Cyclosporin A_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cyclosporin A perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cyclosporin A_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.217509
KRT8 keratin 8, type II 0.150027
KRT18 keratin 18, type I 0.134647
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.106241
EEF2 eukaryotic translation elongation factor 2 0.0914138
ANXA2 annexin A2 0.0820119
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0817257
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0751774
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0745797
PLEC plectin 0.0723967
EZR ezrin 0.0706845
LOC112694756 uncharaterized LOC112694756 0.0698163
BCL2L1 BCL2-like 1 0.0683697
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0680898
FAT1 FAT atypical cadherin 1 0.0667071
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0663467
PTMA prothymosin, alpha 0.0639158
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0636392
FLNA filamin A, alpha 0.0628292
ACTN4 actinin, alpha 4 0.0624879
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0597398
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0579049
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0556446
EGR1 early growth response 1 0.0545455
MYH9 myosin, heavy chain 9, non-muscle 0.0522891
FTH1 ferritin, heavy polypeptide 1 0.0497327
TMSB4X thymosin beta 4, X-linked 0.0464862
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0442046
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.044107
B2M beta-2-microglobulin 0.043894
MED15 mediator complex subunit 15 0.0435318
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0435297
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0432602
NDRG1 N-myc downstream regulated 1 0.043242
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0429387
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0419859
NCEH1 neutral cholesterol ester hydrolase 1 0.0417534
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0406085
SNX9 sorting nexin 9 0.0405976
BHLHE40 basic helix-loop-helix family, member e40 0.0405723
PKM pyruvate kinase, muscle 0.0394215
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0389993
MACC1 metastasis associated in colon cancer 1 0.0382959
SPTBN1 spectrin, beta, non-erythrocytic 1 0.037938
CALR calreticulin 0.0376978
VEGFA vascular endothelial growth factor A 0.0371548
RAD23B RAD23 homolog B (S. cerevisiae) 0.0363496
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0353621
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0352611
UBE2H ubiquitin-conjugating enzyme E2H 0.0350096
CLIP2 CAP-GLY domain containing linker protein 2 0.0342539
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0335708
CSNK1A1 casein kinase 1, alpha 1 0.0329492
RAB7A RAB7A, member RAS oncogene family 0.0325118
MYOF myoferlin 0.0324977
TINAGL1 tubulointerstitial nephritis antigen-like 1 0.0322096
FNDC3B fibronectin type III domain containing 3B 0.0321955
AMOTL2 angiomotin like 2 0.0315319
ANXA11 annexin A11 0.0315033
H1-0 H1.0 linker histone 0.0305853
JUP junction plakoglobin 0.0301897
SRRM2 serine/arginine repetitive matrix 2 0.0300543
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0299989
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0295687
SET SET nuclear proto-oncogene 0.0295393
NONO non-POU domain containing, octamer-binding 0.0294657
CTNND1 catenin (cadherin-associated protein), delta 1 0.0294034
TNIP1 TNFAIP3 interacting protein 1 0.0293892
PERP PERP, TP53 apoptosis effector 0.0290987
APLP2 amyloid beta (A4) precursor-like protein 2 0.0289852
APP amyloid beta (A4) precursor protein 0.0289224
DSPP dentin sialophosphoprotein 0.0286143
SQSTM1 sequestosome 1 0.0283673
MYO5B myosin VB 0.028338
HSPA8 heat shock 70kDa protein 8 0.0278254
USP9X ubiquitin specific peptidase 9, X-linked 0.0277473
MKI67 marker of proliferation Ki-67 0.0275531
NCOR2 nuclear receptor corepressor 2 0.0275095
FUS FUS RNA binding protein 0.0274806
KMT2C lysine (K)-specific methyltransferase 2C 0.0273678
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0272874
ADAM19 ADAM metallopeptidase domain 19 0.0270723
TRIO trio Rho guanine nucleotide exchange factor 0.0269268
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0267454
LENG8 leukocyte receptor cluster (LRC) member 8 0.026737
ANKRD11 ankyrin repeat domain 11 0.02669
EIF1 eukaryotic translation initiation factor 1 0.0265404
EPS8 epidermal growth factor receptor pathway substrate 8 0.0264502
LOC102724023 ES1 protein homolog, mitochondrial 0.0264406
CTSA cathepsin A 0.0261877
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0261577
CEMIP cell migration inducing protein, hyaluronan binding 0.0259388
SHB Src homology 2 domain containing adaptor protein B 0.0259116
OXSR1 oxidative stress responsive 1 0.025865
ESYT2 extended synaptotagmin-like protein 2 0.0258199
MYH14 myosin, heavy chain 14, non-muscle 0.0257751
PLK2 polo-like kinase 2 0.0257627
POTEF POTE ankyrin domain family, member F 0.0257422
ITGA6 integrin, alpha 6 0.0257347
PUM1 pumilio RNA-binding family member 1 0.0256288

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.03583
RPS6 ribosomal protein S6 -0.0313101
TMSB10 thymosin beta 10 -0.0287796
RPS2 ribosomal protein S2 -0.0250531
RPLP1 ribosomal protein, large, P1 -0.0227696
IER3 immediate early response 3 -0.0182973
PNISR PNN-interacting serine/arginine-rich protein -0.0174597
RPLP2 ribosomal protein, large, P2 -0.0173408
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0173232
HMGB1 high mobility group box 1 -0.0170458
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0163595
TPT1 tumor protein, translationally-controlled 1 -0.0152206
RPL32 ribosomal protein L32 -0.0149263
RPS19 ribosomal protein S19 -0.0148431
RPL28 ribosomal protein L28 -0.0147011
RPL12 ribosomal protein L12 -0.0145325
RPS5 ribosomal protein S5 -0.0140645
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0139823
RPL35A ribosomal protein L35a -0.0139058
PDE4D phosphodiesterase 4D, cAMP-specific -0.0138052
RPL19 ribosomal protein L19 -0.012924
SEPTIN7 septin 7 -0.0124815
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0122438
EIF2A eukaryotic translation initiation factor 2A, 65kDa -0.011714
ZFAND3 zinc finger, AN1-type domain 3 -0.0115574
RPS24 ribosomal protein S24 -0.0114553
DACH1 dachshund family transcription factor 1 -0.0109677
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0109289
DEK DEK proto-oncogene -0.0108388
RIGI RNA sensor RIG-I -0.0106286
ATP5F1E ATP synthase F1 subunit epsilon -0.0105572
VIM vimentin -0.010289
RPS11 ribosomal protein S11 -0.0102418
RPL23A ribosomal protein L23a -0.0101415
RPL7 ribosomal protein L7 -0.0100955
NEMF nuclear export mediator factor -0.00978626
MBD5 methyl-CpG binding domain protein 5 -0.00977565
ZRANB2 zinc finger, RAN-binding domain containing 2 -0.00958421
RPS15 ribosomal protein S15 -0.00957152
ANKRD12 ankyrin repeat domain 12 -0.00952006
USP3 ubiquitin specific peptidase 3 -0.00935153
ZBTB20 zinc finger and BTB domain containing 20 -0.00920711
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.00915269
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.00911603
FAM76B family with sequence similarity 76, member B -0.00911311
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.00910272
NFE2L2 nuclear factor, erythroid 2-like 2 -0.00892887
RPL9 ribosomal protein L9 -0.00889457
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.00887048
RPL36 ribosomal protein L36 -0.00886645
STAU1 staufen double-stranded RNA binding protein 1 -0.00881532
IFIH1 interferon induced with helicase C domain 1 -0.00872848
TSC22D2 TSC22 domain family, member 2 -0.00858438
RNF149 ring finger protein 149 -0.00852002
RPL38 ribosomal protein L38 -0.00845027
CSNK1G3 casein kinase 1, gamma 3 -0.00840819
RPS25 ribosomal protein S25 -0.00833815
FNDC3A fibronectin type III domain containing 3A -0.00825656
ELF2 E74-like factor 2 (ets domain transcription factor) -0.00821648
H1-4 H1.4 linker histone, cluster member -0.00820102
RPL14 ribosomal protein L14 -0.00819102
NHSL1 NHS-like 1 -0.00808879
HSPE1 heat shock 10kDa protein 1 -0.0080563
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 -0.00795982
HBP1 HMG-box transcription factor 1 -0.00790988
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0077792
SOS1 son of sevenless homolog 1 (Drosophila) -0.00774835
RNF13 ring finger protein 13 -0.0076713
RPL31 ribosomal protein L31 -0.00759197
SCLT1 sodium channel and clathrin linker 1 -0.0075458
U2SURP U2 snRNP-associated SURP domain containing -0.00753065
FBXW11 F-box and WD repeat domain containing 11 -0.00749032
SELENOT selenoprotein T -0.00745779
SAMD12 sterile alpha motif domain containing 12 -0.00745588
MX2 MX dynamin-like GTPase 2 -0.00744058
LCORL ligand dependent nuclear receptor corepressor-like -0.00743415
HIBCH 3-hydroxyisobutyryl-CoA hydrolase -0.00741154
ZC3H13 zinc finger CCCH-type containing 13 -0.00740841
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.00720254
MYO9A myosin IXA -0.00717379
NALF1 NALCN channel auxiliary factor 1 -0.00711399
CCDC91 coiled-coil domain containing 91 -0.00710876
RPL4 ribosomal protein L4 -0.00706722
NKTR natural killer cell triggering receptor -0.00706563
ARID4A AT rich interactive domain 4A (RBP1-like) -0.0070289
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.00696913
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.00695118
SSR4 signal sequence receptor, delta -0.00694943
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.00690671
GPSM2 G-protein signaling modulator 2 -0.00687905
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.00687749
BTBD9 BTB (POZ) domain containing 9 -0.0068522
CENPF centromere protein F, 350/400kDa -0.00679473
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.00678713
PNRC1 proline-rich nuclear receptor coactivator 1 -0.00676498
GPHN gephyrin -0.00676042
RPAP2 RNA polymerase II associated protein 2 -0.00675239
RPAP3 RNA polymerase II associated protein 3 -0.00671192
RPL34 ribosomal protein L34 -0.0067044
RPS27A ribosomal protein S27a -0.0066944