Cysteamine (hydrochloride)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EXT1 exostosin glycosyltransferase 1 0.142411
EFNA5 ephrin-A5 0.130572
MT2A metallothionein 2A 0.129105
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.128041
FTL ferritin, light polypeptide 0.0906494
ACTG1 actin gamma 1 0.0801877
SAMD4A sterile alpha motif domain containing 4A 0.0794328
RUNX1 runt-related transcription factor 1 0.0678823
PTPRG protein tyrosine phosphatase, receptor type, G 0.0671776
NAV1 neuron navigator 1 0.0649873
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0627336
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.062466
RPS6 ribosomal protein S6 0.0617909
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0604144
ASPH aspartate beta-hydroxylase 0.0598874
EGR1 early growth response 1 0.0597029
RPLP1 ribosomal protein, large, P1 0.0503959
NALF1 NALCN channel auxiliary factor 1 0.0483811
HDAC9 histone deacetylase 9 0.0482958
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0476763
KIAA1549L KIAA1549-like 0.0461037
HMGA2 high mobility group AT-hook 2 0.0459509
MAML2 mastermind-like 2 (Drosophila) 0.0454203
ALCAM activated leukocyte cell adhesion molecule 0.0452855
FLNA filamin A, alpha 0.0439342
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0430584
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.043031
PBX3 pre-B-cell leukemia homeobox 3 0.0427902
DTNA dystrobrevin, alpha 0.042747
PRKCE protein kinase C, epsilon 0.0420211
ZNF638 zinc finger protein 638 0.0408862
RPL28 ribosomal protein L28 0.0408538
SDCCAG8 serologically defined colon cancer antigen 8 0.0396449
JMJD1C jumonji domain containing 1C 0.0391782
MARCHF4 membrane associated ring-CH-type finger 4 0.0385294
RPS2 ribosomal protein S2 0.038291
HSPA8 heat shock 70kDa protein 8 0.037221
TLE4 transducin-like enhancer of split 4 0.0369772
PRKG1 protein kinase, cGMP-dependent, type I 0.0347516
CALD1 caldesmon 1 0.0343512
RPL27 ribosomal protein L27 0.0342697
ZSWIM6 zinc finger, SWIM-type containing 6 0.0334129
APLP2 amyloid beta (A4) precursor-like protein 2 0.033025
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0313315
NABP1 nucleic acid binding protein 1 0.0311452
SATB2 SATB homeobox 2 0.0309283
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0307645
GPHN gephyrin 0.0305948
RPS19 ribosomal protein S19 0.0303969
SAMD3 sterile alpha motif domain containing 3 0.0299953
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0299278
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0293649
CD44 CD44 molecule (Indian blood group) 0.0292025
MCL1 myeloid cell leukemia 1 0.0291672
MSN moesin 0.028743
ATXN1 ataxin 1 0.028727
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0282568
SRRM2 serine/arginine repetitive matrix 2 0.0277085
CD163L1 CD163 molecule-like 1 0.0270771
USP34 ubiquitin specific peptidase 34 0.0270718
FOXP1 forkhead box P1 0.0268642
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0267667
KDM2A lysine (K)-specific demethylase 2A 0.0266928
RPL36 ribosomal protein L36 0.0265733
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.026443
GLIS3 GLIS family zinc finger 3 0.0263151
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0261613
CCN2 cellular communication network factor 2 0.0259246
CREB5 cAMP responsive element binding protein 5 0.0252848
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0250997
DOCK1 dedicator of cytokinesis 1 0.0250475
GLIPR1 GLI pathogenesis-related 1 0.0249603
LOC112694756 uncharaterized LOC112694756 0.02461
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0245687
CMIP c-Maf inducing protein 0.0243769
BRD2 bromodomain containing 2 0.0240166
RPS12 ribosomal protein S12 0.023939
KLHL29 kelch-like family member 29 0.0235572
RPS20 ribosomal protein S20 0.0235223
RNF213 ring finger protein 213 0.023494
KIAA1217 KIAA1217 0.0234443
AGO2 argonaute RISC catalytic component 2 0.0232839
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.023179
DSCAM Down syndrome cell adhesion molecule 0.0227234
PTPRD protein tyrosine phosphatase, receptor type, D 0.0224176
INTS6 integrator complex subunit 6 0.0222767
BPTF bromodomain PHD finger transcription factor 0.0221402
KCNQ3 potassium channel, voltage gated KQT-like subfamily Q, member 3 0.0221122
SASH1 SAM and SH3 domain containing 1 0.0220992
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0220456
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0218975
MPRIP myosin phosphatase Rho interacting protein 0.0218841
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0217836
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0216396
TRIO trio Rho guanine nucleotide exchange factor 0.0216369
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0216219
RPL13A ribosomal protein L13a 0.0216012
MAPKAP1 mitogen-activated protein kinase associated protein 1 0.0215684
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0214638
NCOR2 nuclear receptor corepressor 2 0.021422

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.214606
PTMA prothymosin, alpha -0.129589
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.124589
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.107377
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.106186
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0899605
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0881227
MMP12 matrix metallopeptidase 12 -0.0852558
AKAP12 A kinase (PRKA) anchor protein 12 -0.0828022
UBC ubiquitin C -0.070849
NAMPT nicotinamide phosphoribosyltransferase -0.0693801
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0660067
KDM3A lysine (K)-specific demethylase 3A -0.0653352
TMSB10 thymosin beta 10 -0.0632459
SPAG9 sperm associated antigen 9 -0.0620405
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0618734
AHNAK AHNAK nucleoprotein -0.0611816
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.060884
ELL2 elongation factor, RNA polymerase II, 2 -0.0589936
RPS27A ribosomal protein S27a -0.0588406
LSAMP limbic system-associated membrane protein -0.0582157
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0579918
NUP58 nucleoporin 58 -0.0572378
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0553306
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0537073
CANX calnexin -0.0522188
RPS24 ribosomal protein S24 -0.0511299
ZNF292 zinc finger protein 292 -0.0501786
RAD21 RAD21 homolog (S. pombe) -0.0498358
FN1 fibronectin 1 -0.0497268
WSB1 WD repeat and SOCS box containing 1 -0.0485792
CD109 CD109 molecule -0.0465948
UGCG UDP-glucose ceramide glucosyltransferase -0.0455076
RBM39 RNA binding motif protein 39 -0.0432061
QKI QKI, KH domain containing, RNA binding -0.0429234
ZMYM2 zinc finger, MYM-type 2 -0.0428238
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0426451
RYBP RING1 and YY1 binding protein -0.0415275
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0410553
RLF rearranged L-myc fusion -0.0405523
RNF145 ring finger protein 145 -0.0399806
WAC WW domain containing adaptor with coiled-coil -0.0385463
NAP1L1 nucleosome assembly protein 1-like 1 -0.0383509
USP3 ubiquitin specific peptidase 3 -0.0381875
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0380337
WDR45B WD repeat domain 45B -0.0375063
ZNF207 zinc finger protein 207 -0.0368987
CDK17 cyclin-dependent kinase 17 -0.0366245
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0365135
ZFAND3 zinc finger, AN1-type domain 3 -0.0363646
ADAM9 ADAM metallopeptidase domain 9 -0.0360859
OGA O-GlcNAcase -0.035573
HELZ helicase with zinc finger -0.0354499
NCKAP1 NCK-associated protein 1 -0.0347161
FUBP1 far upstream element (FUSE) binding protein 1 -0.0342533
PNISR PNN-interacting serine/arginine-rich protein -0.0341477
FAM162A family with sequence similarity 162, member A -0.0341259
TFG TRK-fused gene -0.0341227
PCBP2 poly(rC) binding protein 2 -0.034114
ANXA2 annexin A2 -0.0338481
TMEM123 transmembrane protein 123 -0.0335374
SBF2 SET binding factor 2 -0.0331366
PUM2 pumilio RNA-binding family member 2 -0.0330973
PGK1 phosphoglycerate kinase 1 -0.0329022
PARD3 par-3 family cell polarity regulator -0.0327183
GARS1 glycyl-tRNA synthetase 1 -0.032649
FNDC3B fibronectin type III domain containing 3B -0.032625
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0324663
MARCHF6 membrane associated ring-CH-type finger 6 -0.0321538
KMT2E lysine (K)-specific methyltransferase 2E -0.0315928
APP amyloid beta (A4) precursor protein -0.0315118
NOP58 NOP58 ribonucleoprotein -0.0311918
SEPTIN7 septin 7 -0.0302936
PDIA3 protein disulfide isomerase family A, member 3 -0.0301552
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0301127
WDR43 WD repeat domain 43 -0.0295959
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0295313
PHIP pleckstrin homology domain interacting protein -0.0291591
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0289066
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0286472
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0283752
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0280443
GNAS GNAS complex locus -0.0280083
PDIA6 protein disulfide isomerase family A, member 6 -0.0278854
ECT2 epithelial cell transforming 2 -0.0278459
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0277187
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0274316
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0272488
PKM pyruvate kinase, muscle -0.0271353
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0269357
PAWR PRKC, apoptosis, WT1, regulator -0.0266636
RAB1A RAB1A, member RAS oncogene family -0.0265986
EPB41L2 erythrocyte membrane protein band 4.1-like 2 -0.0265171
MATR3 matrin 3 -0.0263855
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0262536
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0260852
SINHCAF SIN3-HDAC complex associated factor -0.0260193
TMEM263 transmembrane protein 263 -0.0260119
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0259946
IER3 immediate early response 3 -0.0258495