Cysteamine (hydrochloride)_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD44 CD44 molecule (Indian blood group) 0.164009
MT2A metallothionein 2A 0.140391
TRIO trio Rho guanine nucleotide exchange factor 0.13315
SMAD3 SMAD family member 3 0.117052
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0901257
FAM13A family with sequence similarity 13, member A 0.0853371
CDCP1 CUB domain containing protein 1 0.0837347
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0824313
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0765832
RUNX1 runt-related transcription factor 1 0.0761325
ANKRD28 ankyrin repeat domain 28 0.0753258
AXL AXL receptor tyrosine kinase 0.0691656
MYO10 myosin X 0.0690438
HMGA2 high mobility group AT-hook 2 0.0686098
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0664275
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0653869
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0636733
SYAP1 synapse associated protein 1 0.0625995
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0619907
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0602203
SHB Src homology 2 domain containing adaptor protein B 0.0600361
PTK2 protein tyrosine kinase 2 0.0591011
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0583165
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0579945
RAI14 retinoic acid induced 14 0.0576834
VEGFC vascular endothelial growth factor C 0.0549952
AKAP12 A kinase (PRKA) anchor protein 12 0.0544014
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0542282
COL6A2 collagen, type VI, alpha 2 0.0506205
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0501407
FLNB filamin B, beta 0.0494284
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0489904
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0484349
DNMBP dynamin binding protein 0.0483085
SEPTIN9 septin 9 0.0482466
RPS6 ribosomal protein S6 0.0477652
TM4SF1 transmembrane 4 L six family member 1 0.04653
RNF24 ring finger protein 24 0.0454872
SYNJ2 synaptojanin 2 0.0443495
ACTG1 actin gamma 1 0.0441672
MPRIP myosin phosphatase Rho interacting protein 0.0431673
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0429177
NCOR2 nuclear receptor corepressor 2 0.0419034
PTPRM protein tyrosine phosphatase, receptor type, M 0.0416402
KDM2A lysine (K)-specific demethylase 2A 0.0416027
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0413918
ZNF638 zinc finger protein 638 0.0411185
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0410591
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0408079
TENM2 teneurin transmembrane protein 2 0.0405835
RPS8 ribosomal protein S8 0.0403664
NF1 neurofibromin 1 0.0400766
NAV1 neuron navigator 1 0.0393876
BICD1 bicaudal D homolog 1 (Drosophila) 0.0392712
MT1E metallothionein 1E 0.0386838
ZBTB38 zinc finger and BTB domain containing 38 0.038672
CALU calumenin 0.0379027
AKAP13 A kinase (PRKA) anchor protein 13 0.0376957
GRAMD1B GRAM domain containing 1B 0.0375961
IL1B interleukin 1, beta 0.0375577
MYO9B myosin IXB 0.0374812
CCND1 cyclin D1 0.0373239
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0366753
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0365525
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0362339
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0353686
MLPH melanophilin 0.0351123
BPTF bromodomain PHD finger transcription factor 0.0347896
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0346983
YEATS2 YEATS domain containing 2 0.034065
LOXL2 lysyl oxidase-like 2 0.0338381
RICTOR RPTOR independent companion of MTOR, complex 2 0.0336865
KIF5B kinesin family member 5B 0.0335156
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0331108
TGM2 transglutaminase 2 0.0331108
ATP13A3 ATPase type 13A3 0.0329517
ETV6 ets variant 6 0.0329093
DOCK5 dedicator of cytokinesis 5 0.0327693
DDIT4 DNA-damage-inducible transcript 4 0.0321907
STC1 stanniocalcin 1 0.0321748
PTPRG protein tyrosine phosphatase, receptor type, G 0.0320447
CEP192 centrosomal protein 192kDa 0.032025
RBM25 RNA binding motif protein 25 0.0313608
YBX3 Y box binding protein 3 0.0313411
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0308511
HIPK2 homeodomain interacting protein kinase 2 0.0308021
EEF1G eukaryotic translation elongation factor 1 gamma 0.030779
G0S2 G0/G1 switch 2 0.0305126
NAV2 neuron navigator 2 0.0305093
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.030504
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0305015
RPL37 ribosomal protein L37 0.0304063
RPL11 ribosomal protein L11 0.0303402
DLG1 discs, large homolog 1 (Drosophila) 0.0302646
BASP1 brain abundant, membrane attached signal protein 1 0.0301568
ITGB5 integrin, beta 5 0.0300524
RPL12 ribosomal protein L12 0.030009
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0299972
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0299637
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0299222

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.21529
CDH13 cadherin 13 -0.206182
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.188036
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.162892
FN1 fibronectin 1 -0.153783
ERRFI1 ERBB receptor feedback inhibitor 1 -0.131656
VCL vinculin -0.110544
TMSB10 thymosin beta 10 -0.100293
ASPH aspartate beta-hydroxylase -0.0997104
MAML3 mastermind-like 3 (Drosophila) -0.082115
PRELID2 PRELI domain containing 2 -0.0771773
CANX calnexin -0.0758738
IGF2 insulin-like growth factor 2 -0.0641518
AHNAK AHNAK nucleoprotein -0.0563862
COL5A1 collagen, type V, alpha 1 -0.055779
VIM vimentin -0.0468519
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.046224
INTS6 integrator complex subunit 6 -0.0440529
FMN1 formin 1 -0.0413374
NABP1 nucleic acid binding protein 1 -0.0401684
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.039048
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.038392
CXCL8 chemokine (C-X-C motif) ligand 8 -0.038116
SHISA5 shisa family member 5 -0.0376357
IGFBP3 insulin-like growth factor binding protein 3 -0.0367503
DIAPH2 diaphanous-related formin 2 -0.0366794
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 -0.0366694
AFF3 AF4/FMR2 family, member 3 -0.036513
PTMA prothymosin, alpha -0.0355868
SDK1 sidekick cell adhesion molecule 1 -0.0355852
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0355757
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0350829
PGK1 phosphoglycerate kinase 1 -0.034105
SOX5 SRY (sex determining region Y)-box 5 -0.0338812
TNNC1 troponin C type 1 (slow) -0.0328281
CFAP20DC CFAP20 domain containing -0.032463
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0317445
APOLD1 apolipoprotein L domain containing 1 -0.0317132
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0310041
TAS2R14 taste receptor, type 2, member 14 -0.030996
PHF3 PHD finger protein 3 -0.0300688
PDIA3 protein disulfide isomerase family A, member 3 -0.0289569
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0284168
MORF4L2 mortality factor 4 like 2 -0.0282313
AEBP2 AE binding protein 2 -0.0279993
PDIA5 protein disulfide isomerase family A, member 5 -0.0276336
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.027463
PDIA4 protein disulfide isomerase family A, member 4 -0.0272912
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0266566
HM13 histocompatibility (minor) 13 -0.0264201
IER3 immediate early response 3 -0.0262985
ADAM32 ADAM metallopeptidase domain 32 -0.0258275
IGF1R insulin-like growth factor 1 receptor -0.0258055
GNAS GNAS complex locus -0.0257369
CALR calreticulin -0.0252628
LDHA lactate dehydrogenase A -0.0251011
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0250977
PKM pyruvate kinase, muscle -0.0246143
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0244865
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0243822
EGR1 early growth response 1 -0.02404
SPDYA speedy/RINGO cell cycle regulator family member A -0.0240328
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0239313
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0237373
RRBP1 ribosome binding protein 1 -0.023349
IPO9 importin 9 -0.0231984
CLIC4 chloride intracellular channel 4 -0.0230067
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.0227631
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0226417
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0225068
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0224135
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0223288
SH2B3 SH2B adaptor protein 3 -0.0219789
TTC23L tetratricopeptide repeat domain 23-like -0.0219715
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0216628
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0216487
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0215013
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0212885
DTNA dystrobrevin, alpha -0.0211374
COL7A1 collagen, type VII, alpha 1 -0.0210675
HDLBP high density lipoprotein binding protein -0.0210614
DGKI diacylglycerol kinase, iota -0.0205792
PRH1 proline-rich protein HaeIII subfamily 1 -0.0204073
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.020356
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0203471
STXBP1 syntaxin binding protein 1 -0.0198268
TMEM263 transmembrane protein 263 -0.0197267
ZBTB20 zinc finger and BTB domain containing 20 -0.0195711
IARS1 isoleucyl-tRNA synthetase 1 -0.019439
PCNX4 pecanex 4 -0.019337
PLS3 plastin 3 -0.0187389
SAR1A secretion associated, Ras related GTPase 1A -0.0184942
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0184739
NALF1 NALCN channel auxiliary factor 1 -0.0183162
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0183143
F3 coagulation factor III (thromboplastin, tissue factor) -0.0182996
SNX14 sorting nexin 14 -0.0180131
S100A10 S100 calcium binding protein A10 -0.0179114
RPS24 ribosomal protein S24 -0.0176929
PLEC plectin -0.0175337