Cytarabine (hydrochloride)_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine (hydrochloride) perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine (hydrochloride)_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TSC22D2 TSC22 domain family, member 2 0.0713427
ZNF292 zinc finger protein 292 0.0552227
PCBP2 poly(rC) binding protein 2 0.0480962
PICALM phosphatidylinositol binding clathrin assembly protein 0.0464895
HDAC9 histone deacetylase 9 0.0444539
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0440896
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0420087
DST dystonin 0.0386576
WDR43 WD repeat domain 43 0.0378908
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0378105
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.0374236
NCKAP1 NCK-associated protein 1 0.0361027
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0347213
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0330705
ADAM9 ADAM metallopeptidase domain 9 0.0310509
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B 0.0308002
RBM33 RNA binding motif protein 33 0.0291388
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0286248
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0285909
YAP1 Yes-associated protein 1 0.0278961
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0276074
CCNL1 cyclin L1 0.0273739
GASK1B golgi associated kinase 1B 0.0271869
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0269438
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0267298
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0266115
CFL2 cofilin 2 (muscle) 0.0259595
MEMO1 mediator of cell motility 1 0.0256905
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0256658
KIF1B kinesin family member 1B 0.0256198
DMXL1 Dmx-like 1 0.0255244
MB21D2 Mab-21 domain containing 2 0.0253701
PUM2 pumilio RNA-binding family member 2 0.0252708
CCNY cyclin Y 0.0250377
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 0.0250085
FAR1 fatty acyl CoA reductase 1 0.0249904
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 0.0249793
ZFAND3 zinc finger, AN1-type domain 3 0.0248496
NAMPT nicotinamide phosphoribosyltransferase 0.0246786
USP12 ubiquitin specific peptidase 12 0.0245332
ITGAV integrin, alpha V 0.0243762
XPO1 exportin 1 0.0243127
ENAH enabled homolog (Drosophila) 0.0242462
CAMKMT calmodulin-lysine N-methyltransferase 0.0241587
SPAG9 sperm associated antigen 9 0.0241084
DSCAM Down syndrome cell adhesion molecule 0.0237219
MTF2 metal response element binding transcription factor 2 0.0233613
FBXO11 F-box protein 11 0.0230589
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0230511
NTM neurotrimin 0.0230242
MYH9 myosin, heavy chain 9, non-muscle 0.0228806
USP3 ubiquitin specific peptidase 3 0.0227973
MYO10 myosin X 0.0225697
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0225407
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0224073
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0223281
SYT1 synaptotagmin I 0.0218839
TPM3 tropomyosin 3 0.021868
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 0.0216685
LHFPL6 LHFPL tetraspan subfamily member 6 0.0216215
APP amyloid beta (A4) precursor protein 0.0215658
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0212725
POTEF POTE ankyrin domain family, member F 0.021175
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0210886
AKAP9 A kinase (PRKA) anchor protein 9 0.0209387
EMC1 ER membrane protein complex subunit 1 0.0208591
ZEB2 zinc finger E-box binding homeobox 2 0.0206446
ANKRD33B ankyrin repeat domain 33B 0.0205898
RHEB Ras homolog enriched in brain 0.0205406
CCDC88A coiled-coil domain containing 88A 0.0202675
SLC35F5 solute carrier family 35, member F5 0.0202505
ABI1 abl-interactor 1 0.0197974
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.019711
PDGFC platelet derived growth factor C 0.0197096
FAM168A family with sequence similarity 168, member A 0.0195959
NPTN neuroplastin 0.0194393
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0192678
ZBTB35 zinc finger and BTB domain containing 35 0.0191039
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0189034
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0188885
PDS5B PDS5 cohesin associated factor B 0.0188774
SERTAD2 SERTA domain containing 2 0.0188516
PAWR PRKC, apoptosis, WT1, regulator 0.0187688
ZNF451 zinc finger protein 451 0.0187357
XPO4 exportin 4 0.0186388
CAMTA1 calmodulin binding transcription activator 1 0.0186225
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0185887
NBAS neuroblastoma amplified sequence 0.0185858
RBM20 RNA binding motif protein 20 0.0185316
AFAP1 actin filament associated protein 1 0.0184968
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0184133
CDC73 cell division cycle 73 0.0183968
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0183669
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0183538
KMT2C lysine (K)-specific methyltransferase 2C 0.0182315
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0182183
UBE3A ubiquitin protein ligase E3A 0.0180404
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0179842
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.017938
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0178587

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.282191
TMSB10 thymosin beta 10 -0.153692
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.136151
PTMA prothymosin, alpha -0.134253
COL11A1 collagen, type XI, alpha 1 -0.120151
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.116674
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.110528
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.10113
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0973688
PCLO piccolo presynaptic cytomatrix protein -0.0965709
CADM2 cell adhesion molecule 2 -0.0956542
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0881346
RPLP1 ribosomal protein, large, P1 -0.0841649
GNAS GNAS complex locus -0.0818486
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0817987
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0745474
RPS6 ribosomal protein S6 -0.0743937
RPS8 ribosomal protein S8 -0.0731634
MKI67 marker of proliferation Ki-67 -0.071575
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0663337
RPS16 ribosomal protein S16 -0.0625385
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0614513
GPC3 glypican 3 -0.057251
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0568477
H1-0 H1.0 linker histone -0.0546433
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0541784
TPT1 tumor protein, translationally-controlled 1 -0.0529514
PCDH9 protocadherin 9 -0.0525989
MYL12B myosin, light chain 12B, regulatory -0.0523599
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0499284
FOXP2 forkhead box P2 -0.0491847
MEIS2 Meis homeobox 2 -0.0491223
MDK midkine (neurite growth-promoting factor 2) -0.0474788
CAVIN1 caveolae associated protein 1 -0.0473428
RPL12 ribosomal protein L12 -0.0466479
PEG10 paternally expressed 10 -0.0463916
CNRIP1 cannabinoid receptor interacting protein 1 -0.0449384
RPS24 ribosomal protein S24 -0.0434159
PFN1 profilin 1 -0.0433689
RPS21 ribosomal protein S21 -0.0431923
RPL35A ribosomal protein L35a -0.0422746
RPS19 ribosomal protein S19 -0.0414762
SRP72 signal recognition particle 72kDa -0.0408668
NIPBL Nipped-B homolog (Drosophila) -0.0406204
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0402819
CALR calreticulin -0.0396025
CENPF centromere protein F, 350/400kDa -0.039071
HMGB1 high mobility group box 1 -0.0389259
RPL34 ribosomal protein L34 -0.0387864
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0387343
RPLP0 ribosomal protein, large, P0 -0.0382271
COL1A2 collagen, type I, alpha 2 -0.0375241
HSPB1 heat shock 27kDa protein 1 -0.0368965
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0368154
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0365309
CKAP2 cytoskeleton associated protein 2 -0.036036
RPL11 ribosomal protein L11 -0.0359742
FTL ferritin, light polypeptide -0.0357637
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0342426
RPL19 ribosomal protein L19 -0.0337775
RACK1 receptor for activated C kinase 1 -0.0335845
KIF4A kinesin family member 4A -0.0335112
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0335075
RSL1D1 ribosomal L1 domain containing 1 -0.0334173
TPR translocated promoter region, nuclear basket protein -0.0332391
GOLGA4 golgin A4 -0.0322451
LOC102724023 ES1 protein homolog, mitochondrial -0.0318672
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0311784
RPL38 ribosomal protein L38 -0.0311229
MTDH metadherin -0.0309057
RPS3 ribosomal protein S3 -0.030779
SERF2 small EDRK-rich factor 2 -0.030691
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0303919
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0303178
MAP4 microtubule-associated protein 4 -0.0302511
EIF5B eukaryotic translation initiation factor 5B -0.0302219
DPYD dihydropyrimidine dehydrogenase -0.0300917
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0300351
ACTN4 actinin, alpha 4 -0.0298547
YBX1 Y box binding protein 1 -0.0295544
ADGRL2 adhesion G protein-coupled receptor L2 -0.0290915
RPLP2 ribosomal protein, large, P2 -0.0285372
DEK DEK proto-oncogene -0.0282803
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0282801
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0282706
RPS27 ribosomal protein S27 -0.0282388
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0282231
EIF1 eukaryotic translation initiation factor 1 -0.0279986
S100A10 S100 calcium binding protein A10 -0.027773
AKAP12 A kinase (PRKA) anchor protein 12 -0.0277274
SMC4 structural maintenance of chromosomes 4 -0.0275085
RPL27A ribosomal protein L27a -0.0273659
RAD21 RAD21 homolog (S. pombe) -0.0271467
RPL28 ribosomal protein L28 -0.0268392
NUSAP1 nucleolar and spindle associated protein 1 -0.0268265
METAP2 methionyl aminopeptidase 2 -0.0267504
FAM177A1 family with sequence similarity 177, member A1 -0.0267465
LRRC4C leucine rich repeat containing 4C -0.0267375
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0266434
SGO2 shugoshin 2 -0.0266179