Cysteamine (hydrochloride)_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SMAD3 SMAD family member 3 0.0802716
FNDC3B fibronectin type III domain containing 3B 0.0788017
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0766616
ANKRD28 ankyrin repeat domain 28 0.067081
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0640439
MIS18BP1 MIS18 binding protein 1 0.059562
TRIO trio Rho guanine nucleotide exchange factor 0.0595512
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0575378
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0569822
SMYD3 SET and MYND domain containing 3 0.0555079
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.055277
FMNL2 formin-like 2 0.0548219
RAD51B RAD51 paralog B 0.054414
NAV2 neuron navigator 2 0.0542714
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0540112
HSPA8 heat shock 70kDa protein 8 0.0536847
SET SET nuclear proto-oncogene 0.0533657
GOLGA4 golgin A4 0.053113
NAP1L1 nucleosome assembly protein 1-like 1 0.0517638
MSN moesin 0.0510765
MYH9 myosin, heavy chain 9, non-muscle 0.0489091
NAMPT nicotinamide phosphoribosyltransferase 0.0484145
ATP13A3 ATPase type 13A3 0.0450356
SETD5 SET domain containing 5 0.0448058
EEF2 eukaryotic translation elongation factor 2 0.0447794
HDAC9 histone deacetylase 9 0.0429208
CEP250 centrosomal protein 250kDa 0.0426336
WWTR1 WW domain containing transcription regulator 1 0.0423967
TAS2R14 taste receptor, type 2, member 14 0.0423121
YBX3 Y box binding protein 3 0.0421709
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0420261
RNF145 ring finger protein 145 0.041729
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0408895
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0404512
YAP1 Yes-associated protein 1 0.0403406
PRKCA protein kinase C, alpha 0.0398678
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0396632
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0390577
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0385291
SRRM2 serine/arginine repetitive matrix 2 0.0382605
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0381835
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0375845
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0371939
DSCAM Down syndrome cell adhesion molecule 0.0369868
KMT2C lysine (K)-specific methyltransferase 2C 0.0369859
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0369209
MED13 mediator complex subunit 13 0.0357404
DIAPH1 diaphanous-related formin 1 0.0353673
GLS2 glutaminase 2 (liver, mitochondrial) 0.0348081
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0347626
HELZ helicase with zinc finger 0.0346628
DIAPH3 diaphanous-related formin 3 0.0344403
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0339325
ZNF638 zinc finger protein 638 0.0339017
PNISR PNN-interacting serine/arginine-rich protein 0.0338375
ANXA1 annexin A1 0.0336522
RBM39 RNA binding motif protein 39 0.0333811
STK24 serine/threonine kinase 24 0.0333151
NUMA1 nuclear mitotic apparatus protein 1 0.0331528
EXOC6B exocyst complex component 6B 0.0330645
SHB Src homology 2 domain containing adaptor protein B 0.0329477
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0327158
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0324663
APLP2 amyloid beta (A4) precursor-like protein 2 0.0324479
NCOR2 nuclear receptor corepressor 2 0.0321486
WAC WW domain containing adaptor with coiled-coil 0.0315207
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.031349
RUNX1 runt-related transcription factor 1 0.0312969
FNIP1 folliculin interacting protein 1 0.0311515
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0311066
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0307468
MRE11 MRE11 homolog, double strand break repair nuclease 0.0305883
KDM4C lysine (K)-specific demethylase 4C 0.0305024
MARCHF4 membrane associated ring-CH-type finger 4 0.0304569
NAV3 neuron navigator 3 0.0302647
AFDN afadin, adherens junction formation factor 0.0302009
NSD2 nuclear receptor binding SET domain protein 2 0.030176
LOC112694756 uncharaterized LOC112694756 0.0301317
KMT2E lysine (K)-specific methyltransferase 2E 0.0299146
ZC3H12B zinc finger CCCH-type containing 12B 0.0297114
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0296539
LAMA5 laminin, alpha 5 0.0296344
HP1BP3 heterochromatin protein 1, binding protein 3 0.0294464
ITGB5 integrin, beta 5 0.0293882
NUP153 nucleoporin 153kDa 0.0287844
WWOX WW domain containing oxidoreductase 0.0284152
SEC14L1 SEC14-like 1 (S. cerevisiae) 0.0283849
MAP4 microtubule-associated protein 4 0.0280678
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0279463
YTHDF3 YTH N(6)-methyladenosine RNA binding protein 3 0.0279147
TRA2A transformer 2 alpha homolog (Drosophila) 0.0278662
SATB2 SATB homeobox 2 0.0278449
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0272333
KIF5B kinesin family member 5B 0.0271797
TOP1 topoisomerase (DNA) I 0.0269131
ERCC6L2 excision repair cross-complementation group 6-like 2 0.0269057
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.026758
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0265975
GIGYF2 GRB10 interacting GYF protein 2 0.0265888
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0264727

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.168757
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.143823
PTMA prothymosin, alpha -0.118628
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.116606
VIM vimentin -0.113575
LDHA lactate dehydrogenase A -0.0949069
TPT1 tumor protein, translationally-controlled 1 -0.0851445
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0760949
IGFBP3 insulin-like growth factor binding protein 3 -0.0656873
AHNAK AHNAK nucleoprotein -0.0652696
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0619666
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0575864
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0574107
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0558416
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0534508
TM4SF1 transmembrane 4 L six family member 1 -0.0526424
NDRG1 N-myc downstream regulated 1 -0.0525158
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0490327
S100A10 S100 calcium binding protein A10 -0.0487419
IGF2 insulin-like growth factor 2 -0.0486947
HMGA2 high mobility group AT-hook 2 -0.0482551
ZBTB20 zinc finger and BTB domain containing 20 -0.0457453
RPL31 ribosomal protein L31 -0.0454245
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0449832
GNAS GNAS complex locus -0.0446636
CANX calnexin -0.0440004
PGK1 phosphoglycerate kinase 1 -0.0436324
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0433951
RPLP1 ribosomal protein, large, P1 -0.0427016
ZMYND8 zinc finger, MYND-type containing 8 -0.04241
TPM4 tropomyosin 4 -0.0418358
PODXL podocalyxin-like -0.0390009
RAI14 retinoic acid induced 14 -0.0386289
ACTG1 actin gamma 1 -0.0364351
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0363637
GPC6 glypican 6 -0.0348682
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0341704
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0341554
BZW1 basic leucine zipper and W2 domains 1 -0.0333683
ATM ATM serine/threonine kinase -0.0329453
ARFGEF3 ARFGEF family member 3 -0.0328789
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0326271
RPL35A ribosomal protein L35a -0.0326
RRBP1 ribosome binding protein 1 -0.0316408
CLINT1 clathrin interactor 1 -0.0314935
ZBTB1 zinc finger and BTB domain containing 1 -0.0314106
ENO2 enolase 2 (gamma, neuronal) -0.030854
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 -0.0307036
SPDYA speedy/RINGO cell cycle regulator family member A -0.0303637
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0293228
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0291
EIF1 eukaryotic translation initiation factor 1 -0.0289245
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0286744
ANXA4 annexin A4 -0.0285256
SDC4 syndecan 4 -0.0283927
MYO9A myosin IXA -0.0280662
SOD2 superoxide dismutase 2, mitochondrial -0.0280561
KPNB1 karyopherin (importin) beta 1 -0.0276067
PRSS23 protease, serine, 23 -0.027568
SH3KBP1 SH3-domain kinase binding protein 1 -0.0272321
ACER3 alkaline ceramidase 3 -0.0270562
BTG1 B-cell translocation gene 1, anti-proliferative -0.0270022
SLC38A2 solute carrier family 38, member 2 -0.0265659
TMEM123 transmembrane protein 123 -0.0264789
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0263221
FAM177A1 family with sequence similarity 177, member A1 -0.0261348
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0261179
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.025919
ZBTB38 zinc finger and BTB domain containing 38 -0.0258146
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0258044
FTL ferritin, light polypeptide -0.0254086
XPOT exportin, tRNA -0.025405
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.025119
MYOF myoferlin -0.025098
CCND1 cyclin D1 -0.0249207
BASP1 brain abundant, membrane attached signal protein 1 -0.0247903
LMNA lamin A/C -0.0247467
NPR2 natriuretic peptide receptor 2 -0.0246497
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.0246212
PURA purine-rich element binding protein A -0.0245625
AHNAK2 AHNAK nucleoprotein 2 -0.0245049
RPS8 ribosomal protein S8 -0.024237
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0242103
CAVIN1 caveolae associated protein 1 -0.024209
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0241316
S100A6 S100 calcium binding protein A6 -0.0241013
RIGI RNA sensor RIG-I -0.023851
ARHGAP5 Rho GTPase activating protein 5 -0.0237458
ARMH4 armadillo like helical domain containing 4 -0.0236758
LGALS1 lectin, galactoside-binding, soluble, 1 -0.023444
PCED1B PC-esterase domain containing 1B -0.0233854
TMEM263 transmembrane protein 263 -0.022926
CD63 CD63 molecule -0.022865
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0227286
IER3 immediate early response 3 -0.022467
FBXO11 F-box protein 11 -0.0222389
COL5A1 collagen, type V, alpha 1 -0.022169
ASTN2 astrotactin 2 -0.0221474
CRBN cereblon -0.0216445
IFI16 interferon, gamma-inducible protein 16 -0.0216125