Cysteamine (hydrochloride)_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NTM neurotrimin 0.0888226
PEG10 paternally expressed 10 0.0886567
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0856639
TRIO trio Rho guanine nucleotide exchange factor 0.0841596
ZEB2 zinc finger E-box binding homeobox 2 0.0752903
FNDC3B fibronectin type III domain containing 3B 0.0751212
KMT2C lysine (K)-specific methyltransferase 2C 0.0717546
APP amyloid beta (A4) precursor protein 0.0675419
COL5A2 collagen, type V, alpha 2 0.0634497
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0577259
PGAP1 post-GPI attachment to proteins 1 0.0542505
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0541167
ADAM9 ADAM metallopeptidase domain 9 0.0530744
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0514788
HP1BP3 heterochromatin protein 1, binding protein 3 0.0502129
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0483709
ENAH enabled homolog (Drosophila) 0.0475114
SAMD4A sterile alpha motif domain containing 4A 0.0468951
SPAG9 sperm associated antigen 9 0.0467911
ANKRD33B ankyrin repeat domain 33B 0.0467898
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0453925
KIF1B kinesin family member 1B 0.0445304
CENPF centromere protein F, 350/400kDa 0.0437591
NOP58 NOP58 ribonucleoprotein 0.042145
APLP2 amyloid beta (A4) precursor-like protein 2 0.0405125
PARD3B par-3 family cell polarity regulator beta 0.0400907
TTC28 tetratricopeptide repeat domain 28 0.0394349
TSC22D2 TSC22 domain family, member 2 0.0394292
FNDC3A fibronectin type III domain containing 3A 0.0389394
RPL3 ribosomal protein L3 0.0380473
EEF2 eukaryotic translation elongation factor 2 0.0377964
JMJD1C jumonji domain containing 1C 0.0377122
SRPK2 SRSF protein kinase 2 0.0374152
ZFAND3 zinc finger, AN1-type domain 3 0.0373142
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0365299
TRAK1 trafficking protein, kinesin binding 1 0.0360214
KDM6A lysine (K)-specific demethylase 6A 0.0358293
EIF3A eukaryotic translation initiation factor 3, subunit A 0.035783
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0356776
MED13L mediator complex subunit 13-like 0.0346872
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0343427
WDR43 WD repeat domain 43 0.033935
ZNF462 zinc finger protein 462 0.0334075
OSBPL10 oxysterol binding protein-like 10 0.0328919
EVI5 ecotropic viral integration site 5 0.0327928
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0326819
UTRN utrophin 0.0319251
PLPP1 phospholipid phosphatase 1 0.0317733
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0315182
TRPS1 trichorhinophalangeal syndrome I 0.0315156
IGF1R insulin-like growth factor 1 receptor 0.0306989
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0306492
SLC38A2 solute carrier family 38, member 2 0.0305682
CHD7 chromodomain helicase DNA binding protein 7 0.0303464
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0296447
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 0.0292613
GPHN gephyrin 0.0290756
DSCAM Down syndrome cell adhesion molecule 0.0289448
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0280513
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0278312
SEC31A SEC31 homolog A (S. cerevisiae) 0.0278263
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0276733
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0276245
FMNL2 formin-like 2 0.0275995
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0275707
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0274942
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.0274586
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0272138
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0272105
RAB7A RAB7A, member RAS oncogene family 0.0258618
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 0.0257915
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0256792
DOCK5 dedicator of cytokinesis 5 0.0254807
H1-0 H1.0 linker histone 0.0254663
RNF213 ring finger protein 213 0.0254631
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0254042
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0251996
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0250433
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0246464
ANKFY1 ankyrin repeat and FYVE domain containing 1 0.024593
ATP5F1B ATP synthase F1 subunit beta 0.0245042
CDC14A cell division cycle 14A 0.0245008
ARID1A AT rich interactive domain 1A (SWI-like) 0.024294
PAPOLA poly(A) polymerase alpha 0.0239587
SYT1 synaptotagmin I 0.0239237
FAT1 FAT atypical cadherin 1 0.0237881
ZNF608 zinc finger protein 608 0.0237567
WDFY3 WD repeat and FYVE domain containing 3 0.0237318
TTC17 tetratricopeptide repeat domain 17 0.0237064
PCBP2 poly(rC) binding protein 2 0.0236811
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0236214
MAML2 mastermind-like 2 (Drosophila) 0.0235816
MB21D2 Mab-21 domain containing 2 0.0234108
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0233983
ECT2 epithelial cell transforming 2 0.0233299
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0233243
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0231362
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0231285
SKIC3 SKI3 subunit of superkiller complex 0.0230599
FAM135A family with sequence similarity 135, member A 0.0229906

decreased expression

Symbol Name Standardized Value
PCDH9 protocadherin 9 -0.146503
TMSB10 thymosin beta 10 -0.126926
PTMA prothymosin, alpha -0.119209
GPC3 glypican 3 -0.117241
VIM vimentin -0.099862
CADM2 cell adhesion molecule 2 -0.0993394
CDH10 cadherin 10, type 2 (T2-cadherin) -0.095387
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0876064
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0805595
COL3A1 collagen, type III, alpha 1 -0.0799286
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0749952
ADGRV1 adhesion G protein-coupled receptor V1 -0.0676214
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0592032
PCLO piccolo presynaptic cytomatrix protein -0.0569001
RPLP1 ribosomal protein, large, P1 -0.0559011
COL11A1 collagen, type XI, alpha 1 -0.0553806
RPS8 ribosomal protein S8 -0.0553221
MEIS2 Meis homeobox 2 -0.0551878
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0543015
FST follistatin -0.0504555
RPL35A ribosomal protein L35a -0.0496001
DMD dystrophin -0.0482919
KDM3A lysine (K)-specific demethylase 3A -0.0428044
GREB1L growth regulation by estrogen in breast cancer-like -0.0416746
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0411707
RPLP0 ribosomal protein, large, P0 -0.0409527
LDHA lactate dehydrogenase A -0.0398371
PHIP pleckstrin homology domain interacting protein -0.0398237
USH2A Usher syndrome 2A (autosomal recessive, mild) -0.0393718
KCTD16 potassium channel tetramerization domain containing 16 -0.0391038
CALR calreticulin -0.0383775
RPL31 ribosomal protein L31 -0.0380256
RPS24 ribosomal protein S24 -0.036732
GNAS GNAS complex locus -0.036511
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0364367
NCAM2 neural cell adhesion molecule 2 -0.0357572
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0350369
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0350311
S100A10 S100 calcium binding protein A10 -0.034871
WSB1 WD repeat and SOCS box containing 1 -0.033479
RASAL2 RAS protein activator like 2 -0.033119
DDIT4 DNA-damage-inducible transcript 4 -0.0326097
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0322692
ITGAV integrin, alpha V -0.0320426
TUBA1B tubulin, alpha 1b -0.0319745
MYL12B myosin, light chain 12B, regulatory -0.0319159
PRELID2 PRELI domain containing 2 -0.0315588
RPS13 ribosomal protein S13 -0.0314228
RPS21 ribosomal protein S21 -0.0312435
FTL ferritin, light polypeptide -0.0297542
ADGRL2 adhesion G protein-coupled receptor L2 -0.0293007
ARHGAP15 Rho GTPase activating protein 15 -0.0289139
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0287235
RPS25 ribosomal protein S25 -0.0286686
UPP1 uridine phosphorylase 1 -0.0281737
RAI1 retinoic acid induced 1 -0.0278481
TPT1 tumor protein, translationally-controlled 1 -0.0278268
TNRC6B trinucleotide repeat containing 6B -0.0274911
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0274011
TFRC transferrin receptor -0.027155
DLG1 discs, large homolog 1 (Drosophila) -0.0270787
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0268854
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0266925
PALLD palladin, cytoskeletal associated protein -0.0263005
PGK1 phosphoglycerate kinase 1 -0.0261248
RAB1A RAB1A, member RAS oncogene family -0.0261061
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0258674
NDRG1 N-myc downstream regulated 1 -0.0257667
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0257484
RPL7A ribosomal protein L7a -0.0256869
RPL34 ribosomal protein L34 -0.0256329
SHPRH SNF2 histone linker PHD RING helicase, E3 ubiquitin protein ligase -0.0255113
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.025348
TXNRD1 thioredoxin reductase 1 -0.0251868
LOC102724023 ES1 protein homolog, mitochondrial -0.024631
NAP1L1 nucleosome assembly protein 1-like 1 -0.0245314
RPS19 ribosomal protein S19 -0.0238096
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0236104
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0234227
RTN3 reticulon 3 -0.0232019
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0231747
HMGA1 high mobility group AT-hook 1 -0.0231678
CHD1 chromodomain helicase DNA binding protein 1 -0.0230354
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0230013
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0229757
HMGA2 high mobility group AT-hook 2 -0.0229322
TLK1 tousled-like kinase 1 -0.0227608
SRP72 signal recognition particle 72kDa -0.0226813
EIF1 eukaryotic translation initiation factor 1 -0.0226442
CBX3 chromobox homolog 3 -0.0226409
HM13 histocompatibility (minor) 13 -0.0225976
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0225536
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0224996
ELP4 elongator acetyltransferase complex subunit 4 -0.0222058
APOE apolipoprotein E -0.0221743
TSPAN12 tetraspanin 12 -0.0221437
EXOC2 exocyst complex component 2 -0.021882
SPDYA speedy/RINGO cell cycle regulator family member A -0.0217943
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 -0.0217312
RPS23 ribosomal protein S23 -0.0216741