Cysteamine (hydrochloride)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MUC6 mucin 6, oligomeric mucus/gel-forming 0.194244
RPS6 ribosomal protein S6 0.102271
FAT1 FAT atypical cadherin 1 0.0879319
TNS4 tensin 4 0.0797039
FTH1 ferritin, heavy polypeptide 1 0.0739195
CEMIP cell migration inducing protein, hyaluronan binding 0.0689172
AREG amphiregulin 0.0681034
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0661181
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0641488
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0641
RPS2 ribosomal protein S2 0.0612488
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.0588342
MUC5AC mucin 5AC, oligomeric mucus/gel-forming 0.0586352
HSPA8 heat shock 70kDa protein 8 0.0572622
VEGFA vascular endothelial growth factor A 0.0558568
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0542411
RPS12 ribosomal protein S12 0.0524005
EEF2 eukaryotic translation elongation factor 2 0.0515384
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0482681
RPL3 ribosomal protein L3 0.0471132
ABHD2 abhydrolase domain containing 2 0.0423465
KTN1 kinectin 1 (kinesin receptor) 0.0411491
H1-0 H1.0 linker histone 0.0405073
SRRM2 serine/arginine repetitive matrix 2 0.040463
MYO1E myosin IE 0.0398973
POTEF POTE ankyrin domain family, member F 0.039183
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.037092
MYH9 myosin, heavy chain 9, non-muscle 0.0361017
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0359163
SOX9 SRY (sex determining region Y)-box 9 0.0356902
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.034999
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0335165
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0335032
ENO1 enolase 1, (alpha) 0.0334871
APLP2 amyloid beta (A4) precursor-like protein 2 0.0332389
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0330755
RPS3 ribosomal protein S3 0.0299463
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0295139
ATP5F1B ATP synthase F1 subunit beta 0.0293719
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.028075
PCBP2 poly(rC) binding protein 2 0.0275882
RPL27 ribosomal protein L27 0.0274421
NDRG1 N-myc downstream regulated 1 0.026863
TXNIP thioredoxin interacting protein 0.0263457
BRD2 bromodomain containing 2 0.0258705
TPM4 tropomyosin 4 0.0257109
CADPS Ca++-dependent secretion activator 0.0251336
LDHA lactate dehydrogenase A 0.0251227
ACTN4 actinin, alpha 4 0.025073
ITGB4 integrin, beta 4 0.0249869
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0249698
PTEN phosphatase and tensin homolog 0.0249063
MT2A metallothionein 2A 0.0248548
SLC38A2 solute carrier family 38, member 2 0.0247883
RPL21 ribosomal protein L21 0.024559
RNF145 ring finger protein 145 0.0241528
PDIA3 protein disulfide isomerase family A, member 3 0.0237906
RPS26 ribosomal protein S26 0.0236462
RPS8 ribosomal protein S8 0.0234231
EEF1G eukaryotic translation elongation factor 1 gamma 0.0232654
RPS27 ribosomal protein S27 0.0232366
LOC112694756 uncharaterized LOC112694756 0.0228909
SEPTIN9 septin 9 0.0228359
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0227903
PNN pinin, desmosome associated protein 0.0222262
MBNL1 muscleblind-like splicing regulator 1 0.0221897
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0221394
CEMIP2 cell migration inducing hyaluronidase 2 0.0219852
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0215034
PFN1 profilin 1 0.0213967
RPS29 ribosomal protein S29 0.0213142
CUX1 cut-like homeobox 1 0.0209556
RPL11 ribosomal protein L11 0.0209374
AKAP13 A kinase (PRKA) anchor protein 13 0.0209057
RPL37 ribosomal protein L37 0.0208924
NCOR2 nuclear receptor corepressor 2 0.0208286
MACF1 microtubule-actin crosslinking factor 1 0.0207595
TTC3 tetratricopeptide repeat domain 3 0.0206403
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0205699
VMP1 vacuole membrane protein 1 0.0203905
EIF5 eukaryotic translation initiation factor 5 0.0202901
CYB5R3 cytochrome b5 reductase 3 0.0201968
RREB1 ras responsive element binding protein 1 0.0201863
RNF43 ring finger protein 43 0.0200113
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0199485
SLK STE20-like kinase 0.0198463
RPL37A ribosomal protein L37a 0.0197576
MPRIP myosin phosphatase Rho interacting protein 0.0195946
MLEC malectin 0.0190803
SVIL supervillin 0.0190364
CD9 CD9 molecule 0.0188594
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0188155
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0187846
PLEC plectin 0.0187166
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.018683
HDGF hepatoma-derived growth factor 0.0184295
RPL28 ribosomal protein L28 0.0182675
FAM120A family with sequence similarity 120A 0.0181831
TMEM45B transmembrane protein 45B 0.017987
SET SET nuclear proto-oncogene 0.0179755

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.272117
TMSB10 thymosin beta 10 -0.190032
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.1002
NPSR1 neuropeptide S receptor 1 -0.0999511
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0947211
RPL35A ribosomal protein L35a -0.0706897
RPS24 ribosomal protein S24 -0.0676042
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0660895
RPLP1 ribosomal protein, large, P1 -0.0650332
TPT1 tumor protein, translationally-controlled 1 -0.0620476
RPL34 ribosomal protein L34 -0.0607366
EPCAM epithelial cell adhesion molecule -0.0502075
S100A6 S100 calcium binding protein A6 -0.0466456
KDM3A lysine (K)-specific demethylase 3A -0.0418473
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0414837
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0410217
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0407574
RRBP1 ribosome binding protein 1 -0.0392204
IER3 immediate early response 3 -0.0382256
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0374574
ANXA2 annexin A2 -0.03642
KRT18 keratin 18, type I -0.0354126
AGR2 anterior gradient 2 -0.0343873
LMNA lamin A/C -0.0323961
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0306182
LAMA4 laminin, alpha 4 -0.0305234
ABLIM1 actin binding LIM protein 1 -0.0302809
KLF5 Kruppel-like factor 5 (intestinal) -0.0284782
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B -0.0274894
SERINC5 serine incorporator 5 -0.0272456
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0265
TFRC transferrin receptor -0.0256557
DSG2 desmoglein 2 -0.0254124
RPL4 ribosomal protein L4 -0.0253743
CCND1 cyclin D1 -0.0253626
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0246815
NIPBL Nipped-B homolog (Drosophila) -0.0245982
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0245832
AHNAK AHNAK nucleoprotein -0.0245339
NFIA nuclear factor I/A -0.0242953
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0242195
GCC2 GRIP and coiled-coil domain containing 2 -0.0238679
NRN1 neuritin 1 -0.0233912
NPR2 natriuretic peptide receptor 2 -0.023313
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0225595
FERMT1 fermitin family member 1 -0.0222658
TFF3 trefoil factor 3 (intestinal) -0.0220806
HMGB1 high mobility group box 1 -0.0220597
RPL31 ribosomal protein L31 -0.0220355
OGA O-GlcNAcase -0.0215292
CDK6 cyclin-dependent kinase 6 -0.0211748
TUBB tubulin, beta class I -0.0210744
SOX4 SRY (sex determining region Y)-box 4 -0.0210679
RPLP0 ribosomal protein, large, P0 -0.0209918
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0207827
RPS5 ribosomal protein S5 -0.0207211
ARF1 ADP-ribosylation factor 1 -0.0205285
CBX3 chromobox homolog 3 -0.0202698
RPL36AL ribosomal protein L36a-like -0.0198778
GPHN gephyrin -0.0198402
PERP PERP, TP53 apoptosis effector -0.0197021
SLC35F3 solute carrier family 35, member F3 -0.0195091
BTG1 B-cell translocation gene 1, anti-proliferative -0.0194887
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.019469
RAB1A RAB1A, member RAS oncogene family -0.0192794
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0191452
RPL32 ribosomal protein L32 -0.0189001
KPNB1 karyopherin (importin) beta 1 -0.018857
H3-3B H3.3 histone B -0.0187986
UQCRQ ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa -0.0187601
NALF1 NALCN channel auxiliary factor 1 -0.0185619
TMEM123 transmembrane protein 123 -0.0184436
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0182469
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0180729
RPL19 ribosomal protein L19 -0.0180053
RSL1D1 ribosomal L1 domain containing 1 -0.0179704
MATR3 matrin 3 -0.0179548
RPL6 ribosomal protein L6 -0.01795
MXI1 MAX interactor 1, dimerization protein -0.0179398
RTN3 reticulon 3 -0.017837
RBM39 RNA binding motif protein 39 -0.0178315
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0177937
TMEM135 transmembrane protein 135 -0.0176777
HDAC2 histone deacetylase 2 -0.0176715
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0175876
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0175086
CANX calnexin -0.0174689
CRYBG1 crystallin beta-gamma domain containing 1 -0.0174538
NT5C2 5'-nucleotidase, cytosolic II -0.0172255
NAMPT nicotinamide phosphoribosyltransferase -0.0167551
CEP95 centrosomal protein 95kDa -0.0167473
RPL5 ribosomal protein L5 -0.0164002
TAS2R14 taste receptor, type 2, member 14 -0.0163793
SSR1 signal sequence receptor, alpha -0.0162658
IGFL2 IGF-like family member 2 -0.0162482
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0162247
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) -0.0161478
SLC38A1 solute carrier family 38, member 1 -0.0161153
ENOSF1 enolase superfamily member 1 -0.0161071
FHIT fragile histidine triad -0.0159114