Cysteamine (hydrochloride)_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.250632
CDH13 cadherin 13 0.198493
COL1A1 collagen, type I, alpha 1 0.0979545
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0974063
EXT1 exostosin glycosyltransferase 1 0.0922081
TGFBI transforming growth factor, beta-induced, 68kDa 0.0869477
TRIO trio Rho guanine nucleotide exchange factor 0.0785355
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0780831
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.0717726
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0650362
COL5A1 collagen, type V, alpha 1 0.0636627
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0616828
ANKRD11 ankyrin repeat domain 11 0.0603291
COL6A2 collagen, type VI, alpha 2 0.0580915
ACTG1 actin gamma 1 0.057262
NDRG1 N-myc downstream regulated 1 0.0566922
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0557622
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0554199
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0548242
FBN1 fibrillin 1 0.0519416
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0507392
LPP LIM domain containing preferred translocation partner in lipoma 0.0507186
FTH1 ferritin, heavy polypeptide 1 0.0491409
PDLIM5 PDZ and LIM domain 5 0.0482218
CALU calumenin 0.0476457
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0475937
NAV2 neuron navigator 2 0.0463425
PSD3 pleckstrin and Sec7 domain containing 3 0.046298
COL7A1 collagen, type VII, alpha 1 0.0458559
JARID2 jumonji, AT rich interactive domain 2 0.0453195
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0453065
CADM1 cell adhesion molecule 1 0.0426128
NAV1 neuron navigator 1 0.0425823
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0418757
NALF1 NALCN channel auxiliary factor 1 0.0408289
PDE10A phosphodiesterase 10A 0.0400667
CXCL8 chemokine (C-X-C motif) ligand 8 0.039221
APP amyloid beta (A4) precursor protein 0.0391946
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0389778
PTK2 protein tyrosine kinase 2 0.0389575
GRB10 growth factor receptor-bound protein 10 0.0378783
FMNL2 formin-like 2 0.0376709
PTPRG protein tyrosine phosphatase, receptor type, G 0.03728
EEF2 eukaryotic translation elongation factor 2 0.0365014
TPM4 tropomyosin 4 0.0349277
DOCK5 dedicator of cytokinesis 5 0.0345058
PLEC plectin 0.0343506
TPT1 tumor protein, translationally-controlled 1 0.0339833
LOX lysyl oxidase 0.0337646
TTC3 tetratricopeptide repeat domain 3 0.0337566
KMT2C lysine (K)-specific methyltransferase 2C 0.0335747
HIPK2 homeodomain interacting protein kinase 2 0.0329669
RUNX1 runt-related transcription factor 1 0.0320125
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0311589
RAB7A RAB7A, member RAS oncogene family 0.0311234
VCL vinculin 0.0310935
SEC31A SEC31 homolog A (S. cerevisiae) 0.0309482
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0304235
RPL28 ribosomal protein L28 0.0298892
ATXN1 ataxin 1 0.0292221
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0289728
CDK13 cyclin-dependent kinase 13 0.0288901
CCNY cyclin Y 0.0288178
FNIP1 folliculin interacting protein 1 0.0286669
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0286547
SMYD3 SET and MYND domain containing 3 0.0286436
ZFAND3 zinc finger, AN1-type domain 3 0.0285689
LIMS1 LIM and senescent cell antigen-like domains 1 0.0285515
IQGAP1 IQ motif containing GTPase activating protein 1 0.0284586
ZSWIM6 zinc finger, SWIM-type containing 6 0.0284342
CALD1 caldesmon 1 0.0282726
FGFR1 fibroblast growth factor receptor 1 0.0282574
CMIP c-Maf inducing protein 0.0281196
GANAB glucosidase, alpha; neutral AB 0.0280604
HP1BP3 heterochromatin protein 1, binding protein 3 0.0278068
GARS1 glycyl-tRNA synthetase 1 0.0276252
MRPS6 mitochondrial ribosomal protein S6 0.0275427
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0272356
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0272144
ENO1 enolase 1, (alpha) 0.0272073
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.0270708
PRELID2 PRELI domain containing 2 0.0269268
EGFR epidermal growth factor receptor 0.0267216
SIK3 SIK family kinase 3 0.0264056
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0261091
IARS1 isoleucyl-tRNA synthetase 1 0.0260302
ZCCHC7 zinc finger, CCHC domain containing 7 0.0260283
GLIS3 GLIS family zinc finger 3 0.0258336
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0256764
TRPS1 trichorhinophalangeal syndrome I 0.0254339
PARD3 par-3 family cell polarity regulator 0.0252088
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0251704
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.024977
CUX1 cut-like homeobox 1 0.0249387
RPS6 ribosomal protein S6 0.0248361
JUN jun proto-oncogene 0.0246519
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 0.0243499
GSK3B glycogen synthase kinase 3 beta 0.0241363
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0240545
HILPDA hypoxia inducible lipid droplet-associated 0.0239044

decreased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.077437
CD44 CD44 molecule (Indian blood group) -0.0746201
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0737473
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0630399
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0585013
MT2A metallothionein 2A -0.0581173
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.056086
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0474267
IL6ST interleukin 6 signal transducer -0.0462149
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0433634
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0413401
ARRDC3 arrestin domain containing 3 -0.038683
TNIP1 TNFAIP3 interacting protein 1 -0.0365987
POSTN periostin, osteoblast specific factor -0.0353642
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0341318
PTMA prothymosin, alpha -0.0335796
TMSB10 thymosin beta 10 -0.031715
B2M beta-2-microglobulin -0.0313451
PKM pyruvate kinase, muscle -0.031299
STC1 stanniocalcin 1 -0.03001
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0291321
LDHA lactate dehydrogenase A -0.0289614
ERRFI1 ERBB receptor feedback inhibitor 1 -0.028331
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0282009
WWTR1 WW domain containing transcription regulator 1 -0.0277502
VCAN versican -0.0272214
SAMD9 sterile alpha motif domain containing 9 -0.0267971
DPYSL3 dihydropyrimidinase-like 3 -0.0253715
ALCAM activated leukocyte cell adhesion molecule -0.0247728
ANTXR2 anthrax toxin receptor 2 -0.0246355
FTL ferritin, light polypeptide -0.0240269
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0227947
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0226267
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0223897
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0213817
HAS2 hyaluronan synthase 2 -0.0212765
SMAD3 SMAD family member 3 -0.0211019
MX2 MX dynamin-like GTPase 2 -0.0208195
NAMPT nicotinamide phosphoribosyltransferase -0.0193379
RPL7 ribosomal protein L7 -0.0190413
VEGFA vascular endothelial growth factor A -0.0187989
IFI6 interferon, alpha-inducible protein 6 -0.0186542
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0185564
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0184769
CSF1 colony stimulating factor 1 (macrophage) -0.0184473
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0184118
F3 coagulation factor III (thromboplastin, tissue factor) -0.0178598
IGFBP7 insulin-like growth factor binding protein 7 -0.0178148
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0175287
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0172353
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0171895
RPS2 ribosomal protein S2 -0.0167224
IFNGR1 interferon gamma receptor 1 -0.0161286
IGFBP3 insulin-like growth factor binding protein 3 -0.0161163
FBXO32 F-box protein 32 -0.0158658
KMT2E lysine (K)-specific methyltransferase 2E -0.0157463
TMSB4X thymosin beta 4, X-linked -0.0156974
H1-4 H1.4 linker histone, cluster member -0.0152913
SERINC3 serine incorporator 3 -0.0151131
RPL32 ribosomal protein L32 -0.0150272
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0149939
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0149016
CENPF centromere protein F, 350/400kDa -0.0146738
MT1X metallothionein 1X -0.0143038
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0142778
SQLE squalene epoxidase -0.0141935
UBC ubiquitin C -0.0141792
INHBA inhibin, beta A -0.0141494
SRGN serglycin -0.0140825
TMEM123 transmembrane protein 123 -0.0140272
ICAM1 intercellular adhesion molecule 1 -0.0139792
FCHSD2 FCH and double SH3 domains 2 -0.0138214
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0136833
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0136245
ERAP2 endoplasmic reticulum aminopeptidase 2 -0.0135986
ELL2 elongation factor, RNA polymerase II, 2 -0.0131837
WTAP Wilms tumor 1 associated protein -0.0131368
RIPK2 receptor-interacting serine-threonine kinase 2 -0.0128524
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0128371
LMAN1 lectin, mannose-binding, 1 -0.0127812
CUL4B cullin 4B -0.0127102
TUBA1B tubulin, alpha 1b -0.0125464
XPO1 exportin 1 -0.0125284
CALR calreticulin -0.0124807
AHR aryl hydrocarbon receptor -0.0124338
MTSS1 metastasis suppressor 1 -0.0124095
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0122754
RPL14 ribosomal protein L14 -0.0120715
IFIH1 interferon induced with helicase C domain 1 -0.011807
CAPRIN1 cell cycle associated protein 1 -0.0117822
PDCD5 programmed cell death 5 -0.0117649
SOCS5 suppressor of cytokine signaling 5 -0.0113913
TM4SF1 transmembrane 4 L six family member 1 -0.0113849
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 -0.0112415
THBS1 thrombospondin 1 -0.011121
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0111206
GATA6 GATA binding protein 6 -0.0110209
SEC14L2 SEC14-like 2 (S. cerevisiae) -0.0110208
INSIG2 insulin induced gene 2 -0.0109399
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0109117