Cytarabine (hydrochloride)_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine (hydrochloride) perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine (hydrochloride)_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0717318
NHSL1 NHS-like 1 0.0476885
PCBP2 poly(rC) binding protein 2 0.0469225
CCNL1 cyclin L1 0.045707
RRM2 ribonucleotide reductase M2 0.043252
TPM3 tropomyosin 3 0.0427496
HELLS helicase, lymphoid-specific 0.0411851
ASPH aspartate beta-hydroxylase 0.0409161
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0395493
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa 0.0383024
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0382093
PDE4D phosphodiesterase 4D, cAMP-specific 0.0355575
NECTIN3 nectin cell adhesion molecule 3 0.0326477
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0291414
DIAPH3 diaphanous-related formin 3 0.0290671
RTN4 reticulon 4 0.0286137
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0285401
KDM6A lysine (K)-specific demethylase 6A 0.0282094
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0279
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0270048
CDH12 cadherin 12, type 2 (N-cadherin 2) 0.0267914
PUM2 pumilio RNA-binding family member 2 0.0265939
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0263831
MEMO1 mediator of cell motility 1 0.0258427
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0258274
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0251192
YAP1 Yes-associated protein 1 0.024337
SDK1 sidekick cell adhesion molecule 1 0.0239726
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0239551
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0238877
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0236947
WDR43 WD repeat domain 43 0.0232844
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0232479
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0228265
NCAPG2 non-SMC condensin II complex, subunit G2 0.0227327
RAB7A RAB7A, member RAS oncogene family 0.0224319
HSPA4 heat shock 70kDa protein 4 0.0222954
CLDND1 claudin domain containing 1 0.0221393
GPHN gephyrin 0.0221374
MYH9 myosin, heavy chain 9, non-muscle 0.0221033
UBA6 ubiquitin-like modifier activating enzyme 6 0.0220799
ADAM17 ADAM metallopeptidase domain 17 0.0219948
INTS6 integrator complex subunit 6 0.0216937
GASK1B golgi associated kinase 1B 0.0216564
RPS12 ribosomal protein S12 0.0214376
DENND5A DENN/MADD domain containing 5A 0.0214027
TFG TRK-fused gene 0.0213836
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0212257
APLP2 amyloid beta (A4) precursor-like protein 2 0.0212031
FNDC3B fibronectin type III domain containing 3B 0.0209113
ARRDC3 arrestin domain containing 3 0.020558
JMJD1C jumonji domain containing 1C 0.0205066
RCOR1 REST corepressor 1 0.0204616
VCL vinculin 0.0202408
GSK3B glycogen synthase kinase 3 beta 0.0199352
NUP58 nucleoporin 58 0.0196629
RBM33 RNA binding motif protein 33 0.0196131
LPP LIM domain containing preferred translocation partner in lipoma 0.019533
PCDH9 protocadherin 9 0.0192581
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0192371
UHMK1 U2AF homology motif (UHM) kinase 1 0.0192288
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0189517
NBAS neuroblastoma amplified sequence 0.0189337
ACTG1 actin gamma 1 0.0186571
CEP95 centrosomal protein 95kDa 0.0185293
RPL37A ribosomal protein L37a 0.0183073
RAD51B RAD51 paralog B 0.0181427
NEGR1 neuronal growth regulator 1 0.0180592
PCM1 pericentriolar material 1 0.0178863
ETNK1 ethanolamine kinase 1 0.0178353
CAND1 cullin-associated and neddylation-dissociated 1 0.0178205
ATP13A3 ATPase type 13A3 0.0177955
E2F7 E2F transcription factor 7 0.0173575
MCL1 myeloid cell leukemia 1 0.0171555
CAMK4 calcium/calmodulin-dependent protein kinase IV 0.0171273
CPOX coproporphyrinogen oxidase 0.0168784
MSH6 mutS homolog 6 0.0167332
ASCC3 activating signal cointegrator 1 complex subunit 3 0.016668
MEF2A myocyte enhancer factor 2A 0.016662
WWTR1 WW domain containing transcription regulator 1 0.016661
NPC1 Niemann-Pick disease, type C1 0.0165333
ALMS1 Alstrom syndrome protein 1 0.0164881
RPL3 ribosomal protein L3 0.0164829
MYO19 myosin XIX 0.016463
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0163296
EIF4B eukaryotic translation initiation factor 4B 0.0160952
HHAT hedgehog acyltransferase 0.0160934
LRMDA leucine rich melanocyte differentiation associated 0.0160292
POTEF POTE ankyrin domain family, member F 0.0160007
RNF13 ring finger protein 13 0.0159943
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0159662
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0158779
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) 0.0158742
KCMF1 potassium channel modulatory factor 1 0.0158317
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0158196
ANKUB1 ankyrin repeat and ubiquitin domain containing 1 0.0157791
WDHD1 WD repeat and HMG-box DNA binding protein 1 0.015742
BABAM2 BRISC and BRCA1 A complex member 2 0.0156845
FAM111B family with sequence similarity 111, member B 0.0156387
MSH2 mutS homolog 2 0.0155123

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.325165
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.166887
NLGN1 neuroligin 1 -0.163587
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.158953
AREG amphiregulin -0.154945
TMSB10 thymosin beta 10 -0.134005
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.109919
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.104781
MYL12B myosin, light chain 12B, regulatory -0.0873763
PCDH7 protocadherin 7 -0.0769589
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0758939
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0712254
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0698232
SLC38A2 solute carrier family 38, member 2 -0.0696504
ANXA1 annexin A1 -0.0662235
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0642922
H1-0 H1.0 linker histone -0.0632432
CCND1 cyclin D1 -0.0631012
ZBTB20 zinc finger and BTB domain containing 20 -0.0622969
BIRC3 baculoviral IAP repeat containing 3 -0.0615427
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0513661
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0498709
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0491055
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0489302
AHNAK AHNAK nucleoprotein -0.0484988
CELF2 CUGBP, Elav-like family member 2 -0.0471145
RPLP1 ribosomal protein, large, P1 -0.0469496
EDN1 endothelin 1 -0.0462516
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0457128
TPI1 triosephosphate isomerase 1 -0.0454172
FTL ferritin, light polypeptide -0.0449038
YBX3 Y box binding protein 3 -0.0443313
SLC38A1 solute carrier family 38, member 1 -0.0438983
NAP1L1 nucleosome assembly protein 1-like 1 -0.0425024
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0422609
DLC1 DLC1 Rho GTPase activating protein -0.0405581
CLDN1 claudin 1 -0.0405425
KLF6 Kruppel-like factor 6 -0.040041
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0381091
KIF5B kinesin family member 5B -0.0377265
CNRIP1 cannabinoid receptor interacting protein 1 -0.0371799
HSPB1 heat shock 27kDa protein 1 -0.0370221
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0369172
CENPF centromere protein F, 350/400kDa -0.0361262
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0355037
EIF1 eukaryotic translation initiation factor 1 -0.0353179
RPL8 ribosomal protein L8 -0.0347635
RACK1 receptor for activated C kinase 1 -0.0347227
NIPBL Nipped-B homolog (Drosophila) -0.0346883
PFN1 profilin 1 -0.0331226
RPS24 ribosomal protein S24 -0.0320046
CDK6 cyclin-dependent kinase 6 -0.0317048
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0314335
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0311004
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0309743
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0309533
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0298003
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0297947
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0295166
CENPE centromere protein E, 312kDa -0.0291693
PRRC2C proline-rich coiled-coil 2C -0.0286894
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0283436
GARS1 glycyl-tRNA synthetase 1 -0.0282055
TUBB tubulin, beta class I -0.0281873
CXADR coxsackie virus and adenovirus receptor -0.0280081
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0278728
NPR2 natriuretic peptide receptor 2 -0.0274557
RPL12 ribosomal protein L12 -0.0271031
ATP11A ATPase, class VI, type 11A -0.0270896
MKI67 marker of proliferation Ki-67 -0.0270624
CCDC88A coiled-coil domain containing 88A -0.0270596
CAVIN1 caveolae associated protein 1 -0.0265864
RSL1D1 ribosomal L1 domain containing 1 -0.0264357
GJA1 gap junction protein, alpha 1, 43kDa -0.0260428
SEC62 SEC62 homolog (S. cerevisiae) -0.0254408
LOC112694756 uncharaterized LOC112694756 -0.0253495
GCG glucagon -0.0253101
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0252312
RPS19 ribosomal protein S19 -0.0251438
TPT1 tumor protein, translationally-controlled 1 -0.0251219
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0247156
MPG N-methylpurine-DNA glycosylase -0.0244786
MMP12 matrix metallopeptidase 12 -0.0241682
RPL36 ribosomal protein L36 -0.0241493
PEG10 paternally expressed 10 -0.024103
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0240449
RAD21 RAD21 homolog (S. pombe) -0.0239445
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0239243
RPL32 ribosomal protein L32 -0.0235306
CBX3 chromobox homolog 3 -0.0231342
RPLP0 ribosomal protein, large, P0 -0.0231061
OSBPL8 oxysterol binding protein-like 8 -0.0230138
RPLP2 ribosomal protein, large, P2 -0.0229557
TMEM123 transmembrane protein 123 -0.0226017
LMO7 LIM domain 7 -0.0223548
KPNB1 karyopherin (importin) beta 1 -0.0222605
PGK1 phosphoglycerate kinase 1 -0.0221882
IFIH1 interferon induced with helicase C domain 1 -0.0221622
CCNI cyclin I -0.0220932
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0215904