Cytarabine (hydrochloride)_AN3 CA Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine (hydrochloride) perturbation in AN3 CA cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine (hydrochloride)_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.121619
PABPC1 poly(A) binding protein, cytoplasmic 1 0.110807
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.100895
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0982708
ZNF292 zinc finger protein 292 0.0942161
OGA O-GlcNAcase 0.0736156
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0734969
USP9X ubiquitin specific peptidase 9, X-linked 0.0651369
CALR calreticulin 0.0645222
SUCO SUN domain containing ossification factor 0.060968
TMSB4X thymosin beta 4, X-linked 0.0597472
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.057991
CANX calnexin 0.057888
PCBP2 poly(rC) binding protein 2 0.0558621
ITGAV integrin, alpha V 0.0551869
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0535872
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 0.051889
SET SET nuclear proto-oncogene 0.0514263
GSE1 Gse1 coiled-coil protein 0.0506143
COL1A2 collagen, type I, alpha 2 0.0495994
PELI1 pellino E3 ubiquitin protein ligase 1 0.049525
GOLGA4 golgin A4 0.0489625
UBA6 ubiquitin-like modifier activating enzyme 6 0.0487057
B2M beta-2-microglobulin 0.0482854
HELLS helicase, lymphoid-specific 0.0478768
EEF2 eukaryotic translation elongation factor 2 0.0476243
CSDE1 cold shock domain containing E1, RNA-binding 0.0463242
QKI QKI, KH domain containing, RNA binding 0.0456974
MED13L mediator complex subunit 13-like 0.0454413
TRIP12 thyroid hormone receptor interactor 12 0.0450546
ENO1 enolase 1, (alpha) 0.0449007
MED14 mediator complex subunit 14 0.0445488
UTRN utrophin 0.0443455
AKAP9 A kinase (PRKA) anchor protein 9 0.0439028
FCHSD2 FCH and double SH3 domains 2 0.043403
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0433468
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0420739
VCL vinculin 0.0414976
KPNB1 karyopherin (importin) beta 1 0.0413612
MATR3 matrin 3 0.0410035
CCNL1 cyclin L1 0.0409064
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0407422
PRRC2C proline-rich coiled-coil 2C 0.04051
RNF145 ring finger protein 145 0.0401493
PDIA6 protein disulfide isomerase family A, member 6 0.039871
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0398638
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0397949
FKBP5 FK506 binding protein 5 0.0396066
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0395228
TM9SF3 transmembrane 9 superfamily member 3 0.0389758
ZFAND3 zinc finger, AN1-type domain 3 0.0386424
RAD51B RAD51 paralog B 0.0385003
AKR1C2 aldo-keto reductase family 1, member C2 0.0381252
PNISR PNN-interacting serine/arginine-rich protein 0.0371965
RLF rearranged L-myc fusion 0.0368103
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0366915
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.035991
KMT2A lysine (K)-specific methyltransferase 2A 0.035504
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) 0.0346278
FER fer (fps/fes related) tyrosine kinase 0.0343099
SMC1A structural maintenance of chromosomes 1A 0.0338447
FNDC3B fibronectin type III domain containing 3B 0.0337857
TPM3 tropomyosin 3 0.0335872
MEST mesoderm specific transcript 0.0335831
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0334833
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0333731
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0331328
PDIA3 protein disulfide isomerase family A, member 3 0.0329691
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0328662
ANKRD17 ankyrin repeat domain 17 0.0327938
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0326858
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0321562
USP3 ubiquitin specific peptidase 3 0.0321036
SRSF11 serine/arginine-rich splicing factor 11 0.0319073
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0318207
FXR1 fragile X mental retardation, autosomal homolog 1 0.0315574
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0314965
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.031437
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0312815
KAZN kazrin, periplakin interacting protein 0.0311106
SEPTIN7 septin 7 0.0310483
MACF1 microtubule-actin crosslinking factor 1 0.0310148
ETNK1 ethanolamine kinase 1 0.0310061
SOX6 SRY (sex determining region Y)-box 6 0.0308419
CAMTA1 calmodulin binding transcription activator 1 0.0308284
KLHDC10 kelch domain containing 10 0.030793
SPAG9 sperm associated antigen 9 0.0306706
RPS4X ribosomal protein S4, X-linked 0.030669
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0306271
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0306057
YBX1 Y box binding protein 1 0.0304814
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0304657
BCAS3 breast carcinoma amplified sequence 3 0.0304419
FANCI Fanconi anemia, complementation group I 0.0303921
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 0.0303619
SFTPA2 surfactant protein A2 0.0301144
APP amyloid beta (A4) precursor protein 0.0300496
TOP2B topoisomerase (DNA) II beta 180kDa 0.0299707
SYAP1 synapse associated protein 1 0.0299218
TBK1 TANK-binding kinase 1 0.0298152

decreased expression

Symbol Name Standardized Value
CADM2 cell adhesion molecule 2 -0.226615
PRKG1 protein kinase, cGMP-dependent, type I -0.215201
VIM vimentin -0.214867
HMGA2 high mobility group AT-hook 2 -0.163771
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.120065
PEG10 paternally expressed 10 -0.0973442
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.093051
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.081136
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0756177
TRIO trio Rho guanine nucleotide exchange factor -0.0735955
SLC38A2 solute carrier family 38, member 2 -0.0702991
CTBP2 C-terminal binding protein 2 -0.056954
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0567055
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0473075
TMSB10 thymosin beta 10 -0.0469912
RPS24 ribosomal protein S24 -0.0465454
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0460663
MYOF myoferlin -0.045845
SLC6A8 solute carrier family 6 (neurotransmitter transporter), member 8 -0.0424157
ZFHX3 zinc finger homeobox 3 -0.0400581
ZMIZ1 zinc finger, MIZ-type containing 1 -0.038226
FLNB filamin B, beta -0.0381545
RPS23 ribosomal protein S23 -0.0375138
CENPE centromere protein E, 312kDa -0.037155
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0359141
CENPF centromere protein F, 350/400kDa -0.035535
THSD4 thrombospondin, type I, domain containing 4 -0.0354719
INTS6 integrator complex subunit 6 -0.0352095
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0351282
MSRB3 methionine sulfoxide reductase B3 -0.0350116
HMGA1 high mobility group AT-hook 1 -0.0342279
TPK1 thiamin pyrophosphokinase 1 -0.0335158
TTC28 tetratricopeptide repeat domain 28 -0.0316956
WSB1 WD repeat and SOCS box containing 1 -0.0314794
TRIM9 tripartite motif containing 9 -0.0309754
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0309502
FBXO11 F-box protein 11 -0.03007
RPL31 ribosomal protein L31 -0.0293002
RPL37A ribosomal protein L37a -0.0291733
STXBP5 syntaxin binding protein 5 (tomosyn) -0.029162
IGF2R insulin-like growth factor 2 receptor -0.0280874
PRLR prolactin receptor -0.0278973
ANO6 anoctamin 6 -0.0277832
GTF2IRD1 GTF2I repeat domain containing 1 -0.0277717
NBEA neurobeachin -0.0277195
DENND1A DENN/MADD domain containing 1A -0.0276955
COMMD10 COMM domain containing 10 -0.0272556
FOXP1 forkhead box P1 -0.0270169
KDM5B lysine (K)-specific demethylase 5B -0.0267637
RPL28 ribosomal protein L28 -0.0266883
PDE4D phosphodiesterase 4D, cAMP-specific -0.0266596
CREBBP CREB binding protein -0.0264237
MEIS2 Meis homeobox 2 -0.0263503
MAML3 mastermind-like 3 (Drosophila) -0.026109
SOX4 SRY (sex determining region Y)-box 4 -0.0259055
CUX1 cut-like homeobox 1 -0.0258958
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0256797
TCF12 transcription factor 12 -0.0251182
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -0.02487
KDM4B lysine (K)-specific demethylase 4B -0.0248183
IER3 immediate early response 3 -0.0244608
PDE10A phosphodiesterase 10A -0.0244328
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0243895
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0240248
FBXL2 F-box and leucine-rich repeat protein 2 -0.0236678
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0236354
EGFR epidermal growth factor receptor -0.0233985
MTUS1 microtubule associated tumor suppressor 1 -0.0233312
RPS29 ribosomal protein S29 -0.0227062
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 -0.0225198
TSC22D1 TSC22 domain family, member 1 -0.0222395
TULP4 tubby like protein 4 -0.0221306
ATN1 atrophin 1 -0.0221001
EGR1 early growth response 1 -0.0220587
FBXL7 F-box and leucine-rich repeat protein 7 -0.0220525
SENP6 SUMO1/sentrin specific peptidase 6 -0.0217496
TFRC transferrin receptor -0.0215732
RAB7A RAB7A, member RAS oncogene family -0.0215507
NPR2 natriuretic peptide receptor 2 -0.021434
FLNA filamin A, alpha -0.0210773
RPL34 ribosomal protein L34 -0.0210007
LDLRAD3 low density lipoprotein receptor class A domain containing 3 -0.0207408
RPS27A ribosomal protein S27a -0.0206488
BTBD7 BTB (POZ) domain containing 7 -0.0205323
MTDH metadherin -0.0203369
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0202831
AKAP12 A kinase (PRKA) anchor protein 12 -0.0200878
NRF1 nuclear respiratory factor 1 -0.0199876
CREM cAMP responsive element modulator -0.0199039
DEPDC1B DEP domain containing 1B -0.019822
MMP16 matrix metallopeptidase 16 (membrane-inserted) -0.0198065
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0197492
PDK4 pyruvate dehydrogenase kinase, isozyme 4 -0.0196533
RAI1 retinoic acid induced 1 -0.0196191
LARP4B La ribonucleoprotein domain family, member 4B -0.0195353
FAM193A family with sequence similarity 193, member A -0.019496
PSD3 pleckstrin and Sec7 domain containing 3 -0.0192795
LRRC23 leucine rich repeat containing 23 -0.0192571
GAS2L3 growth arrest-specific 2 like 3 -0.0192463
RCOR1 REST corepressor 1 -0.0191625