory element binding transcription factor 2 0.022556
ANXA2 annexin A2 0.0217371
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0215559
LENG8 leukocyte receptor cluster (LRC) member 8 0.0214165
ARL5B ADP-ribosylation factor-like 5B 0.0203968
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0203935
TMED9 transmembrane emp24 protein transport domain containing 9 0.0203486
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.020325
PLP2 proteolipid protein 2 (colonic epithelium-enriched) 0.0202565
RPS10 ribosomal protein S10 0.0199931
DDIT4 DNA-damage-inducible transcript 4 0.0199152
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0197184
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0195486
WAC WW domain containing adaptor with coiled-coil 0.0189487
B2M beta-2-microglobulin 0.0189411
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0185796
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0183043
GARS1 glycyl-tRNA synthetase 1 0.0182024
SPAG5 sperm associated antigen 5 0.0180573
HMGB2 high mobility group box 2 0.0178938
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0175744

decreased expression

Symbol Name Standardized Value
UBC ubiquitin C -0.219083
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.212699
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.178148
TMSB10 thymosin beta 10 -0.141129
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.137582
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.122834
AHNAK AHNAK nucleoprotein -0.109817
POTEF POTE ankyrin domain family, member F -0.109649
S100A6 S100 calcium binding protein A6 -0.0916418
PTMA prothymosin, alpha -0.0863042
ENO1 enolase 1, (alpha) -0.0846259
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0835296
LPP LIM domain containing preferred translocation partner in lipoma -0.0780296
FBXO32 F-box protein 32 -0.07769
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0706046
EXT1 exostosin glycosyltransferase 1 -0.0702912
IFI27 interferon, alpha-inducible protein 27 -0.0682542
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0678964
TPT1 tumor protein, translationally-controlled 1 -0.0651336
LDHA lactate dehydrogenase A -0.0649976
RPS27A ribosomal protein S27a -0.0634749
IFI6 interferon, alpha-inducible protein 6 -0.0600722
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0597612
LIMCH1 LIM and calponin homology domains 1 -0.0591769
CCND1 cyclin D1 -0.0558551
EFNA5 ephrin-A5 -0.0541298
IFI16 interferon, gamma-inducible protein 16 -0.0538317
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.053446
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0506184
ZBTB20 zinc finger and BTB domain containing 20 -0.0476586
EPCAM epithelial cell adhesion molecule -0.0452627
VIM vimentin -0.0449398
STAT1 signal transducer and activator of transcription 1, 91kDa -0.044837
WSB1 WD repeat and SOCS box containing 1 -0.043402
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0427653
CD2AP CD2-associated protein -0.040952
TPM4 tropomyosin 4 -0.0408668
RPLP2 ribosomal protein, large, P2 -0.0407027
MAP4 microtubule-associated protein 4 -0.0402916
MAP1B microtubule-associated protein 1B -0.0395318
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0391716
RNF213 ring finger protein 213 -0.038259
DSG2 desmoglein 2 -0.0377221
RBM25 RNA binding motif protein 25 -0.0376503
RPS24 ribosomal protein S24 -0.0371227
TM4SF1 transmembrane 4 L six family member 1 -0.0371022
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0359029
LMO7 LIM domain 7 -0.0357535
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0351955
PCBP2 poly(rC) binding protein 2 -0.0348664
SOX4 SRY (sex determining region Y)-box 4 -0.0345445
MDK midkine (neurite growth-promoting factor 2) -0.0345444
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0344857
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0344598
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0342755
PDIA4 protein disulfide isomerase family A, member 4 -0.03416
FTL ferritin, light polypeptide -0.0339803
F11R F11 receptor -0.0339671
IFITM1 interferon induced transmembrane protein 1 -0.03375
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0337233
SAMD4A sterile alpha motif domain containing 4A -0.0330681
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0328892
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0328266
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa -0.0328075
IFIH1 interferon induced with helicase C domain 1 -0.0327416
RBM47 RNA binding motif protein 47 -0.031785
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0317033
RAD51B RAD51 paralog B -0.0314576
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0314385
SDC4 syndecan 4 -0.0312761
FBXO34 F-box protein 34 -0.0308295
MYO1E myosin IE -0.0306098
IFITM3 interferon induced transmembrane protein 3 -0.0303239
RHOA ras homolog family member A -0.0299527
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0299003
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0297333
ERBIN erbb2 interacting protein -0.0296161
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0294026
RPS29 ribosomal protein S29 -0.029356
HLA-A major histocompatibility complex, class I, A -0.0290898
NF1 neurofibromin 1 -0.0280895
HLA-E major histocompatibility complex, class I, E -0.0279721
FHIT fragile histidine triad -0.0279024
ETV6 ets variant 6 -0.0278533
GNAS GNAS complex locus -0.027433
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0272504
SPDYA speedy/RINGO cell cycle regulator family member A -0.0272193
RPS25 ribosomal protein S25 -0.0266822
GOLGB1 golgin B1 -0.0266178
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.026573
ARHGAP5 Rho GTPase activating protein 5 -0.0265476
RPLP1 ribosomal protein, large, P1 -0.0265209
FRMD5 FERM domain containing 5 -0.0265124
BZW1 basic leucine zipper and W2 domains 1 -0.0264452
ISG15 ISG15 ubiquitin-like modifier -0.0263731
CSTB cystatin B (stefin B) -0.0263272
MX2 MX dynamin-like GTPase 2 -0.0260877
ARB2A ARB2 cotranscriptional regulator A -0.0259074
RPS13 ribosomal protein S13 -0.0256653
BLZF1 basic leucine zipper nuclear factor 1 -0.0256522