Cysteamine (hydrochloride)_LoVo Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in LoVo cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_LoVo drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EZR ezrin 0.0922727
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0791145
DSPP dentin sialophosphoprotein 0.0711408
HSPA8 heat shock 70kDa protein 8 0.0705855
RPL3 ribosomal protein L3 0.0659008
MPRIP myosin phosphatase Rho interacting protein 0.0617497
CLDN4 claudin 4 0.0594407
RPS12 ribosomal protein S12 0.0571555
MYH9 myosin, heavy chain 9, non-muscle 0.0523603
EPHA2 EPH receptor A2 0.0499137
AREG amphiregulin 0.0496582
RPS2 ribosomal protein S2 0.0465482
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20 0.0460276
OXSR1 oxidative stress responsive 1 0.0457685
DIAPH1 diaphanous-related formin 1 0.0445016
HLA-A major histocompatibility complex, class I, A 0.0441478
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0435446
RIMKLB ribosomal modification protein rimK-like family member B 0.0434814
RPS6 ribosomal protein S6 0.0395509
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0387054
PCBP2 poly(rC) binding protein 2 0.0383735
RPL28 ribosomal protein L28 0.0382339
SLTM SAFB-like, transcription modulator 0.0365117
MYO5B myosin VB 0.0364843
CTBP2 C-terminal binding protein 2 0.0359999
LOC112694756 uncharaterized LOC112694756 0.035979
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0349855
UBE2H ubiquitin-conjugating enzyme E2H 0.0349325
MSI2 musashi RNA-binding protein 2 0.0346796
NCOR2 nuclear receptor corepressor 2 0.034168
AKAP13 A kinase (PRKA) anchor protein 13 0.0332293
RPL27 ribosomal protein L27 0.0326326
AFDN afadin, adherens junction formation factor 0.0322541
ACTG1 actin gamma 1 0.0312911
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0303593
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0301025
PRRC2C proline-rich coiled-coil 2C 0.0295403
BRD2 bromodomain containing 2 0.029061
POTEF POTE ankyrin domain family, member F 0.0289365
ESYT2 extended synaptotagmin-like protein 2 0.0282906
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0281108
LOC102724023 ES1 protein homolog, mitochondrial 0.0280584
GRB10 growth factor receptor-bound protein 10 0.0279891
KMT2D lysine (K)-specific methyltransferase 2D 0.0277807
ANXA11 annexin A11 0.0273933
RREB1 ras responsive element binding protein 1 0.0273153
ZNF638 zinc finger protein 638 0.0272998
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0271257
EIF4A2 eukaryotic translation initiation factor 4A2 0.0267119
DOCK5 dedicator of cytokinesis 5 0.0263611
LOC105378220 macrophage receptor MARCO-like 0.0261841
TXNIP thioredoxin interacting protein 0.02604
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.025975
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0257825
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0257697
LGALS12 lectin, galactoside-binding, soluble, 12 0.0254771
RBM25 RNA binding motif protein 25 0.0254676
PABPC1 poly(A) binding protein, cytoplasmic 1 0.025344
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0250422
SLK STE20-like kinase 0.0248658
PTBP3 polypyrimidine tract binding protein 3 0.024612
FLNB filamin B, beta 0.0244207
SRPK2 SRSF protein kinase 2 0.0244089
MUC13 mucin 13, cell surface associated 0.0243882
TC2N tandem C2 domains, nuclear 0.0242178
PLEC plectin 0.0239931
RPL21 ribosomal protein L21 0.0239185
RPL37 ribosomal protein L37 0.023795
KMT2C lysine (K)-specific methyltransferase 2C 0.023673
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0234196
MT2A metallothionein 2A 0.023419
WAC WW domain containing adaptor with coiled-coil 0.0233954
SEPTIN9 septin 9 0.023097
FRMD5 FERM domain containing 5 0.0228758
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa 0.0227242
PLAUR plasminogen activator, urokinase receptor 0.0224327
SLMAP sarcolemma associated protein 0.0223693
TSC22D2 TSC22 domain family, member 2 0.0223647
TJP1 tight junction protein 1 0.0223167
EIF4B eukaryotic translation initiation factor 4B 0.0218985
HLA-B major histocompatibility complex, class I, B 0.0218459
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0218451
PICALM phosphatidylinositol binding clathrin assembly protein 0.0217463
STRIP2 striatin interacting protein 2 0.0216498
SRRM2 serine/arginine repetitive matrix 2 0.0216015
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0215361
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0215046
H1-0 H1.0 linker histone 0.0214709
VASP vasodilator-stimulated phosphoprotein 0.0211896
RBM6 RNA binding motif protein 6 0.0207226
ITPRID2 ITPR interacting domain containing 2 0.0206057
UBE2R2 ubiquitin-conjugating enzyme E2R 2 0.020582
KRT19 keratin 19, type I 0.0205291
SPTBN1 spectrin, beta, non-erythrocytic 1 0.020414
B4GALT1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 0.0203523
UBE2E1 ubiquitin-conjugating enzyme E2E 1 0.0201542
KTN1 kinectin 1 (kinesin receptor) 0.0200316
ITGB4 integrin, beta 4 0.0199434
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0199431
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0198902

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.226091
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.187257
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.166227
RPLP1 ribosomal protein, large, P1 -0.123412
PTPRR protein tyrosine phosphatase, receptor type, R -0.106178
TPT1 tumor protein, translationally-controlled 1 -0.0949327
RPS24 ribosomal protein S24 -0.0880705
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0873085
RPL34 ribosomal protein L34 -0.0829165
RPL35A ribosomal protein L35a -0.0807264
PDE4D phosphodiesterase 4D, cAMP-specific -0.0785133
PTMA prothymosin, alpha -0.075314
RPL4 ribosomal protein L4 -0.07518
CANX calnexin -0.0734566
KLF5 Kruppel-like factor 5 (intestinal) -0.0711712
LMO7 LIM domain 7 -0.0703109
AGR2 anterior gradient 2 -0.0702259
TMSB10 thymosin beta 10 -0.0610968
GMDS GDP-mannose 4,6-dehydratase -0.0609616
RPLP0 ribosomal protein, large, P0 -0.0596801
TSPAN8 tetraspanin 8 -0.0590974
RPL31 ribosomal protein L31 -0.0581942
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0552056
VCL vinculin -0.0538984
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0537346
PDIA3 protein disulfide isomerase family A, member 3 -0.0535387
RPS8 ribosomal protein S8 -0.0519538
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0500938
RPS27A ribosomal protein S27a -0.0497348
TAS2R14 taste receptor, type 2, member 14 -0.0479827
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0479157
RPS25 ribosomal protein S25 -0.0460267
PTPRK protein tyrosine phosphatase, receptor type, K -0.0445184
RPS5 ribosomal protein S5 -0.0437505
F3 coagulation factor III (thromboplastin, tissue factor) -0.0429004
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) -0.0416112
HDLBP high density lipoprotein binding protein -0.0409306
BACE2 beta-site APP-cleaving enzyme 2 -0.0406852
PTPRB protein tyrosine phosphatase, receptor type, B -0.0397288
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0391783
RPS23 ribosomal protein S23 -0.0389013
GOLGB1 golgin B1 -0.0386095
RPL9 ribosomal protein L9 -0.0382878
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0382326
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0376235
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0373732
GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type -0.0371918
PLAC8 placenta-specific 8 -0.0368275
TXNRD1 thioredoxin reductase 1 -0.0367309
CLINT1 clathrin interactor 1 -0.0359792
PRELID2 PRELI domain containing 2 -0.0355066
RRBP1 ribosome binding protein 1 -0.0348372
SERINC5 serine incorporator 5 -0.0348074
NPR2 natriuretic peptide receptor 2 -0.034739
PDIA4 protein disulfide isomerase family A, member 4 -0.0343937
MON2 MON2 homolog (S. cerevisiae) -0.0335137
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0325496
PKP2 plakophilin 2 -0.0323515
CCPG1 cell cycle progression 1 -0.0316873
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0316823
RPL32 ribosomal protein L32 -0.0316311
EEF1B2 eukaryotic translation elongation factor 1 beta 2 -0.0313534
P3H2 prolyl 3-hydroxylase 2 -0.0308445
PALLD palladin, cytoskeletal associated protein -0.0305385
RPL38 ribosomal protein L38 -0.0304132
RPL7 ribosomal protein L7 -0.0300074
LDHA lactate dehydrogenase A -0.0295264
PIK3AP1 phosphoinositide-3-kinase adaptor protein 1 -0.029357
SLC38A1 solute carrier family 38, member 1 -0.0292771
SEC24D SEC24 family member D -0.0285156
RPS16 ribosomal protein S16 -0.0284978
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0284419
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0281656
RPS17 ribosomal protein S17 -0.0281061
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0278835
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0268964
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) -0.0267379
CLTC clathrin, heavy chain (Hc) -0.0263912
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0262144
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0260233
DSG2 desmoglein 2 -0.0259361
SSR1 signal sequence receptor, alpha -0.0257387
AKAP9 A kinase (PRKA) anchor protein 9 -0.0253838
SEC31A SEC31 homolog A (S. cerevisiae) -0.0253665
NPSR1 neuropeptide S receptor 1 -0.0252267
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0250553
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0249404
BTBD9 BTB (POZ) domain containing 9 -0.024808
SPON1 spondin 1, extracellular matrix protein -0.0243893
RAD51B RAD51 paralog B -0.0243536
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0242277
EGFR epidermal growth factor receptor -0.0242125
STK17A serine/threonine kinase 17a -0.0241121
RACK1 receptor for activated C kinase 1 -0.0240093
RFX3 regulatory factor X, 3 (influences HLA class II expression) -0.0239758
MYO1D myosin ID -0.0239265
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0236361
AOPEP aminopeptidase O (putative) -0.0234167
XPOT exportin, tRNA -0.023318
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0230045