Cysteamine (hydrochloride)_RPMI-7951 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in RPMI-7951 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_RPMI-7951 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HLA-B major histocompatibility complex, class I, B 0.176181
COL6A2 collagen, type VI, alpha 2 0.138949
COL6A1 collagen, type VI, alpha 1 0.107474
TGFBI transforming growth factor, beta-induced, 68kDa 0.0897422
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.086642
IGFBP3 insulin-like growth factor binding protein 3 0.0825331
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0818017
COL7A1 collagen, type VII, alpha 1 0.0781873
COL5A1 collagen, type V, alpha 1 0.0749072
HLA-A major histocompatibility complex, class I, A 0.0731253
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0717324
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0694846
PSD3 pleckstrin and Sec7 domain containing 3 0.0679711
FTH1 ferritin, heavy polypeptide 1 0.0658541
MMP2 matrix metallopeptidase 2 0.0653041
CEMIP cell migration inducing protein, hyaluronan binding 0.0627976
JARID2 jumonji, AT rich interactive domain 2 0.0624615
TMEM178B transmembrane protein 178B 0.0609466
SMAD3 SMAD family member 3 0.0595513
STC1 stanniocalcin 1 0.0587729
NAV1 neuron navigator 1 0.0583099
FAM20C family with sequence similarity 20, member C 0.0583086
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0580729
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0580085
VEGFA vascular endothelial growth factor A 0.0551251
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0520288
LOXL2 lysyl oxidase-like 2 0.0514586
B2M beta-2-microglobulin 0.0504558
ECE1 endothelin converting enzyme 1 0.0499683
EML5 echinoderm microtubule associated protein like 5 0.0498991
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0493054
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0469021
IFI44L interferon-induced protein 44-like 0.0442595
ANGPTL4 angiopoietin-like 4 0.0435345
TENT5A terminal nucleotidyltransferase 5A 0.0430375
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0425528
SPTBN1 spectrin, beta, non-erythrocytic 1 0.04175
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0417216
MTSS1 metastasis suppressor 1 0.0407343
PLEC plectin 0.0399373
COL5A3 collagen, type V, alpha 3 0.0399206
TGM2 transglutaminase 2 0.0398457
SVIL supervillin 0.0379329
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0377789
CADM1 cell adhesion molecule 1 0.0375519
NRP1 neuropilin 1 0.0374774
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.034971
PCBP3 poly(rC) binding protein 3 0.0348934
WWTR1 WW domain containing transcription regulator 1 0.0345757
H1-0 H1.0 linker histone 0.034171
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0337967
SEPTIN9 septin 9 0.0337469
HPCAL1 hippocalcin-like 1 0.0337251
SFTPA2 surfactant protein A2 0.0336498
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.032938
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0328223
NPAS2 neuronal PAS domain protein 2 0.0324707
MCL1 myeloid cell leukemia 1 0.0322205
APCDD1L adenomatosis polyposis coli down-regulated 1-like 0.0314315
GRB10 growth factor receptor-bound protein 10 0.0310116
RPS6 ribosomal protein S6 0.0307252
TRIO trio Rho guanine nucleotide exchange factor 0.0307049
HSPA8 heat shock 70kDa protein 8 0.030302
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0301619
EGR1 early growth response 1 0.0297038
LOC112694756 uncharaterized LOC112694756 0.0287855
IFI6 interferon, alpha-inducible protein 6 0.0287614
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0285099
ZMIZ1 zinc finger, MIZ-type containing 1 0.028356
AGRN agrin 0.0282925
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.0277754
COL4A1 collagen, type IV, alpha 1 0.0277037
SQSTM1 sequestosome 1 0.0276981
HMGA2 high mobility group AT-hook 2 0.02765
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0275618
ATP13A3 ATPase type 13A3 0.0275456
FAT1 FAT atypical cadherin 1 0.0273177
NRIP1 nuclear receptor interacting protein 1 0.0269094
MX2 MX dynamin-like GTPase 2 0.0267741
HDAC9 histone deacetylase 9 0.0267562
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0267524
APLP2 amyloid beta (A4) precursor-like protein 2 0.0265227
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0264605
C1D C1D nuclear receptor corepressor 0.0264406
PLD3 phospholipase D family, member 3 0.0263105
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0257522
FGFR1 fibroblast growth factor receptor 1 0.0257205
RPL28 ribosomal protein L28 0.0255651
FHIT fragile histidine triad 0.0253915
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0250041
APP amyloid beta (A4) precursor protein 0.0248247
RNF213 ring finger protein 213 0.0247957
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.024607
LOC102724023 ES1 protein homolog, mitochondrial 0.0243331
CAMTA1 calmodulin binding transcription activator 1 0.0242852
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0242686
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0240052
HLA-E major histocompatibility complex, class I, E 0.0239828
STK10 serine/threonine kinase 10 0.0238333
AEBP1 AE binding protein 1 0.0232579

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.223738
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.119192
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.104134
TMSB10 thymosin beta 10 -0.0927076
NDRG1 N-myc downstream regulated 1 -0.0889416
PTMA prothymosin, alpha -0.0770148
CENPF centromere protein F, 350/400kDa -0.0723901
PKM pyruvate kinase, muscle -0.0716621
PGK1 phosphoglycerate kinase 1 -0.0613502
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0607441
TIMP3 TIMP metallopeptidase inhibitor 3 -0.054586
ZNF292 zinc finger protein 292 -0.0532484
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0500653
ANLN anillin, actin binding protein -0.0491417
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0462167
KDM3A lysine (K)-specific demethylase 3A -0.0452929
TFPI2 tissue factor pathway inhibitor 2 -0.0446054
RBM39 RNA binding motif protein 39 -0.0435749
SMC4 structural maintenance of chromosomes 4 -0.04344
SEPTIN7 septin 7 -0.0432374
TPX2 TPX2, microtubule-associated -0.0419878
THBS1 thrombospondin 1 -0.0395297
MKI67 marker of proliferation Ki-67 -0.0382942
FTL ferritin, light polypeptide -0.0381377
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0378313
FNDC3B fibronectin type III domain containing 3B -0.0375432
GOLGA4 golgin A4 -0.0362921
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.036041
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0345261
NAMPT nicotinamide phosphoribosyltransferase -0.0340334
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0338595
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.033414
ZEB1 zinc finger E-box binding homeobox 1 -0.031964
RRBP1 ribosome binding protein 1 -0.0312534
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0312327
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0311549
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0311521
DIAPH3 diaphanous-related formin 3 -0.0305459
RAD21 RAD21 homolog (S. pombe) -0.0305447
CALD1 caldesmon 1 -0.0305177
XPO1 exportin 1 -0.0302591
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0301912
IER3 immediate early response 3 -0.02987
HMGB2 high mobility group box 2 -0.0297144
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0296655
MORF4L2 mortality factor 4 like 2 -0.0292788
FKBP1A FK506 binding protein 1A, 12kDa -0.0291495
TFG TRK-fused gene -0.0284311
POTEF POTE ankyrin domain family, member F -0.0281167
SPAG9 sperm associated antigen 9 -0.0276274
KMT2E lysine (K)-specific methyltransferase 2E -0.027343
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0273428
CLTC clathrin, heavy chain (Hc) -0.027184
GARS1 glycyl-tRNA synthetase 1 -0.026796
RPS24 ribosomal protein S24 -0.0267537
SGO2 shugoshin 2 -0.0267479
ZMYND8 zinc finger, MYND-type containing 8 -0.0263624
MATR3 matrin 3 -0.0260879
SEC24D SEC24 family member D -0.0259628
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0258842
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0257707
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0256821
CENPE centromere protein E, 312kDa -0.0251229
TMEM263 transmembrane protein 263 -0.0251169
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0250725
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0248857
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.024715
CBX3 chromobox homolog 3 -0.024334
EYA1 EYA transcriptional coactivator and phosphatase 1 -0.0243249
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.024263
RYBP RING1 and YY1 binding protein -0.0241966
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0237968
ECT2 epithelial cell transforming 2 -0.0236718
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0236258
INHBA inhibin, beta A -0.0235857
KIF4A kinesin family member 4A -0.0230712
CKAP5 cytoskeleton associated protein 5 -0.0229891
CKAP2 cytoskeleton associated protein 2 -0.0228868
QKI QKI, KH domain containing, RNA binding -0.0227585
RSRC1 arginine/serine-rich coiled-coil 1 -0.0226693
CDH13 cadherin 13 -0.0225047
CLINT1 clathrin interactor 1 -0.0225008
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0221759
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0221405
PDE4D phosphodiesterase 4D, cAMP-specific -0.0221084
GNAS GNAS complex locus -0.0217641
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0214831
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0212879
FAM162A family with sequence similarity 162, member A -0.0212544
RAB2A RAB2A, member RAS oncogene family -0.0211788
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0209566
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.020895
TOP2B topoisomerase (DNA) II beta 180kDa -0.020844
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0204275
FN1 fibronectin 1 -0.0204052
ITGA1 integrin, alpha 1 -0.0203514
TPM4 tropomyosin 4 -0.020318
TKT transketolase -0.0202306
NUSAP1 nucleolar and spindle associated protein 1 -0.0200887
DLG1 discs, large homolog 1 (Drosophila) -0.0200391