Cyclosporin A_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZNF292 zinc finger protein 292 0.0967335
MYH9 myosin, heavy chain 9, non-muscle 0.0852509
DST dystonin 0.0850695
KMT2C lysine (K)-specific methyltransferase 2C 0.0671363
EEF2 eukaryotic translation elongation factor 2 0.0642431
HDAC9 histone deacetylase 9 0.0627256
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0562276
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0557936
SPAG9 sperm associated antigen 9 0.0549414
MYO10 myosin X 0.0548892
APP amyloid beta (A4) precursor protein 0.0530233
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.051655
MB21D2 Mab-21 domain containing 2 0.0510415
FBXO11 F-box protein 11 0.0492285
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0479659
FNDC3B fibronectin type III domain containing 3B 0.0473583
TBC1D12 TBC1 domain family, member 12 0.0421507
WDR43 WD repeat domain 43 0.0421504
RBM20 RNA binding motif protein 20 0.0416548
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0414777
TRIO trio Rho guanine nucleotide exchange factor 0.0414169
QKI QKI, KH domain containing, RNA binding 0.0400971
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0398044
NCKAP1 NCK-associated protein 1 0.0394491
PDIA6 protein disulfide isomerase family A, member 6 0.0387327
RPL3 ribosomal protein L3 0.03789
KMT2E lysine (K)-specific methyltransferase 2E 0.0370133
FUS FUS RNA binding protein 0.0363342
CFL2 cofilin 2 (muscle) 0.035973
MACF1 microtubule-actin crosslinking factor 1 0.0354519
KDM3A lysine (K)-specific demethylase 3A 0.0353563
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0353183
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0352935
NONO non-POU domain containing, octamer-binding 0.0349688
SET SET nuclear proto-oncogene 0.0343579
MED13L mediator complex subunit 13-like 0.0343352
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0343338
PICALM phosphatidylinositol binding clathrin assembly protein 0.0343201
YAP1 Yes-associated protein 1 0.0342516
NCOR2 nuclear receptor corepressor 2 0.0341087
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0336369
ENAH enabled homolog (Drosophila) 0.0335989
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.03348
ITGAV integrin, alpha V 0.0319277
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0315234
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0314699
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0308269
ZFAND3 zinc finger, AN1-type domain 3 0.030538
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0300254
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0296156
VMP1 vacuole membrane protein 1 0.0295779
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0294225
RAB7A RAB7A, member RAS oncogene family 0.0292603
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0291741
ANXA5 annexin A5 0.0288655
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0288076
TPM3 tropomyosin 3 0.0283995
APLP2 amyloid beta (A4) precursor-like protein 2 0.028261
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0279225
CAMKMT calmodulin-lysine N-methyltransferase 0.0279203
MYH10 myosin, heavy chain 10, non-muscle 0.0278898
GAB2 GRB2-associated binding protein 2 0.0278091
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0277551
ADGRV1 adhesion G protein-coupled receptor V1 0.0277318
SUB1 SUB1 homolog (S. cerevisiae) 0.0277133
SIK3 SIK family kinase 3 0.0276458
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0276121
ZEB2 zinc finger E-box binding homeobox 2 0.0271809
SRP54 signal recognition particle 54kDa 0.0268769
VEGFA vascular endothelial growth factor A 0.0268627
SYT1 synaptotagmin I 0.0266567
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0261481
PNN pinin, desmosome associated protein 0.0256486
FEM1C fem-1 homolog c (C. elegans) 0.0255069
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0252326
BHLHE40 basic helix-loop-helix family, member e40 0.0249118
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 0.0248352
RBM33 RNA binding motif protein 33 0.0246497
KTN1 kinectin 1 (kinesin receptor) 0.0245966
CALR calreticulin 0.0244379
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0244035
KIF1B kinesin family member 1B 0.0234754
ANKRD33B ankyrin repeat domain 33B 0.0233691
TSC22D2 TSC22 domain family, member 2 0.0230793
DLX2 distal-less homeobox 2 0.0230146
H1-0 H1.0 linker histone 0.022788
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0227297
PGAP1 post-GPI attachment to proteins 1 0.0227086
DCTN1 dynactin 1 0.0226041
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0225685
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.022336
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 0.0222479
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0221908
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0221697
ITSN1 intersectin 1 (SH3 domain protein) 0.0220668
MSN moesin 0.0220562
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0220319
AFAP1 actin filament associated protein 1 0.0220196
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0219263
WDR62 WD repeat domain 62 0.0218907

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.136955
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.12516
CDH10 cadherin 10, type 2 (T2-cadherin) -0.123408
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.119625
PCDH9 protocadherin 9 -0.105263
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.104468
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.10335
COL11A1 collagen, type XI, alpha 1 -0.103112
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.084218
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0802144
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0800319
RPLP1 ribosomal protein, large, P1 -0.079578
GPC3 glypican 3 -0.0764744
TMSB10 thymosin beta 10 -0.0755761
PEG10 paternally expressed 10 -0.0677881
PCLO piccolo presynaptic cytomatrix protein -0.0625553
GNAS GNAS complex locus -0.0612679
MEIS2 Meis homeobox 2 -0.0590408
RPS16 ribosomal protein S16 -0.0561327
ACTG1 actin gamma 1 -0.0543061
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0519789
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0512958
MYL12B myosin, light chain 12B, regulatory -0.0504122
CADM2 cell adhesion molecule 2 -0.0493621
DEK DEK proto-oncogene -0.047116
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0456579
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0446302
RPS6 ribosomal protein S6 -0.0435781
CENPF centromere protein F, 350/400kDa -0.0435308
MKI67 marker of proliferation Ki-67 -0.0422472
COL3A1 collagen, type III, alpha 1 -0.0419532
RPS8 ribosomal protein S8 -0.0413268
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0395814
CDH19 cadherin 19, type 2 -0.0393481
RPS24 ribosomal protein S24 -0.0381911
DPYD dihydropyrimidine dehydrogenase -0.036416
RPL11 ribosomal protein L11 -0.0360453
RBM25 RNA binding motif protein 25 -0.0357822
PBX3 pre-B-cell leukemia homeobox 3 -0.0356681
HMGB1 high mobility group box 1 -0.0356493
METAP2 methionyl aminopeptidase 2 -0.0349521
RPS19 ribosomal protein S19 -0.0348952
FTL ferritin, light polypeptide -0.0343559
RPL19 ribosomal protein L19 -0.0340962
PRDX1 peroxiredoxin 1 -0.0339801
MRPS30 mitochondrial ribosomal protein S30 -0.033433
LOC102724023 ES1 protein homolog, mitochondrial -0.03332
CNRIP1 cannabinoid receptor interacting protein 1 -0.0327832
PTMA prothymosin, alpha -0.0325519
TRPS1 trichorhinophalangeal syndrome I -0.0322494
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0322277
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0320423
MTDH metadherin -0.0319182
FOXP2 forkhead box P2 -0.0314184
CAVIN1 caveolae associated protein 1 -0.0300654
PRKD1 protein kinase D1 -0.0295222
BTBD3 BTB (POZ) domain containing 3 -0.0294669
GOLGA4 golgin A4 -0.029458
COL1A2 collagen, type I, alpha 2 -0.0292467
TPT1 tumor protein, translationally-controlled 1 -0.0290837
NIPBL Nipped-B homolog (Drosophila) -0.0288904
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0288052
TUT4 terminal uridylyl transferase 4 -0.0287517
WASF2 WAS protein family, member 2 -0.0283077
HSPB1 heat shock 27kDa protein 1 -0.0283021
RSL1D1 ribosomal L1 domain containing 1 -0.0282766
NCOR1 nuclear receptor corepressor 1 -0.0275423
RPL12 ribosomal protein L12 -0.0274506
ACBD3 acyl-CoA binding domain containing 3 -0.0273439
ZFR zinc finger RNA binding protein -0.026988
RTN3 reticulon 3 -0.026862
RFPL4B ret finger protein-like 4B -0.0266976
SLC30A8 solute carrier family 30 (zinc transporter), member 8 -0.0264473
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0264374
SNX6 sorting nexin 6 -0.0261897
KNL1 kinetochore scaffold 1 -0.0260245
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0257945
ZC3H13 zinc finger CCCH-type containing 13 -0.0256224
NOP58 NOP58 ribonucleoprotein -0.0256143
PIBF1 progesterone immunomodulatory binding factor 1 -0.0253733
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0252672
UBB ubiquitin B -0.0249933
ARHGAP15 Rho GTPase activating protein 15 -0.0248487
NDRG1 N-myc downstream regulated 1 -0.0246099
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0243716
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0243485
TPR translocated promoter region, nuclear basket protein -0.0243091
RPS21 ribosomal protein S21 -0.0240929
RPS2 ribosomal protein S2 -0.0239562
RPL8 ribosomal protein L8 -0.0239516
GPATCH8 G patch domain containing 8 -0.0239115
CDK12 cyclin-dependent kinase 12 -0.0238993
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0238576
LIN28B lin-28 homolog B (C. elegans) -0.0236369
CAPNS1 calpain, small subunit 1 -0.0234753
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0234578
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0234269
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0234087
BSG basigin (Ok blood group) -0.0233545
SSH2 slingshot protein phosphatase 2 -0.0231599