Cysteamine (hydrochloride)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.247164
C3 complement component 3 0.139317
SAMD4A sterile alpha motif domain containing 4A 0.123514
AKAP12 A kinase (PRKA) anchor protein 12 0.121494
IGFBP1 insulin-like growth factor binding protein 1 0.116787
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.114333
SVIL supervillin 0.0916721
ATXN1 ataxin 1 0.0826549
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0715213
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0652021
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.065124
TNS1 tensin 1 0.0582851
APLP2 amyloid beta (A4) precursor-like protein 2 0.0565977
GPC6 glypican 6 0.0552994
MYH9 myosin, heavy chain 9, non-muscle 0.0502501
MT2A metallothionein 2A 0.0494989
TRIO trio Rho guanine nucleotide exchange factor 0.049017
PDLIM5 PDZ and LIM domain 5 0.0476563
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0459998
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0450282
KYNU kynureninase 0.0449091
NDRG1 N-myc downstream regulated 1 0.0425092
LPP LIM domain containing preferred translocation partner in lipoma 0.0411515
GRB10 growth factor receptor-bound protein 10 0.0403297
SMAD3 SMAD family member 3 0.0402212
IGF2 insulin-like growth factor 2 0.0401964
TIMP1 TIMP metallopeptidase inhibitor 1 0.0400774
RAD51B RAD51 paralog B 0.0399956
DTNA dystrobrevin, alpha 0.0398354
POTEF POTE ankyrin domain family, member F 0.0394418
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0367607
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0367526
FRMD5 FERM domain containing 5 0.0360919
VEGFA vascular endothelial growth factor A 0.035092
DST dystonin 0.0342091
RPL3 ribosomal protein L3 0.0332009
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0327475
KIAA1217 KIAA1217 0.0327068
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0325203
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0312099
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0308366
FMNL2 formin-like 2 0.0306939
FLNB filamin B, beta 0.0306909
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0302672
MACF1 microtubule-actin crosslinking factor 1 0.0301843
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0295889
FAM13A family with sequence similarity 13, member A 0.0295624
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0294747
KIF1B kinesin family member 1B 0.0289777
MCL1 myeloid cell leukemia 1 0.0289266
DIAPH1 diaphanous-related formin 1 0.028584
RUNX1 runt-related transcription factor 1 0.0282352
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0275411
GSE1 Gse1 coiled-coil protein 0.0269583
STC2 stanniocalcin 2 0.0267814
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0266421
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0266283
FLNA filamin A, alpha 0.0262824
MSI2 musashi RNA-binding protein 2 0.0261344
AFF1 AF4/FMR2 family, member 1 0.0258345
SEPTIN9 septin 9 0.0256845
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0254769
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0253459
EEF2 eukaryotic translation elongation factor 2 0.0251726
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0250076
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0248925
PPARD peroxisome proliferator-activated receptor delta 0.0247028
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0245069
HSPG2 heparan sulfate proteoglycan 2 0.0244322
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0241597
VMP1 vacuole membrane protein 1 0.0240305
DOCK5 dedicator of cytokinesis 5 0.0239719
SRRM2 serine/arginine repetitive matrix 2 0.023881
PRELID2 PRELI domain containing 2 0.0236043
FAM107B family with sequence similarity 107, member B 0.023288
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0231126
TBC1D22A TBC1 domain family, member 22A 0.0230502
AKAP13 A kinase (PRKA) anchor protein 13 0.0229826
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0228868
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0227966
TTC28 tetratricopeptide repeat domain 28 0.0225724
FAM219A family with sequence similarity 219, member A 0.0224606
RASA2 RAS p21 protein activator 2 0.0222548
EIF4B eukaryotic translation initiation factor 4B 0.0221928
RNASEH2A ribonuclease H2, subunit A 0.0221734
RPL27 ribosomal protein L27 0.022154
CCDC88A coiled-coil domain containing 88A 0.0218234
DSCAM Down syndrome cell adhesion molecule 0.0217938
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.021767
SHB Src homology 2 domain containing adaptor protein B 0.0217374
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.021674
USP47 ubiquitin specific peptidase 47 0.0216099
BRD2 bromodomain containing 2 0.0214863
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0214786
DENND1A DENN/MADD domain containing 1A 0.0211556
ITCH itchy E3 ubiquitin protein ligase 0.0209483
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0208807
HPCAL1 hippocalcin-like 1 0.020873
DOCK4 dedicator of cytokinesis 4 0.0208646
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0206127

decreased expression

Symbol Name Standardized Value
APOB apolipoprotein B -0.230327
GPC3 glypican 3 -0.160071
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.105813
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.105804
TM4SF1 transmembrane 4 L six family member 1 -0.0996857
TPT1 tumor protein, translationally-controlled 1 -0.0941224
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0887725
TRIM26 tripartite motif containing 26 -0.0876674
CP ceruloplasmin (ferroxidase) -0.0792507
APOA2 apolipoprotein A-II -0.0756224
RPS24 ribosomal protein S24 -0.0719407
FBF1 Fas (TNFRSF6) binding factor 1 -0.0714579
A2M alpha-2-macroglobulin -0.070516
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0654953
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0628911
EML4 echinoderm microtubule associated protein like 4 -0.0628207
NKD1 naked cuticle homolog 1 (Drosophila) -0.0611719
ELL2 elongation factor, RNA polymerase II, 2 -0.0582905
RBM39 RNA binding motif protein 39 -0.0579654
TMEM123 transmembrane protein 123 -0.0564828
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0556639
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0528971
STAU1 staufen double-stranded RNA binding protein 1 -0.0505352
FN1 fibronectin 1 -0.0488014
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0484669
RPL35A ribosomal protein L35a -0.0480463
DLC1 DLC1 Rho GTPase activating protein -0.0477956
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0474254
RPL34 ribosomal protein L34 -0.0471321
NPR2 natriuretic peptide receptor 2 -0.0441731
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0427728
KDM3A lysine (K)-specific demethylase 3A -0.0419739
PTMA prothymosin, alpha -0.0416169
SLC38A2 solute carrier family 38, member 2 -0.0415565
TMSB10 thymosin beta 10 -0.0413706
EHBP1 EH domain binding protein 1 -0.0412057
RRBP1 ribosome binding protein 1 -0.0401272
APOE apolipoprotein E -0.0398823
PTCHD4 patched domain containing 4 -0.0394336
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2 -0.0378351
VCL vinculin -0.0378026
NCOA7 nuclear receptor coactivator 7 -0.037137
PEG3 paternally expressed 3 -0.0365822
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0362551
LYZ lysozyme -0.0356295
RPLP0 ribosomal protein, large, P0 -0.0355993
FILIP1L filamin A interacting protein 1-like -0.0353363
AHSG alpha-2-HS-glycoprotein -0.0352169
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0332152
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0330498
RPLP1 ribosomal protein, large, P1 -0.0320518
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0320052
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0319045
ARL5A ADP-ribosylation factor-like 5A -0.031797
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0316829
AMBP alpha-1-microglobulin/bikunin precursor -0.0309398
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0305554
RPS27A ribosomal protein S27a -0.0304562
GNAS GNAS complex locus -0.0304502
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0300179
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0298303
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0297702
SELENOP selenoprotein P -0.0291003
MBNL3 muscleblind-like splicing regulator 3 -0.0290983
TM9SF3 transmembrane 9 superfamily member 3 -0.0290779
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0290393
FTL ferritin, light polypeptide -0.0286055
IER3 immediate early response 3 -0.0285385
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0284985
SLC38A1 solute carrier family 38, member 1 -0.0284112
KPNB1 karyopherin (importin) beta 1 -0.0283193
NAP1L1 nucleosome assembly protein 1-like 1 -0.0279302
RSL1D1 ribosomal L1 domain containing 1 -0.0275159
RBM25 RNA binding motif protein 25 -0.0272615
HMGA2 high mobility group AT-hook 2 -0.027253
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0257091
GCC2 GRIP and coiled-coil domain containing 2 -0.0256402
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0253862
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0246504
RPL31 ribosomal protein L31 -0.0245506
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0244606
STK17A serine/threonine kinase 17a -0.0244191
ZMYND8 zinc finger, MYND-type containing 8 -0.0238492
CFB complement factor B -0.0237998
RPS5 ribosomal protein S5 -0.0237474
GLG1 golgi glycoprotein 1 -0.0231015
RPL12 ribosomal protein L12 -0.0227731
RIGI RNA sensor RIG-I -0.0227714
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0227555
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0222275
PEBP1 phosphatidylethanolamine binding protein 1 -0.0221337
TMEM263 transmembrane protein 263 -0.0219055
KIF5B kinesin family member 5B -0.0218061
RPL4 ribosomal protein L4 -0.0217626
LMAN1 lectin, mannose-binding, 1 -0.0216188
PEG10 paternally expressed 10 -0.0215042
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0214995
ZFHX3 zinc finger homeobox 3 -0.0214649
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0211216
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.021072