Cytarabine (hydrochloride)_H4 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine (hydrochloride) perturbation in H4 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine (hydrochloride)_H4 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.208607
CXCL8 chemokine (C-X-C motif) ligand 8 0.10199
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0870948
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0798657
GDF15 growth differentiation factor 15 0.0723589
FAM13A family with sequence similarity 13, member A 0.0695291
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.061858
CADM1 cell adhesion molecule 1 0.0615617
TRIO trio Rho guanine nucleotide exchange factor 0.0537695
SDK1 sidekick cell adhesion molecule 1 0.0529817
STK17A serine/threonine kinase 17a 0.048673
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0483916
NAV2 neuron navigator 2 0.0398923
ZNF292 zinc finger protein 292 0.0392673
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0374238
OSBPL3 oxysterol binding protein-like 3 0.0353089
OGA O-GlcNAcase 0.0352745
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0349961
TRA2A transformer 2 alpha homolog (Drosophila) 0.0346887
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0339598
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0338006
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0337008
ANLN anillin, actin binding protein 0.0334323
ENO1 enolase 1, (alpha) 0.0332106
NAMPT nicotinamide phosphoribosyltransferase 0.0331126
GLS2 glutaminase 2 (liver, mitochondrial) 0.0329294
MXI1 MAX interactor 1, dimerization protein 0.0327769
KMT2E lysine (K)-specific methyltransferase 2E 0.0326239
UBE2O ubiquitin-conjugating enzyme E2O 0.0319127
TRIM22 tripartite motif containing 22 0.0312215
TNS3 tensin 3 0.0305939
APP amyloid beta (A4) precursor protein 0.0297023
PDE4D phosphodiesterase 4D, cAMP-specific 0.0296923
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0295396
CANX calnexin 0.0289632
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0288864
FAT1 FAT atypical cadherin 1 0.0277941
HELZ helicase with zinc finger 0.0276125
HIBADH 3-hydroxyisobutyrate dehydrogenase 0.0274487
PHF21A PHD finger protein 21A 0.0274388
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0274269
CD44 CD44 molecule (Indian blood group) 0.0273195
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0270437
CEMIP cell migration inducing protein, hyaluronan binding 0.0270362
KDM3A lysine (K)-specific demethylase 3A 0.0268509
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0267999
CD109 CD109 molecule 0.0266159
HOOK2 hook microtubule-tethering protein 2 0.0264977
USP3 ubiquitin specific peptidase 3 0.0263157
PTCHD4 patched domain containing 4 0.0262998
JARID2 jumonji, AT rich interactive domain 2 0.026251
EGFR epidermal growth factor receptor 0.0261436
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0260956
ADAM9 ADAM metallopeptidase domain 9 0.0259221
CDPF1 cysteine-rich, DPF motif domain containing 1 0.0256455
MAP2K1 mitogen-activated protein kinase kinase 1 0.0256098
NFE2L1 nuclear factor, erythroid 2-like 1 0.0254877
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0253237
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0253053
GPHN gephyrin 0.0252024
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0251513
HERC3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 0.0250696
MARCHF6 membrane associated ring-CH-type finger 6 0.0238454
ENKUR enkurin, TRPC channel interacting protein 0.0237304
ZMAT3 zinc finger, matrin-type 3 0.0237299
FNDC3B fibronectin type III domain containing 3B 0.0236666
RLF rearranged L-myc fusion 0.0230601
RNF213 ring finger protein 213 0.0225583
MEF2A myocyte enhancer factor 2A 0.0222184
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0222024
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0221713
NCKAP1 NCK-associated protein 1 0.0220792
ANXA5 annexin A5 0.0220332
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.0219825
CAMTA1 calmodulin binding transcription activator 1 0.021753
RUNX1 runt-related transcription factor 1 0.0216455
ARRDC3 arrestin domain containing 3 0.0213117
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0212934
MYLK myosin light chain kinase 0.0211797
SHB Src homology 2 domain containing adaptor protein B 0.0206812
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0205592
NLGN1 neuroligin 1 0.0205051
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0204843
TIMP3 TIMP metallopeptidase inhibitor 3 0.0204304
INHBA inhibin, beta A 0.0203862
TNIP1 TNFAIP3 interacting protein 1 0.0201624
E2F7 E2F transcription factor 7 0.0200854
SMAD3 SMAD family member 3 0.0200326
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0200058
CCDC14 coiled-coil domain containing 14 0.0198989
RIOK3 RIO kinase 3 0.0197727
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0197619
THBS1 thrombospondin 1 0.0196016
KCTD16 potassium channel tetramerization domain containing 16 0.0195617
MMP12 matrix metallopeptidase 12 0.0194183
WDR41 WD repeat domain 41 0.0192376
UGCG UDP-glucose ceramide glucosyltransferase 0.0192337
ZC3H12C zinc finger CCCH-type containing 12C 0.0191126
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0189718
NEK7 NIMA-related kinase 7 0.0189707

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.25816
MT2A metallothionein 2A -0.151836
IGFBP3 insulin-like growth factor binding protein 3 -0.142778
NALF1 NALCN channel auxiliary factor 1 -0.122988
TMSB10 thymosin beta 10 -0.117325
VIM vimentin -0.112451
EXT1 exostosin glycosyltransferase 1 -0.0957199
FTL ferritin, light polypeptide -0.0820596
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0717765
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0692457
IGFBP5 insulin-like growth factor binding protein 5 -0.0585276
PDLIM5 PDZ and LIM domain 5 -0.0559517
EGR1 early growth response 1 -0.0555371
TPM4 tropomyosin 4 -0.0546331
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0510197
OSMR oncostatin M receptor -0.049338
SBF2 SET binding factor 2 -0.047571
RPS6 ribosomal protein S6 -0.04734
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0467866
KYNU kynureninase -0.0461575
PHF14 PHD finger protein 14 -0.0456183
AKAP9 A kinase (PRKA) anchor protein 9 -0.0452739
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0441724
ASPH aspartate beta-hydroxylase -0.0426247
VCL vinculin -0.0425733
PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 -0.0416327
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0410599
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0405907
LOX lysyl oxidase -0.0405873
AKAP12 A kinase (PRKA) anchor protein 12 -0.0400355
MT1X metallothionein 1X -0.0398608
KDELR2 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2 -0.0394661
B2M beta-2-microglobulin -0.0385197
VMP1 vacuole membrane protein 1 -0.0384386
COL6A3 collagen, type VI, alpha 3 -0.0381944
COPA coatomer protein complex, subunit alpha -0.0380624
TTC17 tetratricopeptide repeat domain 17 -0.0372786
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0370721
GOLGB1 golgin B1 -0.0366226
ATM ATM serine/threonine kinase -0.035092
RPL28 ribosomal protein L28 -0.0348156
FBXO11 F-box protein 11 -0.034372
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0329959
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0315839
RPL35A ribosomal protein L35a -0.0315815
PRSS23 protease, serine, 23 -0.0314032
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0313826
WWTR1 WW domain containing transcription regulator 1 -0.0311957
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0311278
MORF4L2 mortality factor 4 like 2 -0.0310526
SLC38A2 solute carrier family 38, member 2 -0.0305695
ZNF432 zinc finger protein 432 -0.0304199
CLMP CXADR-like membrane protein -0.0303429
NABP1 nucleic acid binding protein 1 -0.0303034
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0302198
BBS9 Bardet-Biedl syndrome 9 -0.0301576
SCFD2 sec1 family domain containing 2 -0.0293958
GPATCH2L G patch domain containing 2-like -0.0293677
RPLP2 ribosomal protein, large, P2 -0.0293448
TMED3 transmembrane emp24 protein transport domain containing 3 -0.0289901
AHRR aryl-hydrocarbon receptor repressor -0.0281675
ACTN1 actinin, alpha 1 -0.028148
HM13 histocompatibility (minor) 13 -0.0280322
TPT1 tumor protein, translationally-controlled 1 -0.027897
CREB5 cAMP responsive element binding protein 5 -0.0276617
TGFBI transforming growth factor, beta-induced, 68kDa -0.027551
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0274426
IGF2 insulin-like growth factor 2 -0.0272924
CALR calreticulin -0.0271434
MYADM myeloid-associated differentiation marker -0.0270949
CARS1 cysteinyl-tRNA synthetase 1 -0.0269771
BPTF bromodomain PHD finger transcription factor -0.0267962
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0267936
SON SON DNA binding protein -0.026604
OXR1 oxidation resistance 1 -0.026528
GOSR2 golgi SNAP receptor complex member 2 -0.0264508
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.026392
MON2 MON2 homolog (S. cerevisiae) -0.0260932
RPLP1 ribosomal protein, large, P1 -0.0259493
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0259484
NPC1 Niemann-Pick disease, type C1 -0.0257391
EIF1 eukaryotic translation initiation factor 1 -0.0257365
RPL9 ribosomal protein L9 -0.0257348
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0255388
STC1 stanniocalcin 1 -0.0254366
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0249914
GOLGA4 golgin A4 -0.0248232
MCL1 myeloid cell leukemia 1 -0.0248069
RPS13 ribosomal protein S13 -0.0247731
TAS2R14 taste receptor, type 2, member 14 -0.0244469
PRH1 proline-rich protein HaeIII subfamily 1 -0.024399
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0243795
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0241832
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0241422
SRRM2 serine/arginine repetitive matrix 2 -0.0240088
COG5 component of oligomeric golgi complex 5 -0.0239887
ANKRD28 ankyrin repeat domain 28 -0.0238443
ARHGAP24 Rho GTPase activating protein 24 -0.0235999
RPL27A ribosomal protein L27a -0.0234719
MYO9A myosin IXA -0.0234611