Cytarabine (hydrochloride)_BT-474 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine (hydrochloride) perturbation in BT-474 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine (hydrochloride)_BT-474 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.140536
PTMA prothymosin, alpha 0.120579
IGFBP5 insulin-like growth factor binding protein 5 0.107743
VMP1 vacuole membrane protein 1 0.103776
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0950686
ERBB2 erb-b2 receptor tyrosine kinase 2 0.0933407
ACSS2 acyl-CoA synthetase short-chain family member 2 0.0905448
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0860247
ELOVL5 ELOVL fatty acid elongase 5 0.0774353
ITCH itchy E3 ubiquitin protein ligase 0.0717184
SDC4 syndecan 4 0.0711349
NCOA3 nuclear receptor coactivator 3 0.0684314
TPM3 tropomyosin 3 0.0675263
MACF1 microtubule-actin crosslinking factor 1 0.0644299
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein 0.0638631
SET SET nuclear proto-oncogene 0.0610426
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0583499
MYH9 myosin, heavy chain 9, non-muscle 0.0560016
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0552708
DSPP dentin sialophosphoprotein 0.0526486
ACSL3 acyl-CoA synthetase long-chain family member 3 0.051051
CCNL1 cyclin L1 0.0470589
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0448355
ENAH enabled homolog (Drosophila) 0.0443743
KIAA1217 KIAA1217 0.044158
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0436774
KAZN kazrin, periplakin interacting protein 0.0431803
HSPA8 heat shock 70kDa protein 8 0.0429326
PBX1 pre-B-cell leukemia homeobox 1 0.0427842
SHROOM3 shroom family member 3 0.0424728
KRT8 keratin 8, type II 0.0424215
MSMO1 methylsterol monooxygenase 1 0.0422137
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0406528
ALCAM activated leukocyte cell adhesion molecule 0.039905
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0394127
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0392058
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0383887
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit 0.0383109
PDLIM5 PDZ and LIM domain 5 0.03765
RAB6A RAB6A, member RAS oncogene family 0.037477
TMSB4X thymosin beta 4, X-linked 0.0363663
DUSP16 dual specificity phosphatase 16 0.0360005
ATAD2 ATPase family, AAA domain containing 2 0.0356083
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0351735
BZW1 basic leucine zipper and W2 domains 1 0.0344269
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0338452
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0332021
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0331305
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.0326496
MYO6 myosin VI 0.0321538
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.0315962
MYO10 myosin X 0.0314049
PRLR prolactin receptor 0.0313588
AHNAK AHNAK nucleoprotein 0.0311588
RPS3 ribosomal protein S3 0.0311389
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.0310907
ZC3H11A zinc finger CCCH-type containing 11A 0.030977
UBA6 ubiquitin-like modifier activating enzyme 6 0.0308393
TMEM41B transmembrane protein 41B 0.0307669
BCLAF1 BCL2-associated transcription factor 1 0.0306575
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0306202
TENM2 teneurin transmembrane protein 2 0.0305658
RRM2 ribonucleotide reductase M2 0.0304822
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0304688
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0304589
BCAS1 breast carcinoma amplified sequence 1 0.0300247
ACTG1 actin gamma 1 0.029705
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0294811
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0294657
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 0.0290764
WWOX WW domain containing oxidoreductase 0.0290377
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0289376
CTNND1 catenin (cadherin-associated protein), delta 1 0.0288781
USP3 ubiquitin specific peptidase 3 0.0286054
RAD21 RAD21 homolog (S. pombe) 0.0285314
DENND4A DENN/MADD domain containing 4A 0.0284833
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0281712
KIF16B kinesin family member 16B 0.0279381
AUTS2 autism susceptibility candidate 2 0.0277853
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0273781
TOM1L1 target of myb1 (chicken)-like 1 0.0270199
INSIG1 insulin induced gene 1 0.0268111
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0267888
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0266599
NCAM2 neural cell adhesion molecule 2 0.0261826
CALR calreticulin 0.0261489
SUCO SUN domain containing ossification factor 0.0257851
TOP6BL TOP6B like initiator of meiotic double strand breaks 0.0257795
NAMPT nicotinamide phosphoribosyltransferase 0.0257276
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.025663
CSDE1 cold shock domain containing E1, RNA-binding 0.0256598
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0256312
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0256113
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0255451
GOLGA4 golgin A4 0.0249634
TFRC transferrin receptor 0.0249254
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0247821
NCOA7 nuclear receptor coactivator 7 0.0246966
MED13L mediator complex subunit 13-like 0.0244767
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0243898

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.18051
TMSB10 thymosin beta 10 -0.0927679
MT2A metallothionein 2A -0.0904206
RPL19 ribosomal protein L19 -0.0876411
NDRG1 N-myc downstream regulated 1 -0.0811342
RPL23 ribosomal protein L23 -0.0643779
S100A9 S100 calcium binding protein A9 -0.0566208
INTS6 integrator complex subunit 6 -0.0542645
FTH1 ferritin, heavy polypeptide 1 -0.0529864
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0528527
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0471597
S100A8 S100 calcium binding protein A8 -0.047013
RIMS2 regulating synaptic membrane exocytosis 2 -0.0465103
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0452417
FBXL20 F-box and leucine-rich repeat protein 20 -0.0426676
EGFR epidermal growth factor receptor -0.0419132
DYNLRB1 dynein, light chain, roadblock-type 1 -0.0413973
EFNA5 ephrin-A5 -0.0412728
MMP24OS MMP24 opposite strand -0.0399786
ANKRD12 ankyrin repeat domain 12 -0.039657
FTL ferritin, light polypeptide -0.0389403
RPL32 ribosomal protein L32 -0.0383957
IFI6 interferon, alpha-inducible protein 6 -0.0366051
SP100 SP100 nuclear antigen -0.035473
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0347744
CCND1 cyclin D1 -0.0344656
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0332208
ADNP activity-dependent neuroprotector homeobox -0.0328611
KRT86 keratin 86, type II -0.0308052
EIF1 eukaryotic translation initiation factor 1 -0.0303029
RAB7A RAB7A, member RAS oncogene family -0.0300198
AREG amphiregulin -0.0294225
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0282203
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0274816
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0273754
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0267082
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.026018
RPL35A ribosomal protein L35a -0.0257268
S100A11 S100 calcium binding protein A11 -0.0256032
RPS24 ribosomal protein S24 -0.0253658
PDE4D phosphodiesterase 4D, cAMP-specific -0.0252422
WSB1 WD repeat and SOCS box containing 1 -0.0252184
S100A7 S100 calcium binding protein A7 -0.0250994
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0245399
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 -0.02432
RPLP1 ribosomal protein, large, P1 -0.023935
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.023825
RPS29 ribosomal protein S29 -0.0238228
SLC38A2 solute carrier family 38, member 2 -0.0236882
RPL9 ribosomal protein L9 -0.0236068
NABP1 nucleic acid binding protein 1 -0.0235203
OSMR oncostatin M receptor -0.0231547
EPAS1 endothelial PAS domain protein 1 -0.0229471
RPL28 ribosomal protein L28 -0.0227876
RPL35 ribosomal protein L35 -0.0220283
S100P S100 calcium binding protein P -0.0217837
S100A14 S100 calcium binding protein A14 -0.0214708
SNX14 sorting nexin 14 -0.0213961
RPL31 ribosomal protein L31 -0.0211405
STXBP4 syntaxin binding protein 4 -0.0210978
ZBTB20 zinc finger and BTB domain containing 20 -0.0209674
LMO7 LIM domain 7 -0.0208014
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0206336
LOXL2 lysyl oxidase-like 2 -0.0205628
PLSCR2 phospholipid scramblase 2 -0.0202918
KDM4B lysine (K)-specific demethylase 4B -0.0201415
TXNRD1 thioredoxin reductase 1 -0.0200455
VIM vimentin -0.0199179
SYNRG synergin, gamma -0.0197655
GLCCI1 glucocorticoid induced 1 -0.0197644
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0196368
SLC38A1 solute carrier family 38, member 1 -0.0194284
PRR11 proline rich 11 -0.0194036
LOC112694756 uncharaterized LOC112694756 -0.0193583
RPL5 ribosomal protein L5 -0.0192664
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0191351
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0188849
ARMH4 armadillo like helical domain containing 4 -0.018772
UQCRB ubiquinol-cytochrome c reductase binding protein -0.018753
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0186946
TUBB4B tubulin, beta 4B class IVb -0.0186487
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0185766
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0185042
LOC102724023 ES1 protein homolog, mitochondrial -0.01845
PLSCR1 phospholipid scramblase 1 -0.0184463
VAPB VAMP (vesicle-associated membrane protein)-associated protein B and C -0.0184219
S100A10 S100 calcium binding protein A10 -0.0183797
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 -0.0182184
EGR1 early growth response 1 -0.0181467
RGS6 regulator of G-protein signaling 6 -0.0180228
NTN4 netrin 4 -0.0177431
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0174588
IFIH1 interferon induced with helicase C domain 1 -0.0173355
TPT1 tumor protein, translationally-controlled 1 -0.0172099
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0172001
FAM177A1 family with sequence similarity 177, member A1 -0.0171603
WARS1 tryptophanyl-tRNA synthetase 1 -0.0171276
TUBB tubulin, beta class I -0.0170743
RPL8 ribosomal protein L8 -0.0168843
CD44 CD44 molecule (Indian blood group) -0.0168841