Cysteamine (hydrochloride)_CFPAC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in CFPAC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.197475
FTH1 ferritin, heavy polypeptide 1 0.155328
TGM2 transglutaminase 2 0.134061
IGFBP3 insulin-like growth factor binding protein 3 0.113275
APOL1 apolipoprotein L, 1 0.111151
MT2A metallothionein 2A 0.105701
KRT19 keratin 19, type I 0.102477
FNDC3B fibronectin type III domain containing 3B 0.094598
APLP2 amyloid beta (A4) precursor-like protein 2 0.0881279
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0794458
IFI27 interferon, alpha-inducible protein 27 0.073735
SMAD3 SMAD family member 3 0.0677982
HLA-A major histocompatibility complex, class I, A 0.0665858
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0616921
B2M beta-2-microglobulin 0.0614997
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0576709
LAMA4 laminin, alpha 4 0.0567833
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.056244
LCN2 lipocalin 2 0.0528218
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0496655
P4HB prolyl 4-hydroxylase, beta polypeptide 0.04845
EFNA5 ephrin-A5 0.0478991
NDRG1 N-myc downstream regulated 1 0.0476478
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0456033
LOC112694756 uncharaterized LOC112694756 0.0445225
SGMS2 sphingomyelin synthase 2 0.0443775
VEGFA vascular endothelial growth factor A 0.0440264
MYO1E myosin IE 0.0422429
PPARD peroxisome proliferator-activated receptor delta 0.0420192
RAD51B RAD51 paralog B 0.0413785
RNF213 ring finger protein 213 0.0403158
H1-0 H1.0 linker histone 0.0392839
CSTB cystatin B (stefin B) 0.0387381
SEPTIN9 septin 9 0.038662
MCL1 myeloid cell leukemia 1 0.0383324
LOC102724023 ES1 protein homolog, mitochondrial 0.0374315
C3 complement component 3 0.0373593
EPAS1 endothelial PAS domain protein 1 0.0372281
EGR1 early growth response 1 0.0369538
RPS6 ribosomal protein S6 0.0366298
HLA-B major histocompatibility complex, class I, B 0.0365572
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0357978
JUP junction plakoglobin 0.0343128
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0343029
DOCK5 dedicator of cytokinesis 5 0.0342324
NCOR2 nuclear receptor corepressor 2 0.0341295
GRB10 growth factor receptor-bound protein 10 0.0332005
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0330857
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0329092
MUC1 mucin 1, cell surface associated 0.0316043
ISG15 ISG15 ubiquitin-like modifier 0.0314364
TMEM51 transmembrane protein 51 0.0311926
PLEC plectin 0.0307818
TMC5 transmembrane channel-like 5 0.0301743
TINAGL1 tubulointerstitial nephritis antigen-like 1 0.0300819
DUSP5 dual specificity phosphatase 5 0.0300789
CMIP c-Maf inducing protein 0.0300435
FTL ferritin, light polypeptide 0.0294584
AGRN agrin 0.0294517
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.0294034
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy 0.0291986
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0289059
ARHGAP26 Rho GTPase activating protein 26 0.028867
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0286432
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0286394
FHL2 four and a half LIM domains 2 0.0283907
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.027534
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0274975
CP ceruloplasmin (ferroxidase) 0.0270734
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0269531
ECE1 endothelin converting enzyme 1 0.026892
HSPG2 heparan sulfate proteoglycan 2 0.0266053
BCL2L1 BCL2-like 1 0.0263085
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0262961
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0260596
ZMIZ1 zinc finger, MIZ-type containing 1 0.0258167
MT1E metallothionein 1E 0.0257603
CIB1 calcium and integrin binding 1 (calmyrin) 0.0255151
FOSL1 FOS-like antigen 1 0.025346
ADAM28 ADAM metallopeptidase domain 28 0.0252128
MX2 MX dynamin-like GTPase 2 0.0251619
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0251275
MX1 MX dynamin-like GTPase 1 0.0250716
NOTCH2 notch 2 0.0245875
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0241852
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0240497
SHB Src homology 2 domain containing adaptor protein B 0.0239787
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0237154
ZSWIM6 zinc finger, SWIM-type containing 6 0.0233106
STC1 stanniocalcin 1 0.0232768
CD44 CD44 molecule (Indian blood group) 0.022733
NPAS2 neuronal PAS domain protein 2 0.0227195
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0226842
DEPP1 DEPP autophagy regulator 1 0.0223219
TXNIP thioredoxin interacting protein 0.0221562
SACK1A scaffolding CK1 anchoring protein A 0.0221506
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0219956
HILPDA hypoxia inducible lipid droplet-associated 0.0216578
RPS2 ribosomal protein S2 0.021588
BRD2 bromodomain containing 2 0.0213865

decreased expression

Symbol Name Standardized Value
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.091627
TMSB4X thymosin beta 4, X-linked -0.0885697
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0841567
TMSB10 thymosin beta 10 -0.0812086
UBC ubiquitin C -0.0787534
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0739215
PTMA prothymosin, alpha -0.0718548
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0678331
MMP7 matrix metallopeptidase 7 -0.0649352
F3 coagulation factor III (thromboplastin, tissue factor) -0.0554157
KDM3A lysine (K)-specific demethylase 3A -0.0490453
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0422555
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0422442
PGK1 phosphoglycerate kinase 1 -0.0409404
PICALM phosphatidylinositol binding clathrin assembly protein -0.0407135
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0405496
LMO7 LIM domain 7 -0.0405183
ITPRID2 ITPR interacting domain containing 2 -0.0401809
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0398213
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0388867
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0385968
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0374879
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0369313
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0368089
ACTG1 actin gamma 1 -0.0357098
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.035424
ASPH aspartate beta-hydroxylase -0.0352974
TMEM123 transmembrane protein 123 -0.0348742
RBM39 RNA binding motif protein 39 -0.0347149
TRIO trio Rho guanine nucleotide exchange factor -0.034586
FLNB filamin B, beta -0.0331342
AHNAK AHNAK nucleoprotein -0.0329867
RPS27A ribosomal protein S27a -0.0329314
FRMD5 FERM domain containing 5 -0.0322517
CLIP4 CAP-GLY domain containing linker protein family, member 4 -0.031952
RASAL2 RAS protein activator like 2 -0.0317434
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0314165
CANX calnexin -0.0306654
PLAU plasminogen activator, urokinase -0.0294604
NAMPT nicotinamide phosphoribosyltransferase -0.0289343
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.028456
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0284131
OGA O-GlcNAcase -0.0280822
JMJD1C jumonji domain containing 1C -0.0280157
ADAM9 ADAM metallopeptidase domain 9 -0.0279448
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0278489
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0271986
PDLIM5 PDZ and LIM domain 5 -0.026897
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0263148
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0262968
COG5 component of oligomeric golgi complex 5 -0.0261346
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0258517
SPAG9 sperm associated antigen 9 -0.0257461
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0256578
NIPBL Nipped-B homolog (Drosophila) -0.025503
ERBIN erbb2 interacting protein -0.0254583
RPS24 ribosomal protein S24 -0.0252964
MARCHF6 membrane associated ring-CH-type finger 6 -0.0242771
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0242351
ALCAM activated leukocyte cell adhesion molecule -0.0241087
KLF6 Kruppel-like factor 6 -0.0236384
NT5C2 5'-nucleotidase, cytosolic II -0.0234378
DTNA dystrobrevin, alpha -0.023263
EPCAM epithelial cell adhesion molecule -0.0232197
TPM1 tropomyosin 1 (alpha) -0.0231727
IRF6 interferon regulatory factor 6 -0.0229403
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa -0.0229277
LAMC2 laminin, gamma 2 -0.0228766
NPEPPS aminopeptidase puromycin sensitive -0.0228096
PDIA4 protein disulfide isomerase family A, member 4 -0.0225452
IER3 immediate early response 3 -0.0224376
EREG epiregulin -0.0223334
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0222885
FMNL2 formin-like 2 -0.0222178
WIPF2 WAS/WASL interacting protein family, member 2 -0.0221103
TM9SF3 transmembrane 9 superfamily member 3 -0.0220535
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0220399
GSK3B glycogen synthase kinase 3 beta -0.0218303
RTN4 reticulon 4 -0.0218112
CDK6 cyclin-dependent kinase 6 -0.0216654
ARHGAP29 Rho GTPase activating protein 29 -0.0216435
NCKAP5 NCK-associated protein 5 -0.0215802
RRBP1 ribosome binding protein 1 -0.0214228
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0213726
ZFAND3 zinc finger, AN1-type domain 3 -0.0213219
MYO6 myosin VI -0.0212482
SPDYA speedy/RINGO cell cycle regulator family member A -0.0211731
MACC1 metastasis associated in colon cancer 1 -0.0211503
KMT2C lysine (K)-specific methyltransferase 2C -0.0211258
INSIG1 insulin induced gene 1 -0.0207046
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0205458
MCTP1 multiple C2 domains, transmembrane 1 -0.0205432
STRN3 striatin, calmodulin binding protein 3 -0.0204908
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0204738
USP15 ubiquitin specific peptidase 15 -0.0204244
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0202428
USP53 ubiquitin specific peptidase 53 -0.0201338
CLTC clathrin, heavy chain (Hc) -0.0199984
CALR calreticulin -0.019992
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 -0.0199908