Cysteamine (hydrochloride)_SW48 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in SW48 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_SW48 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AREG amphiregulin 0.132985
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.108698
HSPA8 heat shock 70kDa protein 8 0.0845037
ATXN1 ataxin 1 0.0758867
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.075512
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0563862
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0561558
SNX9 sorting nexin 9 0.0539108
EZR ezrin 0.0498396
EEF2 eukaryotic translation elongation factor 2 0.0456578
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0432328
KMT2C lysine (K)-specific methyltransferase 2C 0.0417215
DOCK5 dedicator of cytokinesis 5 0.0416985
TSC22D2 TSC22 domain family, member 2 0.0414795
RPL3 ribosomal protein L3 0.0409911
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0390251
EGFR epidermal growth factor receptor 0.0390177
CPOX coproporphyrinogen oxidase 0.0385283
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0375757
KTN1 kinectin 1 (kinesin receptor) 0.0373453
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0365037
FHIT fragile histidine triad 0.0364996
MT2A metallothionein 2A 0.0364722
PRELID2 PRELI domain containing 2 0.0354405
ACTG1 actin gamma 1 0.0353579
EGR1 early growth response 1 0.0352653
ZNRF3 zinc and ring finger 3 0.0351733
CENPF centromere protein F, 350/400kDa 0.0341198
NAV2 neuron navigator 2 0.0337406
POTEF POTE ankyrin domain family, member F 0.0337281
EPHA2 EPH receptor A2 0.0328717
GPHN gephyrin 0.03286
SLTM SAFB-like, transcription modulator 0.0326249
ANKRD12 ankyrin repeat domain 12 0.0325614
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0323809
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0323553
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0321304
CCSER1 coiled-coil serine-rich protein 1 0.032062
FHL2 four and a half LIM domains 2 0.0311812
FAT1 FAT atypical cadherin 1 0.0309678
YAP1 Yes-associated protein 1 0.030924
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0305341
VMP1 vacuole membrane protein 1 0.0303877
BRD2 bromodomain containing 2 0.0302693
EEF1G eukaryotic translation elongation factor 1 gamma 0.0302513
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0300648
ACTN4 actinin, alpha 4 0.0296879
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0295589
DSCAM Down syndrome cell adhesion molecule 0.0288698
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.028666
PTPRG protein tyrosine phosphatase, receptor type, G 0.0284972
FLNA filamin A, alpha 0.0284362
APLP2 amyloid beta (A4) precursor-like protein 2 0.0283455
MYH9 myosin, heavy chain 9, non-muscle 0.0278313
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0275997
UBA6 ubiquitin-like modifier activating enzyme 6 0.0274599
MIDEAS mitotic deacetylase associated SANT domain protein 0.0272661
KDM6B lysine (K)-specific demethylase 6B 0.0270001
USP6NL USP6 N-terminal like 0.0269864
PARD3 par-3 family cell polarity regulator 0.0268804
RNF43 ring finger protein 43 0.0268379
RPL37A ribosomal protein L37a 0.0268211
BIRC3 baculoviral IAP repeat containing 3 0.0265908
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0265383
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0264264
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0255086
RPLP2 ribosomal protein, large, P2 0.0253718
SLMAP sarcolemma associated protein 0.0250838
ZNF292 zinc finger protein 292 0.0249692
SAMD4A sterile alpha motif domain containing 4A 0.0249305
MBNL1 muscleblind-like splicing regulator 1 0.024927
GCLC glutamate-cysteine ligase, catalytic subunit 0.0248029
BBX bobby sox homolog (Drosophila) 0.0247287
TXNIP thioredoxin interacting protein 0.0245998
SEPTIN9 septin 9 0.0245833
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0242236
ARL15 ADP-ribosylation factor-like 15 0.0241594
PCBP2 poly(rC) binding protein 2 0.0241399
RPS19 ribosomal protein S19 0.0241393
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0240997
SDC4 syndecan 4 0.0240443
RPS2 ribosomal protein S2 0.0239754
SH3RF2 SH3 domain containing ring finger 2 0.0239532
KDM6A lysine (K)-specific demethylase 6A 0.0235392
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0235144
MAN1A1 mannosidase, alpha, class 1A, member 1 0.02346
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0232787
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0231688
PLAUR plasminogen activator, urokinase receptor 0.0230673
HILPDA hypoxia inducible lipid droplet-associated 0.0228404
ZFAND3 zinc finger, AN1-type domain 3 0.0225984
SPRED2 sprouty-related, EVH1 domain containing 2 0.0222228
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0221796
ITGA6 integrin, alpha 6 0.0221751
ASPH aspartate beta-hydroxylase 0.0220953
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0220392
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0219714
EIF4A1 eukaryotic translation initiation factor 4A1 0.0218738
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0218199
PKP4 plakophilin 4 0.0218056

decreased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.336325
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.247987
PTMA prothymosin, alpha -0.168281
IER3 immediate early response 3 -0.101115
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0742191
HDAC2 histone deacetylase 2 -0.0718131
RPS24 ribosomal protein S24 -0.0689266
FERMT1 fermitin family member 1 -0.0622011
LAMB3 laminin, beta 3 -0.0610777
LMO7 LIM domain 7 -0.0609443
KLF5 Kruppel-like factor 5 (intestinal) -0.06079
SERINC5 serine incorporator 5 -0.0585418
IGFBP3 insulin-like growth factor binding protein 3 -0.0550273
CANX calnexin -0.0461435
KRT18 keratin 18, type I -0.044545
VCL vinculin -0.0445096
FRAS1 Fraser extracellular matrix complex subunit 1 -0.0433681
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0403503
RPL35A ribosomal protein L35a -0.0399813
RPL4 ribosomal protein L4 -0.0369118
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0351324
KLF3 Kruppel-like factor 3 (basic) -0.0344786
MTAP methylthioadenosine phosphorylase -0.0342867
FLOT1 flotillin 1 -0.0338329
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.032862
TMEM123 transmembrane protein 123 -0.0319605
LDHA lactate dehydrogenase A -0.0316675
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0309144
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.030526
RSL1D1 ribosomal L1 domain containing 1 -0.0303941
PERP PERP, TP53 apoptosis effector -0.0297306
RPL34 ribosomal protein L34 -0.0285336
LAMA4 laminin, alpha 4 -0.0284774
DSPP dentin sialophosphoprotein -0.0282475
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0273607
CCND1 cyclin D1 -0.0273264
TMSB10 thymosin beta 10 -0.0272624
GDF15 growth differentiation factor 15 -0.0259712
FMN1 formin 1 -0.025763
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0253527
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0243094
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0238593
ZBTB7C zinc finger and BTB domain containing 7C -0.0235195
RPL23 ribosomal protein L23 -0.0234235
RCOR1 REST corepressor 1 -0.0229787
RAB10 RAB10, member RAS oncogene family -0.0228371
OXSR1 oxidative stress responsive 1 -0.0228342
IARS1 isoleucyl-tRNA synthetase 1 -0.0228324
TPT1 tumor protein, translationally-controlled 1 -0.022549
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.022393
OSBPL3 oxysterol binding protein-like 3 -0.0222364
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 -0.0219977
TOP1 topoisomerase (DNA) I -0.0218278
EPCAM epithelial cell adhesion molecule -0.0214239
S100A6 S100 calcium binding protein A6 -0.0213579
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0212937
LMAN1 lectin, mannose-binding, 1 -0.0210848
RPL6 ribosomal protein L6 -0.0204673
ILF3 interleukin enhancer binding factor 3, 90kDa -0.0203608
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0203448
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0201674
GPC5 glypican 5 -0.0199094
RPL7 ribosomal protein L7 -0.0194243
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0191185
TKT transketolase -0.0190647
CDK13 cyclin-dependent kinase 13 -0.0188738
DSC3 desmocollin 3 -0.01886
RPL12 ribosomal protein L12 -0.0186868
ITPKC inositol-trisphosphate 3-kinase C -0.0185145
AOPEP aminopeptidase O (putative) -0.0183102
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0182513
TUBB tubulin, beta class I -0.0180142
CALR calreticulin -0.0177256
RPS25 ribosomal protein S25 -0.0177146
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like -0.0176305
RPS27A ribosomal protein S27a -0.0173248
COPB1 coatomer protein complex, subunit beta 1 -0.0166554
KDM3A lysine (K)-specific demethylase 3A -0.0164841
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0162224
OXR1 oxidation resistance 1 -0.0160957
NPR2 natriuretic peptide receptor 2 -0.0160774
NEMF nuclear export mediator factor -0.0160073
HM13 histocompatibility (minor) 13 -0.0159754
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0156886
COMMD10 COMM domain containing 10 -0.0155251
FAM3C family with sequence similarity 3, member C -0.0154742
GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 -0.0153529
MARS1 methionyl-tRNA synthetase 1 -0.0152954
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0152175
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0151425
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0150604
ESYT2 extended synaptotagmin-like protein 2 -0.0150572
EIF2S1 eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa -0.0150155
DSG2 desmoglein 2 -0.014976
TRAM1 translocation associated membrane protein 1 -0.0149278
MDH2 malate dehydrogenase 2, NAD (mitochondrial) -0.0149184
RACK1 receptor for activated C kinase 1 -0.0148859
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.014878
RPLP0 ribosomal protein, large, P0 -0.0147935
PDIA4 protein disulfide isomerase family A, member 4 -0.0147404