Cytarabine_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.118518
GARS1 glycyl-tRNA synthetase 1 0.0900834
ANLN anillin, actin binding protein 0.0869235
MBNL2 muscleblind-like splicing regulator 2 0.0802404
EIF1 eukaryotic translation initiation factor 1 0.0778501
ZFAND3 zinc finger, AN1-type domain 3 0.0755596
TES testin LIM domain protein 0.0731372
EMP1 epithelial membrane protein 1 0.0713746
AREG amphiregulin 0.068714
RPS6 ribosomal protein S6 0.0616703
ZNF292 zinc finger protein 292 0.0611953
ATXN1 ataxin 1 0.0605488
OGA O-GlcNAcase 0.058106
GOLGA4 golgin A4 0.0579008
ANKRD11 ankyrin repeat domain 11 0.0576869
SPAG9 sperm associated antigen 9 0.0561478
ERRFI1 ERBB receptor feedback inhibitor 1 0.0539491
KDM3A lysine (K)-specific demethylase 3A 0.0532057
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0519456
RPS3 ribosomal protein S3 0.0516407
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0510876
ESRP1 epithelial splicing regulatory protein 1 0.0501432
RBM39 RNA binding motif protein 39 0.0495174
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0490804
RAB6A RAB6A, member RAS oncogene family 0.0489386
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0488678
ESYT2 extended synaptotagmin-like protein 2 0.0471707
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0465598
PDIA4 protein disulfide isomerase family A, member 4 0.0465424
TPD52 tumor protein D52 0.0461039
TRA2A transformer 2 alpha homolog (Drosophila) 0.0457873
FGFR2 fibroblast growth factor receptor 2 0.0457006
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.04519
FAM13A family with sequence similarity 13, member A 0.0450747
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0450142
KMT2E lysine (K)-specific methyltransferase 2E 0.0449754
PREPL prolyl endopeptidase-like 0.0441247
ARHGAP29 Rho GTPase activating protein 29 0.0436932
COG5 component of oligomeric golgi complex 5 0.0436545
RAB1A RAB1A, member RAS oncogene family 0.0430048
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0427419
ITGA6 integrin, alpha 6 0.0427079
TPX2 TPX2, microtubule-associated 0.0423782
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0422208
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0420328
KLHL29 kelch-like family member 29 0.0416383
DIAPH3 diaphanous-related formin 3 0.0413303
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0411867
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0407655
PNISR PNN-interacting serine/arginine-rich protein 0.0404463
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0404112
KMT2C lysine (K)-specific methyltransferase 2C 0.0403777
WSB1 WD repeat and SOCS box containing 1 0.039821
YEATS2 YEATS domain containing 2 0.039009
FNDC3B fibronectin type III domain containing 3B 0.0390048
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0376423
HKDC1 hexokinase domain containing 1 0.0367471
NDRG1 N-myc downstream regulated 1 0.0363072
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0361535
MIS18BP1 MIS18 binding protein 1 0.0360894
HELZ helicase with zinc finger 0.0359556
BIRC6 baculoviral IAP repeat containing 6 0.035555
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0354842
PDIA6 protein disulfide isomerase family A, member 6 0.0354016
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0353822
DSCAM Down syndrome cell adhesion molecule 0.0352012
ARHGAP12 Rho GTPase activating protein 12 0.0350268
S100P S100 calcium binding protein P 0.0347343
PRELID2 PRELI domain containing 2 0.0345741
ARGLU1 arginine and glutamate rich 1 0.0345383
CTNND1 catenin (cadherin-associated protein), delta 1 0.0344753
RLF rearranged L-myc fusion 0.0344531
TOP1 topoisomerase (DNA) I 0.0343423
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0341042
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.034052
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0333856
AHNAK AHNAK nucleoprotein 0.033043
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0329299
IARS1 isoleucyl-tRNA synthetase 1 0.0328912
RPL37A ribosomal protein L37a 0.032637
FNIP1 folliculin interacting protein 1 0.0319381
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0318763
ANKRD10 ankyrin repeat domain 10 0.0316261
RPL18 ribosomal protein L18 0.0315592
MORF4L2 mortality factor 4 like 2 0.0314744
ZFC3H1 zinc finger, C3H1-type containing 0.0313789
TMF1 TATA element modulatory factor 1 0.0310167
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.0310067
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0309935
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0308119
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0307907
CDK19 cyclin-dependent kinase 19 0.0307459
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0305108
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0304841
XPO1 exportin 1 0.0303093
HIBADH 3-hydroxyisobutyrate dehydrogenase 0.0302448
ZCCHC7 zinc finger, CCHC domain containing 7 0.0302105
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0300253
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0296728
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0296516

decreased expression

Symbol Name Standardized Value
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.149737
GMDS GDP-mannose 4,6-dehydratase -0.141194
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.119198
LMO7 LIM domain 7 -0.103958
FTH1 ferritin, heavy polypeptide 1 -0.101403
TMC5 transmembrane channel-like 5 -0.0945825
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0945049
CEMIP cell migration inducing protein, hyaluronan binding -0.083315
LOC112694756 uncharaterized LOC112694756 -0.0795834
RNF213 ring finger protein 213 -0.0761512
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0745508
FAT1 FAT atypical cadherin 1 -0.0744938
PLSCR1 phospholipid scramblase 1 -0.0660703
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0638354
HLA-A major histocompatibility complex, class I, A -0.0626094
CDK6 cyclin-dependent kinase 6 -0.0605854
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0586018
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0550235
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.054974
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0541915
PRSS3 protease, serine, 3 -0.0521399
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0510156
S100A6 S100 calcium binding protein A6 -0.0502183
ASPH aspartate beta-hydroxylase -0.0497704
POTEF POTE ankyrin domain family, member F -0.0495327
SP100 SP100 nuclear antigen -0.0491017
AOPEP aminopeptidase O (putative) -0.0470325
TMEM45B transmembrane protein 45B -0.0469267
ETV6 ets variant 6 -0.0466542
MUC17 mucin 17, cell surface associated -0.046183
MCU mitochondrial calcium uniporter -0.0459509
TM4SF1 transmembrane 4 L six family member 1 -0.0452151
CALR calreticulin -0.0435181
TMSB10 thymosin beta 10 -0.0434879
WWC1 WW and C2 domain containing 1 -0.0424663
HLA-E major histocompatibility complex, class I, E -0.0419676
ATF5 activating transcription factor 5 -0.0412434
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0411343
SH3RF1 SH3 domain containing ring finger 1 -0.0401612
TXNRD1 thioredoxin reductase 1 -0.0401509
SEPTIN9 septin 9 -0.0399616
PDIA3 protein disulfide isomerase family A, member 3 -0.0393509
ACACA acetyl-CoA carboxylase alpha -0.0386145
TNIK TRAF2 and NCK interacting kinase -0.0383006
PKM pyruvate kinase, muscle -0.0380616
FOXP1 forkhead box P1 -0.0375073
ITGB4 integrin, beta 4 -0.0368093
SPIDR scaffolding protein involved in DNA repair -0.0350106
B2M beta-2-microglobulin -0.0346764
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.0346497
CUX1 cut-like homeobox 1 -0.0346058
ATP11A ATPase, class VI, type 11A -0.0343732
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0342838
SAMD12 sterile alpha motif domain containing 12 -0.0340029
MYO1E myosin IE -0.0338434
MUC13 mucin 13, cell surface associated -0.0328133
RRBP1 ribosome binding protein 1 -0.0327956
IFI6 interferon, alpha-inducible protein 6 -0.0325313
MX1 MX dynamin-like GTPase 1 -0.0321215
TAPBP TAP binding protein (tapasin) -0.032035
MX2 MX dynamin-like GTPase 2 -0.0319362
KRT18 keratin 18, type I -0.0317251
TTYH3 tweety family member 3 -0.0316103
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0314266
PHF14 PHD finger protein 14 -0.0312181
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 -0.031164
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0310706
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0309769
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0308575
ATM ATM serine/threonine kinase -0.0305384
LCN2 lipocalin 2 -0.0304874
UBASH3B ubiquitin associated and SH3 domain containing B -0.0302579
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 -0.0302508
MTUS1 microtubule associated tumor suppressor 1 -0.0301519
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0301013
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0297087
RIGI RNA sensor RIG-I -0.0292718
MGAM2 maltase-glucoamylase 2 (putative) -0.0292058
OSBPL10 oxysterol binding protein-like 10 -0.0287346
LOC102724023 ES1 protein homolog, mitochondrial -0.0286781
RUNX1 runt-related transcription factor 1 -0.0284966
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0284886
RAB7A RAB7A, member RAS oncogene family -0.028221
NCOA7 nuclear receptor coactivator 7 -0.0282156
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0279573
PRRC2B proline-rich coiled-coil 2B -0.0278653
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0277913
PRKCA protein kinase C, alpha -0.0274746
EFNA5 ephrin-A5 -0.0271823
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0270167
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0265745
TNRC18 trinucleotide repeat containing 18 -0.0263065
TRAPPC9 trafficking protein particle complex 9 -0.0261315
VEGFA vascular endothelial growth factor A -0.0259417
MYO1D myosin ID -0.0259259
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0254464
EPCAM epithelial cell adhesion molecule -0.0254236
EPSTI1 epithelial stromal interaction 1 (breast) -0.025408
ADAR adenosine deaminase, RNA-specific -0.0252524
YAP1 Yes-associated protein 1 -0.0252034