Cysteamine (hydrochloride)_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MEST mesoderm specific transcript 0.22985
PDE4D phosphodiesterase 4D, cAMP-specific 0.206074
TSHZ2 teashirt zinc finger homeobox 2 0.0816494
PDE10A phosphodiesterase 10A 0.0695078
FNIP1 folliculin interacting protein 1 0.0618636
THSD4 thrombospondin, type I, domain containing 4 0.0616847
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0556929
GSE1 Gse1 coiled-coil protein 0.049011
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0483124
SMYD3 SET and MYND domain containing 3 0.0483028
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0460058
PCM1 pericentriolar material 1 0.045642
BBX bobby sox homolog (Drosophila) 0.0444799
VEGFA vascular endothelial growth factor A 0.0433704
BTBD3 BTB (POZ) domain containing 3 0.0414289
KIF1B kinesin family member 1B 0.0401133
CUX1 cut-like homeobox 1 0.0395503
ZBTB20 zinc finger and BTB domain containing 20 0.0389339
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0388298
FBXL7 F-box and leucine-rich repeat protein 7 0.038248
BCAS3 breast carcinoma amplified sequence 3 0.0381282
PRELID2 PRELI domain containing 2 0.0364277
SIK3 SIK family kinase 3 0.0360912
EGFR epidermal growth factor receptor 0.0359149
TNS3 tensin 3 0.0358029
HMGA2 high mobility group AT-hook 2 0.0356424
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0355441
PTEN phosphatase and tensin homolog 0.0349585
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0345178
SPIDR scaffolding protein involved in DNA repair 0.033997
RANBP17 RAN binding protein 17 0.0338547
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae) 0.0338293
ACTG1 actin gamma 1 0.0337898
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0333685
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0329962
APLP2 amyloid beta (A4) precursor-like protein 2 0.0326951
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.0319447
CLIP1 CAP-GLY domain containing linker protein 1 0.0317384
ITGAV integrin, alpha V 0.0314362
HDAC8 histone deacetylase 8 0.0306597
WWOX WW domain containing oxidoreductase 0.0306367
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A 0.030407
HELLS helicase, lymphoid-specific 0.0302837
SAMD4A sterile alpha motif domain containing 4A 0.0301216
SCAF11 SR-related CTD-associated factor 11 0.0300207
DSCAM Down syndrome cell adhesion molecule 0.0299146
LINGO2 leucine rich repeat and Ig domain containing 2 0.0296489
ANKRD12 ankyrin repeat domain 12 0.0294532
FER fer (fps/fes related) tyrosine kinase 0.0293277
RPS2 ribosomal protein S2 0.0291209
DLG1 discs, large homolog 1 (Drosophila) 0.0289316
NBEA neurobeachin 0.0285126
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0284204
PTBP2 polypyrimidine tract binding protein 2 0.0282993
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0280578
PBX3 pre-B-cell leukemia homeobox 3 0.0279538
HIPK2 homeodomain interacting protein kinase 2 0.0277673
UST uronyl-2-sulfotransferase 0.0276648
DOCK1 dedicator of cytokinesis 1 0.0269967
RABGAP1L RAB GTPase activating protein 1-like 0.0269226
ADGRA3 adhesion G protein-coupled receptor A3 0.0267515
COL4A5 collagen, type IV, alpha 5 0.0265532
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0264836
TXNRD1 thioredoxin reductase 1 0.0262671
AHCYL2 adenosylhomocysteinase-like 2 0.0261794
RPL37 ribosomal protein L37 0.0261473
PHACTR4 phosphatase and actin regulator 4 0.0259482
GANAB glucosidase, alpha; neutral AB 0.0258649
HSPA8 heat shock 70kDa protein 8 0.0258568
SMC1A structural maintenance of chromosomes 1A 0.025732
DIAPH3 diaphanous-related formin 3 0.0255676
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0251223
MSRB3 methionine sulfoxide reductase B3 0.0249414
DOCK3 dedicator of cytokinesis 3 0.0247799
PRRC2A proline-rich coiled-coil 2A 0.0247531
PDE8A phosphodiesterase 8A 0.0242504
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.024025
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0239661
RPL3 ribosomal protein L3 0.02385
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0237248
FRMD6 FERM domain containing 6 0.0236465
TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 0.0232357
SCGB1D1 secretoglobin, family 1D, member 1 0.0230005
AKAP9 A kinase (PRKA) anchor protein 9 0.0228779
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0228416
UBE3A ubiquitin protein ligase E3A 0.0226056
PPA2 pyrophosphatase (inorganic) 2 0.0225579
SOBP sine oculis binding protein homolog (Drosophila) 0.0218853
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0217644
TTC17 tetratricopeptide repeat domain 17 0.0216386
BRWD3 bromodomain and WD repeat domain containing 3 0.0215139
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0214443
TRIM44 tripartite motif containing 44 0.0213958
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0212321
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0211478
FAF1 Fas (TNFRSF6) associated factor 1 0.0211295
HOXA3 homeobox A3 0.0210263
ATXN2L ataxin 2-like 0.0209485
MTREX Mtr4 exosome RNA helicase 0.0208348
BBS9 Bardet-Biedl syndrome 9 0.0208103

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.118373
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.102453
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0752155
PEG10 paternally expressed 10 -0.0733139
SOX4 SRY (sex determining region Y)-box 4 -0.0729655
FTL ferritin, light polypeptide -0.0638925
TMSB10 thymosin beta 10 -0.0575527
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0563882
PTMA prothymosin, alpha -0.0507257
PHF3 PHD finger protein 3 -0.0489486
MATR3 matrin 3 -0.0484591
CANX calnexin -0.0466051
QKI QKI, KH domain containing, RNA binding -0.0435626
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0431162
NAMPT nicotinamide phosphoribosyltransferase -0.0420156
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0418091
WAC WW domain containing adaptor with coiled-coil -0.0405978
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0396165
MT2A metallothionein 2A -0.039469
USP9X ubiquitin specific peptidase 9, X-linked -0.0392288
ZNF292 zinc finger protein 292 -0.0386203
TFRC transferrin receptor -0.0385638
RAB7A RAB7A, member RAS oncogene family -0.0368909
ANKHD1 ankyrin repeat and KH domain containing 1 -0.036185
HBP1 HMG-box transcription factor 1 -0.035807
ZFAND3 zinc finger, AN1-type domain 3 -0.0356679
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.035446
GNAS GNAS complex locus -0.035285
RPL35A ribosomal protein L35a -0.034655
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0346536
YBX1 Y box binding protein 1 -0.0341787
CDC73 cell division cycle 73 -0.0334367
ZNF207 zinc finger protein 207 -0.0331085
IGF2 insulin-like growth factor 2 -0.0329753
RSRC2 arginine/serine-rich coiled-coil 2 -0.0320714
TSC22D2 TSC22 domain family, member 2 -0.0320328
SPAG9 sperm associated antigen 9 -0.0315037
RPS24 ribosomal protein S24 -0.0314984
TOP2B topoisomerase (DNA) II beta 180kDa -0.0314728
LOC102724023 ES1 protein homolog, mitochondrial -0.0313379
TPT1 tumor protein, translationally-controlled 1 -0.0311939
RPS25 ribosomal protein S25 -0.0311739
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0311333
MTDH metadherin -0.0305035
PGK1 phosphoglycerate kinase 1 -0.030489
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0303886
RPLP1 ribosomal protein, large, P1 -0.0301886
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0299218
KDM3A lysine (K)-specific demethylase 3A -0.0298635
CADM2 cell adhesion molecule 2 -0.0297564
NDRG1 N-myc downstream regulated 1 -0.029671
IFRD1 interferon-related developmental regulator 1 -0.0295441
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0295264
RSL1D1 ribosomal L1 domain containing 1 -0.0294075
FCHSD2 FCH and double SH3 domains 2 -0.0292329
KAT6A K(lysine) acetyltransferase 6A -0.0291326
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0290399
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.029032
RPL5 ribosomal protein L5 -0.0289034
RPL19 ribosomal protein L19 -0.0288209
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0283556
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 -0.0281319
NAP1L1 nucleosome assembly protein 1-like 1 -0.0278918
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0276258
GOLGA4 golgin A4 -0.0273472
KPNA3 karyopherin alpha 3 (importin alpha 4) -0.0271863
IARS1 isoleucyl-tRNA synthetase 1 -0.0270981
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0270472
CAMK2D calcium/calmodulin-dependent protein kinase II delta -0.0269364
NOP58 NOP58 ribonucleoprotein -0.026907
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0267564
MAP4 microtubule-associated protein 4 -0.0265781
GPBP1 GC-rich promoter binding protein 1 -0.026398
SMC3 structural maintenance of chromosomes 3 -0.0263599
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0262639
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.026198
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0260607
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0260587
TPK1 thiamin pyrophosphokinase 1 -0.0260134
ANKRD11 ankyrin repeat domain 11 -0.0259871
SSBP2 single-stranded DNA binding protein 2 -0.025819
RHEB Ras homolog enriched in brain -0.0258085
RPL8 ribosomal protein L8 -0.0257217
RFX7 regulatory factor X, 7 -0.0254377
CERT1 ceramide transporter 1 -0.025319
CBFB core-binding factor, beta subunit -0.0252691
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0252035
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0250672
NASP nuclear autoantigenic sperm protein (histone-binding) -0.02484
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0245493
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0245334
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0244441
HSPB1 heat shock 27kDa protein 1 -0.0244141
IER3 immediate early response 3 -0.0241208
USP24 ubiquitin specific peptidase 24 -0.0240636
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0240376
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0239409
TULP4 tubby like protein 4 -0.0239296
KDM5B lysine (K)-specific demethylase 5B -0.0238881
USP3 ubiquitin specific peptidase 3 -0.023852