Cyclosporin A_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase 0.125551
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.115325
PRRC2C proline-rich coiled-coil 2C 0.112504
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0974228
VEGFA vascular endothelial growth factor A 0.0917699
RICTOR RPTOR independent companion of MTOR, complex 2 0.0813982
RNF145 ring finger protein 145 0.0748707
MYH9 myosin, heavy chain 9, non-muscle 0.0711738
AHR aryl hydrocarbon receptor 0.0673468
EPS8 epidermal growth factor receptor pathway substrate 8 0.0652397
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0628259
MCTP2 multiple C2 domains, transmembrane 2 0.0617006
FTH1 ferritin, heavy polypeptide 1 0.0600932
MT2A metallothionein 2A 0.0581342
ZNF292 zinc finger protein 292 0.0566993
BHLHE40 basic helix-loop-helix family, member e40 0.0563422
WAC WW domain containing adaptor with coiled-coil 0.0544206
COPA coatomer protein complex, subunit alpha 0.0530431
TNIP1 TNFAIP3 interacting protein 1 0.0528832
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0527028
TMEM156 transmembrane protein 156 0.0524896
MKI67 marker of proliferation Ki-67 0.0522631
EEF2 eukaryotic translation elongation factor 2 0.0501178
OGA O-GlcNAcase 0.0495388
FNDC3B fibronectin type III domain containing 3B 0.0493361
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0489956
NUP58 nucleoporin 58 0.0489837
SMAD3 SMAD family member 3 0.0479122
FAT1 FAT atypical cadherin 1 0.0470531
PTK2 protein tyrosine kinase 2 0.0470237
RACK1 receptor for activated C kinase 1 0.0464723
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0464344
RAD21 RAD21 homolog (S. pombe) 0.0461664
CAB39 calcium binding protein 39 0.0460289
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0457234
GOLGA4 golgin A4 0.0455753
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0452828
NEK7 NIMA-related kinase 7 0.0452551
HELZ helicase with zinc finger 0.0452315
TXNRD1 thioredoxin reductase 1 0.0449486
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0449203
UGCG UDP-glucose ceramide glucosyltransferase 0.0429656
KTN1 kinectin 1 (kinesin receptor) 0.042951
TRIO trio Rho guanine nucleotide exchange factor 0.0428559
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0418782
FNBP1 formin binding protein 1 0.0410772
UBA6 ubiquitin-like modifier activating enzyme 6 0.0404904
OSMR oncostatin M receptor 0.0404318
CD109 CD109 molecule 0.0396059
APP amyloid beta (A4) precursor protein 0.0392976
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.037951
TENT2 terminal nucleotidyltransferase 2 0.037549
PELO pelota homolog (Drosophila) 0.0375153
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0374568
CANX calnexin 0.0374269
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0374129
PUM2 pumilio RNA-binding family member 2 0.0369755
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0368165
FLNA filamin A, alpha 0.036529
B2M beta-2-microglobulin 0.0364855
NRP1 neuropilin 1 0.0363138
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0361114
ZFAND3 zinc finger, AN1-type domain 3 0.0360315
FAM13A family with sequence similarity 13, member A 0.0356636
TPM3 tropomyosin 3 0.0354999
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0352701
ELL2 elongation factor, RNA polymerase II, 2 0.0352542
RAB8B RAB8B, member RAS oncogene family 0.0351326
SEPTIN7 septin 7 0.0351219
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0345886
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0343141
CALR calreticulin 0.0339904
KMT2C lysine (K)-specific methyltransferase 2C 0.0338332
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0338003
KMT2E lysine (K)-specific methyltransferase 2E 0.033457
PNISR PNN-interacting serine/arginine-rich protein 0.0330585
ANKRD11 ankyrin repeat domain 11 0.0328451
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0328275
NRIP1 nuclear receptor interacting protein 1 0.0327947
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0327272
RAD23B RAD23 homolog B (S. cerevisiae) 0.0326861
RUNX2 runt-related transcription factor 2 0.0326624
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0321112
HDGF hepatoma-derived growth factor 0.0318025
YBX1 Y box binding protein 1 0.0316103
CD44 CD44 molecule (Indian blood group) 0.0312146
SPAG9 sperm associated antigen 9 0.0311388
PNN pinin, desmosome associated protein 0.0310885
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0308027
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0306187
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0305415
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0304881
TFG TRK-fused gene 0.0303153
ZC3H11A zinc finger CCCH-type containing 11A 0.0300646
RTN4 reticulon 4 0.0299569
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0292637
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0290008
MARCHF6 membrane associated ring-CH-type finger 6 0.0289962
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0289159
CDC73 cell division cycle 73 0.0289034

decreased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 -0.22623
FN1 fibronectin 1 -0.137203
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.126352
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.120242
HMGA2 high mobility group AT-hook 2 -0.0842464
INTS6 integrator complex subunit 6 -0.0796846
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0761378
SQSTM1 sequestosome 1 -0.075846
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0694205
TPT1 tumor protein, translationally-controlled 1 -0.0685925
VCL vinculin -0.0648034
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.061167
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0609215
LOC102724023 ES1 protein homolog, mitochondrial -0.0602175
AEBP2 AE binding protein 2 -0.0581443
EGR1 early growth response 1 -0.0474923
IER3 immediate early response 3 -0.0474072
LRRC23 leucine rich repeat containing 23 -0.0447669
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0447447
IFI27 interferon, alpha-inducible protein 27 -0.0438117
PDE4D phosphodiesterase 4D, cAMP-specific -0.0436326
PTMA prothymosin, alpha -0.0432381
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A -0.0427784
TMSB10 thymosin beta 10 -0.0416651
ACTG1 actin gamma 1 -0.0416413
CADM1 cell adhesion molecule 1 -0.0402915
MRPS6 mitochondrial ribosomal protein S6 -0.0394495
HLA-B major histocompatibility complex, class I, B -0.0393149
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0390065
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0380022
RPS24 ribosomal protein S24 -0.0379243
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0373235
AHRR aryl-hydrocarbon receptor repressor -0.0365593
S100A6 S100 calcium binding protein A6 -0.0362733
FTL ferritin, light polypeptide -0.0356739
DUSP6 dual specificity phosphatase 6 -0.034761
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.034339
RAI14 retinoic acid induced 14 -0.0342381
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0338919
MCL1 myeloid cell leukemia 1 -0.033659
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0329137
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0324844
ZBTB20 zinc finger and BTB domain containing 20 -0.0322635
STC2 stanniocalcin 2 -0.0321714
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0320739
SOX4 SRY (sex determining region Y)-box 4 -0.0315574
SPDYA speedy/RINGO cell cycle regulator family member A -0.0309758
PALLD palladin, cytoskeletal associated protein -0.0306849
AKAP12 A kinase (PRKA) anchor protein 12 -0.0305878
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0305428
EFNA5 ephrin-A5 -0.0302533
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0297033
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0288861
LIMCH1 LIM and calponin homology domains 1 -0.0288332
SYT1 synaptotagmin I -0.0288004
RPL31 ribosomal protein L31 -0.02854
LOX lysyl oxidase -0.0280772
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0263283
IGFBP3 insulin-like growth factor binding protein 3 -0.0259664
CCDC138 coiled-coil domain containing 138 -0.0257602
BLZF1 basic leucine zipper nuclear factor 1 -0.0257282
CUX1 cut-like homeobox 1 -0.0255729
SLC35F3 solute carrier family 35, member F3 -0.0252269
CTSD cathepsin D -0.025185
SCFD2 sec1 family domain containing 2 -0.0245872
TAS2R14 taste receptor, type 2, member 14 -0.0242248
UGDH UDP-glucose 6-dehydrogenase -0.0241988
EXT1 exostosin glycosyltransferase 1 -0.0239471
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0237475
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 -0.0236878
TENM4 teneurin transmembrane protein 4 -0.0236437
TFPI2 tissue factor pathway inhibitor 2 -0.0235269
PRKCA protein kinase C, alpha -0.0234893
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0234313
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0233866
FBN1 fibrillin 1 -0.0233663
TMSB4X thymosin beta 4, X-linked -0.0231174
SOX5 SRY (sex determining region Y)-box 5 -0.023076
IFI6 interferon, alpha-inducible protein 6 -0.0230245
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0229523
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0228938
VIM vimentin -0.0228666
MYO1E myosin IE -0.0227885
TUFT1 tuftelin 1 -0.0226483
POU2F2 POU class 2 homeobox 2 -0.0219879
SLC38A2 solute carrier family 38, member 2 -0.0219553
CDK13 cyclin-dependent kinase 13 -0.021893
BICD1 bicaudal D homolog 1 (Drosophila) -0.0218851
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0213843
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0212938
CLIP2 CAP-GLY domain containing linker protein 2 -0.0208792
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0207794
NXN nucleoredoxin -0.0206062
HLA-A major histocompatibility complex, class I, A -0.0204593
UBC ubiquitin C -0.020397
ARF4 ADP-ribosylation factor 4 -0.0202691
EXOC4 exocyst complex component 4 -0.0201149
TM4SF1 transmembrane 4 L six family member 1 -0.020073
CLIC4 chloride intracellular channel 4 -0.0198778
IGFBP5 insulin-like growth factor binding protein 5 -0.0194476