Cysteamine (hydrochloride)_SW480 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cysteamine (hydrochloride) perturbation in SW480 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cysteamine (hydrochloride)_SW480 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.140056
SYT1 synaptotagmin I 0.113291
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.111347
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0916047
RPS6 ribosomal protein S6 0.0823073
TNS3 tensin 3 0.078761
ATXN1 ataxin 1 0.0754027
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0723316
EGR1 early growth response 1 0.0714021
MT2A metallothionein 2A 0.0666478
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0645018
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0610838
WWOX WW domain containing oxidoreductase 0.0604661
NKD1 naked cuticle homolog 1 (Drosophila) 0.0604357
EZR ezrin 0.0602022
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0581354
YAP1 Yes-associated protein 1 0.0538724
RPL35A ribosomal protein L35a 0.0527676
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0518497
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0513174
BCL2L1 BCL2-like 1 0.0512567
HSPA8 heat shock 70kDa protein 8 0.0491856
LMO7 LIM domain 7 0.048207
SMAD3 SMAD family member 3 0.0474724
TRIO trio Rho guanine nucleotide exchange factor 0.0473254
RPS19 ribosomal protein S19 0.0467541
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0450651
SVIL supervillin 0.044477
POTEF POTE ankyrin domain family, member F 0.0440818
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0431343
WNK1 WNK lysine deficient protein kinase 1 0.0430229
DOCK5 dedicator of cytokinesis 5 0.0414912
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0407626
TRA2B transformer 2 beta homolog (Drosophila) 0.040484
CENPF centromere protein F, 350/400kDa 0.0397571
RUNX1 runt-related transcription factor 1 0.0395291
LOC102724023 ES1 protein homolog, mitochondrial 0.0395152
AKAP13 A kinase (PRKA) anchor protein 13 0.03946
CD46 CD46 molecule, complement regulatory protein 0.0390704
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0387283
RPL11 ribosomal protein L11 0.038319
JMJD1C jumonji domain containing 1C 0.0382496
MSN moesin 0.0381562
PCM1 pericentriolar material 1 0.0372194
SPRED2 sprouty-related, EVH1 domain containing 2 0.0371462
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0360664
CYB5B cytochrome b5 type B (outer mitochondrial membrane) 0.0360184
MSI2 musashi RNA-binding protein 2 0.0354889
SAMD4A sterile alpha motif domain containing 4A 0.0352079
FYN FYN proto-oncogene, Src family tyrosine kinase 0.0350046
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0346643
CEMIP2 cell migration inducing hyaluronidase 2 0.0340755
RNF43 ring finger protein 43 0.0339103
ZNRF3 zinc and ring finger 3 0.0336146
DOCK4 dedicator of cytokinesis 4 0.033564
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 0.0335507
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0333428
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like 0.0323169
VMP1 vacuole membrane protein 1 0.0322739
SHB Src homology 2 domain containing adaptor protein B 0.0322454
MKI67 marker of proliferation Ki-67 0.0313364
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0309408
TJP1 tight junction protein 1 0.0308469
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0307955
RPL27 ribosomal protein L27 0.0307753
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0307161
KTN1 kinectin 1 (kinesin receptor) 0.0306757
ARL15 ADP-ribosylation factor-like 15 0.0306415
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0305119
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0304774
TTC3 tetratricopeptide repeat domain 3 0.0302642
COBL cordon-bleu WH2 repeat protein 0.0301595
TNS4 tensin 4 0.0297787
LENG8 leukocyte receptor cluster (LRC) member 8 0.0296797
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0295886
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0291614
RPL19 ribosomal protein L19 0.029108
ANKRD17 ankyrin repeat domain 17 0.0288294
FOSL1 FOS-like antigen 1 0.0287413
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0284225
BMP5 bone morphogenetic protein 5 0.0283383
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0282113
ARGLU1 arginine and glutamate rich 1 0.0279831
GPHN gephyrin 0.0275784
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0271878
PDLIM5 PDZ and LIM domain 5 0.0271404
FRMD5 FERM domain containing 5 0.0271062
RPL21 ribosomal protein L21 0.0270001
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0268499
MYO10 myosin X 0.0268417
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0268188
EFNB2 ephrin-B2 0.0267292
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0266644
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0265603
GPBP1 GC-rich promoter binding protein 1 0.0264678
NEBL nebulette 0.0264409
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.026406
MAST4 microtubule associated serine/threonine kinase family member 4 0.0263528
PRKCA protein kinase C, alpha 0.0262444
SLTM SAFB-like, transcription modulator 0.0261462

decreased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.13468
AHNAK AHNAK nucleoprotein -0.12711
RPS27A ribosomal protein S27a -0.113208
SDK1 sidekick cell adhesion molecule 1 -0.112632
PTMA prothymosin, alpha -0.112394
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.109546
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.100366
CCND1 cyclin D1 -0.0985306
UBC ubiquitin C -0.0964892
CDH13 cadherin 13 -0.0957544
CANX calnexin -0.0946364
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.0909002
KRT18 keratin 18, type I -0.0873187
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0817108
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0816211
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0810687
ENO1 enolase 1, (alpha) -0.0770679
ANO1 anoctamin 1, calcium activated chloride channel -0.0735467
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0732845
TPT1 tumor protein, translationally-controlled 1 -0.0690971
RPS24 ribosomal protein S24 -0.0642017
LDHA lactate dehydrogenase A -0.0585471
KRT8 keratin 8, type II -0.0512735
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0505499
SPDYA speedy/RINGO cell cycle regulator family member A -0.0499122
INTS6 integrator complex subunit 6 -0.0467812
MRPS6 mitochondrial ribosomal protein S6 -0.0438897
EPCAM epithelial cell adhesion molecule -0.0419986
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0410666
PDGFA platelet-derived growth factor alpha polypeptide -0.0393306
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0382191
PDE4D phosphodiesterase 4D, cAMP-specific -0.0374969
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0369291
TMSB4X thymosin beta 4, X-linked -0.0364581
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0358525
KDM3A lysine (K)-specific demethylase 3A -0.0354178
ADGRL2 adhesion G protein-coupled receptor L2 -0.0342845
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0340114
CALR calreticulin -0.0338344
VIM vimentin -0.0331044
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0329878
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0328584
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0328342
PERP PERP, TP53 apoptosis effector -0.032452
ZMYND8 zinc finger, MYND-type containing 8 -0.0319926
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0310071
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0309153
GLG1 golgi glycoprotein 1 -0.0307809
MARCHF6 membrane associated ring-CH-type finger 6 -0.0302655
TMSB10 thymosin beta 10 -0.0302092
ITGB4 integrin, beta 4 -0.0296534
RSL1D1 ribosomal L1 domain containing 1 -0.0292896
PKM pyruvate kinase, muscle -0.0289186
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0288207
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0286682
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0284329
FLNB filamin B, beta -0.0282029
TFRC transferrin receptor -0.0279314
NAP1L1 nucleosome assembly protein 1-like 1 -0.0275211
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0272122
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.027094
RPL23 ribosomal protein L23 -0.0270161
ATM ATM serine/threonine kinase -0.0269319
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0265494
KLF5 Kruppel-like factor 5 (intestinal) -0.0263702
BACE2 beta-site APP-cleaving enzyme 2 -0.0261453
AEBP2 AE binding protein 2 -0.0261223
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.026055
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0258971
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0256902
SENP5 SUMO1/sentrin specific peptidase 5 -0.0250903
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0239923
TAS2R14 taste receptor, type 2, member 14 -0.0239737
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0239124
PDIA4 protein disulfide isomerase family A, member 4 -0.0238523
KRT5 keratin 5, type II -0.0238486
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0237873
TMEM123 transmembrane protein 123 -0.0235605
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0235354
RPL4 ribosomal protein L4 -0.0230996
OGA O-GlcNAcase -0.0230935
IER3 immediate early response 3 -0.0230385
TNRC6B trinucleotide repeat containing 6B -0.0228623
TPM4 tropomyosin 4 -0.0227538
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.02222
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0222095
BIRC6 baculoviral IAP repeat containing 6 -0.021895
ABLIM1 actin binding LIM protein 1 -0.0216672
ANLN anillin, actin binding protein -0.0214245
SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 -0.0214104
KHSRP KH-type splicing regulatory protein -0.0211891
GTF2IRD1 GTF2I repeat domain containing 1 -0.02115
SEC31A SEC31 homolog A (S. cerevisiae) -0.0209424
PDIA3 protein disulfide isomerase family A, member 3 -0.0208212
SUN1 Sad1 and UNC84 domain containing 1 -0.0207749
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0206074
CHD4 chromodomain helicase DNA binding protein 4 -0.0201132
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta -0.0200407
SET SET nuclear proto-oncogene -0.0199541
CBX5 chromobox homolog 5 -0.0199394