Cyclosporin A_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.158472
VEGFA vascular endothelial growth factor A 0.116161
EEF2 eukaryotic translation elongation factor 2 0.108396
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.10205
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0981193
UGCG UDP-glucose ceramide glucosyltransferase 0.0939448
FN1 fibronectin 1 0.0939229
NAV2 neuron navigator 2 0.0905317
NAMPT nicotinamide phosphoribosyltransferase 0.0856737
SOD2 superoxide dismutase 2, mitochondrial 0.080821
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0743284
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0675155
ELL2 elongation factor, RNA polymerase II, 2 0.0647805
ADM adrenomedullin 0.060425
ARRDC3 arrestin domain containing 3 0.0589263
NDRG1 N-myc downstream regulated 1 0.0544349
OGA O-GlcNAcase 0.0509304
MKI67 marker of proliferation Ki-67 0.0494974
SFTPA2 surfactant protein A2 0.0478796
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0435963
ATP13A3 ATPase type 13A3 0.0422991
RB1CC1 RB1-inducible coiled-coil 1 0.0411915
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0404532
ANLN anillin, actin binding protein 0.0403371
SPAG9 sperm associated antigen 9 0.0401375
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0401286
B2M beta-2-microglobulin 0.0387739
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0382187
GOLGA4 golgin A4 0.0377446
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0376294
FNDC3B fibronectin type III domain containing 3B 0.0369501
MXI1 MAX interactor 1, dimerization protein 0.0366
ZNF292 zinc finger protein 292 0.0363578
WTAP Wilms tumor 1 associated protein 0.0360469
FLNB filamin B, beta 0.035807
WDFY1 WD repeat and FYVE domain containing 1 0.0353753
UBA6 ubiquitin-like modifier activating enzyme 6 0.0353497
MSN moesin 0.0352009
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0349791
NT5C2 5'-nucleotidase, cytosolic II 0.0346823
ESYT2 extended synaptotagmin-like protein 2 0.0339176
PPARD peroxisome proliferator-activated receptor delta 0.0336376
HELZ helicase with zinc finger 0.032944
LOC112694756 uncharaterized LOC112694756 0.0328025
NONO non-POU domain containing, octamer-binding 0.0324864
CENPF centromere protein F, 350/400kDa 0.0322133
TNIP1 TNFAIP3 interacting protein 1 0.0315364
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0312395
SPTBN1 spectrin, beta, non-erythrocytic 1 0.031203
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0306627
USP9X ubiquitin specific peptidase 9, X-linked 0.0305957
APP amyloid beta (A4) precursor protein 0.0301775
KIF4A kinesin family member 4A 0.0300127
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0299381
RPLP0 ribosomal protein, large, P0 0.0298307
STC1 stanniocalcin 1 0.0294786
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.029236
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0292195
CDK19 cyclin-dependent kinase 19 0.0285655
CKAP5 cytoskeleton associated protein 5 0.0283527
EIF1 eukaryotic translation initiation factor 1 0.0275274
KLF6 Kruppel-like factor 6 0.0272283
LAMP2 lysosomal-associated membrane protein 2 0.0271373
JMJD1C jumonji domain containing 1C 0.0266833
UBE2H ubiquitin-conjugating enzyme E2H 0.0266321
FLNA filamin A, alpha 0.0265852
ANXA2 annexin A2 0.0265735
ICAM1 intercellular adhesion molecule 1 0.026311
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0261406
KDM3A lysine (K)-specific demethylase 3A 0.0260703
WSB1 WD repeat and SOCS box containing 1 0.0257546
ZMIZ1 zinc finger, MIZ-type containing 1 0.0257431
FNIP1 folliculin interacting protein 1 0.0257092
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0255346
RAB1A RAB1A, member RAS oncogene family 0.0252557
DIAPH3 diaphanous-related formin 3 0.0245359
PTBP3 polypyrimidine tract binding protein 3 0.024042
DENND5A DENN/MADD domain containing 5A 0.0238434
USP37 ubiquitin specific peptidase 37 0.0237379
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0236377
LCORL ligand dependent nuclear receptor corepressor-like 0.0234347
COPA coatomer protein complex, subunit alpha 0.0228708
TPX2 TPX2, microtubule-associated 0.0224079
SNX9 sorting nexin 9 0.0220417
EZR ezrin 0.0219404
BHLHE40 basic helix-loop-helix family, member e40 0.0215726
TSC22D2 TSC22 domain family, member 2 0.0212438
FMNL2 formin-like 2 0.0210808
NGLY1 N-glycanase 1 0.021054
PTMA prothymosin, alpha 0.0207224
MATR3 matrin 3 0.0207062
FOXO3 forkhead box O3 0.0206444
CEP250 centrosomal protein 250kDa 0.0205637
PHIP pleckstrin homology domain interacting protein 0.0205576
ANKRD28 ankyrin repeat domain 28 0.0204628
MARCHF6 membrane associated ring-CH-type finger 6 0.0203904
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0203471
DSCAM Down syndrome cell adhesion molecule 0.0202711
WDR45B WD repeat domain 45B 0.0201588
APLP2 amyloid beta (A4) precursor-like protein 2 0.0201226

decreased expression

Symbol Name Standardized Value
FRMD4A FERM domain containing 4A -0.190094
GLIS3 GLIS family zinc finger 3 -0.162889
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.136114
HMGA2 high mobility group AT-hook 2 -0.0895641
VCL vinculin -0.0756274
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0721263
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0713907
EXT1 exostosin glycosyltransferase 1 -0.070768
BICC1 BicC family RNA binding protein 1 -0.0679597
IGFBP3 insulin-like growth factor binding protein 3 -0.063126
IER3 immediate early response 3 -0.0597001
DST dystonin -0.0563553
VCAN versican -0.0559694
CDH13 cadherin 13 -0.0549405
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0495108
PTPRK protein tyrosine phosphatase, receptor type, K -0.0477748
ASPH aspartate beta-hydroxylase -0.0455395
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0451749
NAV1 neuron navigator 1 -0.044534
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0437816
AHNAK AHNAK nucleoprotein -0.0433278
RAI14 retinoic acid induced 14 -0.0423363
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0416356
COL6A3 collagen, type VI, alpha 3 -0.0407368
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0403187
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0395998
TENM2 teneurin transmembrane protein 2 -0.0395206
EGFR epidermal growth factor receptor -0.0383582
NABP1 nucleic acid binding protein 1 -0.0373917
TMSB10 thymosin beta 10 -0.0373784
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0373701
SFRP1 secreted frizzled-related protein 1 -0.0367177
TPM1 tropomyosin 1 (alpha) -0.0347427
DIAPH2 diaphanous-related formin 2 -0.0345557
ZBTB20 zinc finger and BTB domain containing 20 -0.0343467
SOX5 SRY (sex determining region Y)-box 5 -0.0334574
SLC35F3 solute carrier family 35, member F3 -0.033302
MAML2 mastermind-like 2 (Drosophila) -0.0332519
TNS3 tensin 3 -0.0323732
GPC6 glypican 6 -0.0321646
ADAM12 ADAM metallopeptidase domain 12 -0.0319465
TMEM132D transmembrane protein 132D -0.0314486
SAMD3 sterile alpha motif domain containing 3 -0.0302291
PSD3 pleckstrin and Sec7 domain containing 3 -0.0298418
EFNA5 ephrin-A5 -0.0295005
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0283984
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0282544
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A -0.0281935
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0279558
FTL ferritin, light polypeptide -0.027621
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0275186
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.027117
INTS6 integrator complex subunit 6 -0.0270094
COL1A1 collagen, type I, alpha 1 -0.0269948
ZMYND8 zinc finger, MYND-type containing 8 -0.0265838
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0262142
FRMPD4 FERM and PDZ domain containing 4 -0.0259528
NCKAP5 NCK-associated protein 5 -0.0257388
CTSD cathepsin D -0.0255276
RAD51B RAD51 paralog B -0.0253318
TPT1 tumor protein, translationally-controlled 1 -0.0250692
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0248542
UTRN utrophin -0.0242312
WFDC10B WAP four-disulfide core domain 10B -0.0239739
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0237789
EHBP1 EH domain binding protein 1 -0.0235286
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0235172
FBXL7 F-box and leucine-rich repeat protein 7 -0.0234916
LOX lysyl oxidase -0.0234652
RNF213 ring finger protein 213 -0.0233895
COL5A1 collagen, type V, alpha 1 -0.0224785
DPYD dihydropyrimidine dehydrogenase -0.0221932
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0216532
IFI16 interferon, gamma-inducible protein 16 -0.02154
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.021297
AKAP12 A kinase (PRKA) anchor protein 12 -0.0209274
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0209232
BNC2 basonuclin 2 -0.0208648
SDK1 sidekick cell adhesion molecule 1 -0.0207905
LPP LIM domain containing preferred translocation partner in lipoma -0.0206919
PRKCA protein kinase C, alpha -0.0202935
SVIL supervillin -0.0201788
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0200721
RRBP1 ribosome binding protein 1 -0.0199736
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0197641
CNTN6 contactin 6 -0.0195162
AUTS2 autism susceptibility candidate 2 -0.0194691
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0194592
SMYD3 SET and MYND domain containing 3 -0.0194395
COL6A2 collagen, type VI, alpha 2 -0.0191462
PRR16 proline rich 16 -0.0191267
SLC38A1 solute carrier family 38, member 1 -0.0189644
NALF1 NALCN channel auxiliary factor 1 -0.0189581
PRKG1 protein kinase, cGMP-dependent, type I -0.0187239
WDR27 WD repeat domain 27 -0.0187027
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0184779
EXOC4 exocyst complex component 4 -0.0181719
ARHGAP24 Rho GTPase activating protein 24 -0.0180792
CLMP CXADR-like membrane protein -0.0177425
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.017728