Cytarabine (hydrochloride)_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine (hydrochloride) perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine (hydrochloride)_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.333751
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0876424
SPAG9 sperm associated antigen 9 0.0867863
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0584027
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0555273
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0545751
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0520925
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0483178
PCBP2 poly(rC) binding protein 2 0.0481238
SMOC1 SPARC related modular calcium binding 1 0.0473114
SOD2 superoxide dismutase 2, mitochondrial 0.0465378
KMT2C lysine (K)-specific methyltransferase 2C 0.0460263
DNER delta/notch-like EGF repeat containing 0.0452705
OGA O-GlcNAcase 0.044675
KDM6A lysine (K)-specific demethylase 6A 0.043617
CXCL8 chemokine (C-X-C motif) ligand 8 0.0406528
BZW1 basic leucine zipper and W2 domains 1 0.0397462
MON2 MON2 homolog (S. cerevisiae) 0.039073
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0355398
WDR43 WD repeat domain 43 0.0351298
RYR2 ryanodine receptor 2 (cardiac) 0.0348781
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0345567
RAB1A RAB1A, member RAS oncogene family 0.0344526
PTEN phosphatase and tensin homolog 0.0341684
DDB2 damage-specific DNA binding protein 2, 48kDa 0.0333552
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0332055
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0328883
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0312417
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0306414
CREB5 cAMP responsive element binding protein 5 0.0304094
GRB10 growth factor receptor-bound protein 10 0.0301825
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0296866
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0296155
ATAD1 ATPase family, AAA domain containing 1 0.0289465
PPM1D protein phosphatase, Mg2+/Mn2+ dependent, 1D 0.0272843
CANX calnexin 0.027013
WTAP Wilms tumor 1 associated protein 0.0262934
FN1 fibronectin 1 0.0251084
B2M beta-2-microglobulin 0.0247879
OASL 2'-5'-oligoadenylate synthetase-like 0.0246621
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0245944
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0245618
NUP58 nucleoporin 58 0.0244648
FAM13A family with sequence similarity 13, member A 0.0244459
GOLGA4 golgin A4 0.024232
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0241818
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0234828
ZNFX1 zinc finger, NFX1-type containing 1 0.0233169
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0232728
CAMTA1 calmodulin binding transcription activator 1 0.0231175
RAB7A RAB7A, member RAS oncogene family 0.0230098
HELZ helicase with zinc finger 0.0228537
EEF2 eukaryotic translation elongation factor 2 0.0228479
TRA2A transformer 2 alpha homolog (Drosophila) 0.0228164
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0227984
FNDC3A fibronectin type III domain containing 3A 0.0226811
S100A6 S100 calcium binding protein A6 0.0224681
SCN3A sodium channel, voltage gated, type III alpha subunit 0.0223325
BHLHE40 basic helix-loop-helix family, member e40 0.0222549
CSNK1G1 casein kinase 1, gamma 1 0.0222372
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0220675
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0220193
KMT2E lysine (K)-specific methyltransferase 2E 0.0217938
DENND4A DENN/MADD domain containing 4A 0.0217746
RIGI RNA sensor RIG-I 0.0217482
PTPRM protein tyrosine phosphatase, receptor type, M 0.0217301
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0212765
UBA6 ubiquitin-like modifier activating enzyme 6 0.0212267
CALR calreticulin 0.0210986
BIRC6 baculoviral IAP repeat containing 6 0.0208898
CCNL1 cyclin L1 0.0203519
ACTG1 actin gamma 1 0.0203486
ATF3 activating transcription factor 3 0.0199907
GPHN gephyrin 0.0197481
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain 0.0195834
FDXR ferredoxin reductase 0.0194945
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.0193216
ETV3 ets variant 3 0.0192296
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0190916
SDC4 syndecan 4 0.0189176
ZMAT3 zinc finger, matrin-type 3 0.0189168
GDF15 growth differentiation factor 15 0.0188994
COPA coatomer protein complex, subunit alpha 0.0187168
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0185312
HSPA4L heat shock 70kDa protein 4-like 0.0184748
SAR1A secretion associated, Ras related GTPase 1A 0.0184167
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0183527
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0182784
ARHGAP26 Rho GTPase activating protein 26 0.0179842
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.017851
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) 0.0178223
VCL vinculin 0.0176917
HILPDA hypoxia inducible lipid droplet-associated 0.0176895
JMJD1C jumonji domain containing 1C 0.0176705
IARS1 isoleucyl-tRNA synthetase 1 0.017638
IFRD1 interferon-related developmental regulator 1 0.0174228
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0172963
DENND1A DENN/MADD domain containing 1A 0.0172581
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0172507
EIF4B eukaryotic translation initiation factor 4B 0.0172177

decreased expression

Symbol Name Standardized Value
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.164809
GDA guanine deaminase -0.147372
TXNRD1 thioredoxin reductase 1 -0.141552
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.1397
ASPH aspartate beta-hydroxylase -0.122752
GRAMD1B GRAM domain containing 1B -0.120874
PSD3 pleckstrin and Sec7 domain containing 3 -0.117241
EFNA5 ephrin-A5 -0.107906
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.106766
PDE10A phosphodiesterase 10A -0.0957297
NAMPT nicotinamide phosphoribosyltransferase -0.0756459
MYOF myoferlin -0.0752886
TM4SF1 transmembrane 4 L six family member 1 -0.074095
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0733618
COL8A1 collagen, type VIII, alpha 1 -0.0699715
PDE4D phosphodiesterase 4D, cAMP-specific -0.0663835
COL5A2 collagen, type V, alpha 2 -0.0663652
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0633713
MAML3 mastermind-like 3 (Drosophila) -0.0619661
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0593393
TRIO trio Rho guanine nucleotide exchange factor -0.0584052
TFPI2 tissue factor pathway inhibitor 2 -0.0581677
CENPF centromere protein F, 350/400kDa -0.0580627
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0565174
PDLIM5 PDZ and LIM domain 5 -0.0500705
NRCAM neuronal cell adhesion molecule -0.0500086
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0494706
MFF mitochondrial fission factor -0.0479386
LIMCH1 LIM and calponin homology domains 1 -0.0478054
CTSC cathepsin C -0.0472427
VIM vimentin -0.0471386
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0463136
FTL ferritin, light polypeptide -0.0462746
PTGR1 prostaglandin reductase 1 -0.0462679
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0457124
SMYD3 SET and MYND domain containing 3 -0.0440331
RPS2 ribosomal protein S2 -0.0438838
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0411713
SLC38A2 solute carrier family 38, member 2 -0.0396141
TMSB10 thymosin beta 10 -0.0394931
RGS2 regulator of G-protein signaling 2 -0.0388844
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0388818
DST dystonin -0.0375555
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0371406
FLNB filamin B, beta -0.0370478
NEK7 NIMA-related kinase 7 -0.0368203
TNPO1 transportin 1 -0.0363952
SAMD4A sterile alpha motif domain containing 4A -0.0349729
MKI67 marker of proliferation Ki-67 -0.0340685
ARHGAP29 Rho GTPase activating protein 29 -0.0328862
SLC44A1 solute carrier family 44 (choline transporter), member 1 -0.0325413
NDRG1 N-myc downstream regulated 1 -0.0323945
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0320802
BCAR3 breast cancer anti-estrogen resistance 3 -0.0311285
BASP1 brain abundant, membrane attached signal protein 1 -0.0310696
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0307994
LAMB1 laminin, beta 1 -0.0298152
ANTXR1 anthrax toxin receptor 1 -0.0290474
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) -0.0289584
SRGN serglycin -0.0286871
KRT19 keratin 19, type I -0.0273138
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0270755
BDNF brain-derived neurotrophic factor -0.0268106
PRDX1 peroxiredoxin 1 -0.0267653
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0267408
RAB3B RAB3B, member RAS oncogene family -0.0260398
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.025497
OSMR oncostatin M receptor -0.0254392
MT2A metallothionein 2A -0.0247287
RPS24 ribosomal protein S24 -0.0245657
TGFBI transforming growth factor, beta-induced, 68kDa -0.0245129
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0244436
SORBS2 sorbin and SH3 domain containing 2 -0.0241938
PALLD palladin, cytoskeletal associated protein -0.0240973
RPS23 ribosomal protein S23 -0.0240364
PYGL phosphorylase, glycogen, liver -0.0239029
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0236202
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0235684
TBXT T-box transcription factor T -0.0233317
RPS6 ribosomal protein S6 -0.0222355
ANKRD28 ankyrin repeat domain 28 -0.022046
DOCK5 dedicator of cytokinesis 5 -0.0219367
NPAS2 neuronal PAS domain protein 2 -0.0218794
RTN1 reticulon 1 -0.0218721
CDK6 cyclin-dependent kinase 6 -0.0214789
ZEB2 zinc finger E-box binding homeobox 2 -0.0214097
RPL31 ribosomal protein L31 -0.0213828
GREM2 gremlin 2, DAN family BMP antagonist -0.0213645
CTSL cathepsin L -0.0213632
EZR ezrin -0.0213403
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0211776
TGFBR1 transforming growth factor, beta receptor 1 -0.0208826
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0199417
AKR1C1 aldo-keto reductase family 1, member C1 -0.0192758
PRKACB protein kinase, cAMP-dependent, catalytic, beta -0.0192143
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0190305
CLTC clathrin, heavy chain (Hc) -0.0189851
ATXN1 ataxin 1 -0.0188971
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0187703
ETV1 ets variant 1 -0.018606