Cysteamine (hydrochloride)_SHP-77 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in SHP-77 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_SHP-77 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SNAP25 synaptosomal-associated protein, 25kDa 0.0976615
MCL1 myeloid cell leukemia 1 0.0962206
SMOC1 SPARC related modular calcium binding 1 0.0814743
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0630883
DOCK5 dedicator of cytokinesis 5 0.0496911
COL22A1 collagen, type XXII, alpha 1 0.0464962
NBEA neurobeachin 0.0437818
RPL37A ribosomal protein L37a 0.0425006
PDE10A phosphodiesterase 10A 0.0424929
GPC6 glypican 6 0.0417566
MYH9 myosin, heavy chain 9, non-muscle 0.040914
FNDC3A fibronectin type III domain containing 3A 0.0392457
SMYD3 SET and MYND domain containing 3 0.0378348
STC1 stanniocalcin 1 0.0372459
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0371469
SLC38A2 solute carrier family 38, member 2 0.0369187
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0346985
DGKD diacylglycerol kinase, delta 130kDa 0.0346029
PNN pinin, desmosome associated protein 0.0341185
APLP2 amyloid beta (A4) precursor-like protein 2 0.0339886
CPE carboxypeptidase E 0.0338267
SIK2 salt-inducible kinase 2 0.0337726
ZFHX3 zinc finger homeobox 3 0.0336612
EFNA5 ephrin-A5 0.0335176
ZSWIM6 zinc finger, SWIM-type containing 6 0.0331267
TTC19 tetratricopeptide repeat domain 19 0.0330017
NAV2 neuron navigator 2 0.0314134
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0306292
RORA RAR-related orphan receptor A 0.0302845
CALCA calcitonin-related polypeptide alpha 0.0302693
SCFD1 sec1 family domain containing 1 0.0294891
SDK1 sidekick cell adhesion molecule 1 0.0292545
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0284174
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0277333
CEMIP cell migration inducing protein, hyaluronan binding 0.0269551
SETX senataxin 0.0269248
ASPH aspartate beta-hydroxylase 0.0268377
PELI2 pellino E3 ubiquitin protein ligase family member 2 0.026504
NRG1 neuregulin 1 0.0261804
POTEF POTE ankyrin domain family, member F 0.0259763
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0258157
TMEM255B transmembrane protein 255B 0.0257843
LINGO2 leucine rich repeat and Ig domain containing 2 0.0256225
RPS12 ribosomal protein S12 0.0255603
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0250152
AKAP13 A kinase (PRKA) anchor protein 13 0.0244206
RPS6 ribosomal protein S6 0.0238028
PHF14 PHD finger protein 14 0.0237725
RNPS1 RNA binding protein S1, serine-rich domain 0.0237656
GSE1 Gse1 coiled-coil protein 0.0236862
MSN moesin 0.0236443
VEGFA vascular endothelial growth factor A 0.0236188
KIF26B kinesin family member 26B 0.023364
EIF3A eukaryotic translation initiation factor 3, subunit A 0.023224
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0231205
SRRM2 serine/arginine repetitive matrix 2 0.02306
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0230525
SFPQ splicing factor proline/glutamine-rich 0.0226985
MPRIP myosin phosphatase Rho interacting protein 0.022662
SIK3 SIK family kinase 3 0.0224648
BCLAF1 BCL2-associated transcription factor 1 0.0224131
PAEP progestagen-associated endometrial protein 0.0223809
MCTP1 multiple C2 domains, transmembrane 1 0.0222747
GRB10 growth factor receptor-bound protein 10 0.0222457
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0221441
LCOR ligand dependent nuclear receptor corepressor 0.0218577
NSUN6 NOP2/Sun domain family, member 6 0.0216807
ASCL1 achaete-scute family bHLH transcription factor 1 0.0214592
AP1S3 adaptor-related protein complex 1, sigma 3 subunit 0.0212125
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.02103
TOP1 topoisomerase (DNA) I 0.0209519
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0209488
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0209362
BACE2 beta-site APP-cleaving enzyme 2 0.0208135
RPS2 ribosomal protein S2 0.0207345
INTS1 integrator complex subunit 1 0.0206128
KMT2D lysine (K)-specific methyltransferase 2D 0.0205644
EIF5B eukaryotic translation initiation factor 5B 0.0205627
SRSF4 serine/arginine-rich splicing factor 4 0.0205287
BIRC6 baculoviral IAP repeat containing 6 0.020471
SCFD2 sec1 family domain containing 2 0.0202364
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0200652
INHBA inhibin, beta A 0.0200118
SVIL supervillin 0.019609
INTS6 integrator complex subunit 6 0.019597
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0195111
LPP LIM domain containing preferred translocation partner in lipoma 0.0190096
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0189739
TRA2B transformer 2 beta homolog (Drosophila) 0.0189739
ATF6 activating transcription factor 6 0.018879
KTN1 kinectin 1 (kinesin receptor) 0.0188516
FAM13A family with sequence similarity 13, member A 0.0187039
PARD3 par-3 family cell polarity regulator 0.0185849
GRAMD1B GRAM domain containing 1B 0.0185661
NANOS1 nanos homolog 1 (Drosophila) 0.018344
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0182748
AUTS2 autism susceptibility candidate 2 0.0181166
GNL3L guanine nucleotide binding protein-like 3 (nucleolar)-like 0.0180177
TACC2 transforming, acidic coiled-coil containing protein 2 0.0180046
VAV2 vav 2 guanine nucleotide exchange factor 0.0179701

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.169726
TENM1 teneurin transmembrane protein 1 -0.130441
PEG10 paternally expressed 10 -0.116659
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.103543
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0974239
CENPF centromere protein F, 350/400kDa -0.0828495
ENO1 enolase 1, (alpha) -0.0780299
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0649497
RAD21 RAD21 homolog (S. pombe) -0.064048
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0616517
MKI67 marker of proliferation Ki-67 -0.0581275
GPC5 glypican 5 -0.0570216
IGFBP5 insulin-like growth factor binding protein 5 -0.0560833
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0520983
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0511525
NIPSNAP2 nipsnap homolog 2 -0.0507513
TMSB4X thymosin beta 4, X-linked -0.0503852
SNTG1 syntrophin, gamma 1 -0.0474386
PGK1 phosphoglycerate kinase 1 -0.0472898
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0446543
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0437376
H1-0 H1.0 linker histone -0.0430666
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0430308
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0416247
RIT2 Ras-like without CAAX 2 -0.041531
CKAP5 cytoskeleton associated protein 5 -0.0403564
KDM3A lysine (K)-specific demethylase 3A -0.0396908
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2 -0.0392546
FOXC1 forkhead box C1 -0.0386841
SINHCAF SIN3-HDAC complex associated factor -0.03854
PCDH9 protocadherin 9 -0.0382165
NIPBL Nipped-B homolog (Drosophila) -0.0381898
TUBB tubulin, beta class I -0.0375023
CDH12 cadherin 12, type 2 (N-cadherin 2) -0.0372596
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0370548
PCSK1 proprotein convertase subtilisin/kexin type 1 -0.0369311
ZNF292 zinc finger protein 292 -0.036228
SCG2 secretogranin II -0.0359281
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0357983
NAMPT nicotinamide phosphoribosyltransferase -0.0355587
RPL4 ribosomal protein L4 -0.0353895
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0351426
SASH1 SAM and SH3 domain containing 1 -0.0345991
UBB ubiquitin B -0.0345269
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0342688
GNAS GNAS complex locus -0.0341996
FTL ferritin, light polypeptide -0.0336804
MAP1B microtubule-associated protein 1B -0.0333042
TPR translocated promoter region, nuclear basket protein -0.0331717
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0324785
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0316694
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0313265
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.030721
ADGRL2 adhesion G protein-coupled receptor L2 -0.0303084
TKT transketolase -0.030095
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0299774
KNL1 kinetochore scaffold 1 -0.0297625
RPL6 ribosomal protein L6 -0.0297085
SRP72 signal recognition particle 72kDa -0.0294516
KIAA0825 KIAA0825 -0.0292241
NCOR1 nuclear receptor corepressor 1 -0.0286442
AGBL4 ATP/GTP binding protein-like 4 -0.028512
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0283926
MXI1 MAX interactor 1, dimerization protein -0.0280552
SGO2 shugoshin 2 -0.0275043
HMGB1 high mobility group box 1 -0.0274586
NCKAP5 NCK-associated protein 5 -0.0272859
RTN4 reticulon 4 -0.0272394
FAM162A family with sequence similarity 162, member A -0.0272182
TPX2 TPX2, microtubule-associated -0.0268764
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0264309
TXNRD1 thioredoxin reductase 1 -0.0264094
WDR45B WD repeat domain 45B -0.0261761
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0261454
RPS5 ribosomal protein S5 -0.0261262
PAICS phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase -0.0260271
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0258051
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0256584
CANX calnexin -0.0256382
NFIA nuclear factor I/A -0.0256173
GAS2L3 growth arrest-specific 2 like 3 -0.0254131
PEX5L peroxisomal biogenesis factor 5-like -0.0253267
MARCHF6 membrane associated ring-CH-type finger 6 -0.0253041
RPL35A ribosomal protein L35a -0.0251962
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0249542
DEK DEK proto-oncogene -0.0248635
MBNL2 muscleblind-like splicing regulator 2 -0.0248262
TMEM123 transmembrane protein 123 -0.0245712
MIS18BP1 MIS18 binding protein 1 -0.0239189
SSR2 signal sequence receptor, beta (translocon-associated protein beta) -0.0238134
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0237484
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0236826
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0235832
NUSAP1 nucleolar and spindle associated protein 1 -0.0235794
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0234239
HMGB2 high mobility group box 2 -0.0232981
RRBP1 ribosome binding protein 1 -0.0232515
S100A9 S100 calcium binding protein A9 -0.0232075
ANLN anillin, actin binding protein -0.0231413
NSD3 nuclear receptor binding SET domain protein 3 -0.0231089