Cytarabine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.0998613
KTN1 kinectin 1 (kinesin receptor) 0.0789714
ERRFI1 ERBB receptor feedback inhibitor 1 0.0787535
SET SET nuclear proto-oncogene 0.0756641
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0722979
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0719595
RPS12 ribosomal protein S12 0.0716447
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0708611
EREG epiregulin 0.0649104
KMT2E lysine (K)-specific methyltransferase 2E 0.0628133
RPS2 ribosomal protein S2 0.0594574
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.058412
SLK STE20-like kinase 0.0571051
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0566233
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0543463
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0529316
OGA O-GlcNAcase 0.0486349
ADAM17 ADAM metallopeptidase domain 17 0.048277
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0463234
DST dystonin 0.0457189
XPO1 exportin 1 0.0454519
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0447122
CSNK1A1 casein kinase 1, alpha 1 0.0442681
GOLGA4 golgin A4 0.0429412
PDIA6 protein disulfide isomerase family A, member 6 0.042855
YEATS2 YEATS domain containing 2 0.0422615
RPL37A ribosomal protein L37a 0.0416137
WDR43 WD repeat domain 43 0.041257
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0395751
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0394091
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0384564
SLC38A2 solute carrier family 38, member 2 0.038108
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0377226
ARRDC3 arrestin domain containing 3 0.0375151
FMNL2 formin-like 2 0.0369324
TSC22D1 TSC22 domain family, member 1 0.0369269
AKAP10 A kinase (PRKA) anchor protein 10 0.0368349
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0368057
GIGYF2 GRB10 interacting GYF protein 2 0.0363886
ZNF292 zinc finger protein 292 0.0361125
RAI1 retinoic acid induced 1 0.0360863
HDGF hepatoma-derived growth factor 0.0355421
F2R coagulation factor II (thrombin) receptor 0.0355411
PTBP2 polypyrimidine tract binding protein 2 0.0354333
DOCK11 dedicator of cytokinesis 11 0.0349132
JMJD1C jumonji domain containing 1C 0.034489
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0344074
CAPRIN2 caprin family member 2 0.0342434
SBF2 SET binding factor 2 0.0342367
GPBP1 GC-rich promoter binding protein 1 0.0342209
BCAR3 breast cancer anti-estrogen resistance 3 0.034121
ZNF148 zinc finger protein 148 0.0335115
ANKRD12 ankyrin repeat domain 12 0.0333161
CLIP2 CAP-GLY domain containing linker protein 2 0.032974
PGK1 phosphoglycerate kinase 1 0.0324193
RPS6 ribosomal protein S6 0.031679
PLK2 polo-like kinase 2 0.0315925
KIAA1958 KIAA1958 0.0313891
CDK19 cyclin-dependent kinase 19 0.0311908
NUP58 nucleoporin 58 0.0311026
FAM13B family with sequence similarity 13, member B 0.0308172
ESYT2 extended synaptotagmin-like protein 2 0.0306485
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.030507
PDE8A phosphodiesterase 8A 0.0305051
TPR translocated promoter region, nuclear basket protein 0.0303692
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0302663
SBNO1 strawberry notch homolog 1 (Drosophila) 0.030125
SQSTM1 sequestosome 1 0.0300131
PNISR PNN-interacting serine/arginine-rich protein 0.0298254
FOXJ3 forkhead box J3 0.029805
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0294464
TXNIP thioredoxin interacting protein 0.0291893
GYS1 glycogen synthase 1 (muscle) 0.0287483
TPM3 tropomyosin 3 0.0287183
UBA6 ubiquitin-like modifier activating enzyme 6 0.0279838
MBNL2 muscleblind-like splicing regulator 2 0.0279486
WSB1 WD repeat and SOCS box containing 1 0.0276586
SETD5 SET domain containing 5 0.027626
NGLY1 N-glycanase 1 0.0274735
MKI67 marker of proliferation Ki-67 0.0271314
HELZ helicase with zinc finger 0.0269205
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0266196
OPTN optineurin 0.0264457
WAC WW domain containing adaptor with coiled-coil 0.0264336
SEC24A SEC24 family member A 0.0262666
BRWD1 bromodomain and WD repeat domain containing 1 0.0261325
RNF145 ring finger protein 145 0.026051
CEP170 centrosomal protein 170kDa 0.0258955
ANKRD36 ankyrin repeat domain 36 0.0258648
MYOF myoferlin 0.0258452
RASAL2 RAS protein activator like 2 0.025813
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0257851
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0257779
WWTR1 WW domain containing transcription regulator 1 0.0257279
SRSF4 serine/arginine-rich splicing factor 4 0.0257115
UBA2 ubiquitin-like modifier activating enzyme 2 0.0256412
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0256338
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0256294
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0252439
SEPTIN7 septin 7 0.0252369

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.306832
TMSB10 thymosin beta 10 -0.181499
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.162242
MT2A metallothionein 2A -0.130956
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.108042
LOC112694756 uncharaterized LOC112694756 -0.0978178
TP63 tumor protein p63 -0.087569
FTL ferritin, light polypeptide -0.0847068
TM4SF1 transmembrane 4 L six family member 1 -0.0836297
TPT1 tumor protein, translationally-controlled 1 -0.0733392
RPL35A ribosomal protein L35a -0.0701096
MT1X metallothionein 1X -0.0692569
PSD3 pleckstrin and Sec7 domain containing 3 -0.063235
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0604629
HDLBP high density lipoprotein binding protein -0.0568532
FTH1 ferritin, heavy polypeptide 1 -0.0567566
CANX calnexin -0.0553801
APP amyloid beta (A4) precursor protein -0.0547203
EGR1 early growth response 1 -0.0546676
RPS24 ribosomal protein S24 -0.0534507
CADM2 cell adhesion molecule 2 -0.0507496
TNS3 tensin 3 -0.0460665
WARS1 tryptophanyl-tRNA synthetase 1 -0.0459374
AHNAK AHNAK nucleoprotein -0.0458004
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0456524
RAB7A RAB7A, member RAS oncogene family -0.0453235
CMIP c-Maf inducing protein -0.044249
YBX1 Y box binding protein 1 -0.043558
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0420649
NPAS2 neuronal PAS domain protein 2 -0.0410289
H1-0 H1.0 linker histone -0.0402537
SP100 SP100 nuclear antigen -0.0396756
HMGA1 high mobility group AT-hook 1 -0.0393029
SPRY4 sprouty homolog 4 (Drosophila) -0.0390912
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0387981
RNF213 ring finger protein 213 -0.0382433
LDHA lactate dehydrogenase A -0.0377725
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0376108
RPLP1 ribosomal protein, large, P1 -0.0374483
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0362714
IARS1 isoleucyl-tRNA synthetase 1 -0.0349708
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0346917
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0346093
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.034522
INTS6 integrator complex subunit 6 -0.0344543
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0335974
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0332434
CALR calreticulin -0.0327379
BSG basigin (Ok blood group) -0.0325643
PRRC2B proline-rich coiled-coil 2B -0.0310112
VIM vimentin -0.0309357
NFE2L2 nuclear factor, erythroid 2-like 2 -0.030123
ARF1 ADP-ribosylation factor 1 -0.0300874
PLSCR1 phospholipid scramblase 1 -0.0299707
GARS1 glycyl-tRNA synthetase 1 -0.0297907
RPLP0 ribosomal protein, large, P0 -0.0295352
FUS FUS RNA binding protein -0.0295161
RPS19 ribosomal protein S19 -0.0294549
ZBTB38 zinc finger and BTB domain containing 38 -0.029179
HLA-B major histocompatibility complex, class I, B -0.0290899
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0287024
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0281895
TMSB4X thymosin beta 4, X-linked -0.0280668
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0276235
PDIA4 protein disulfide isomerase family A, member 4 -0.0264347
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0262591
IFRD1 interferon-related developmental regulator 1 -0.0262269
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.026152
MYL12B myosin, light chain 12B, regulatory -0.0256782
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0256377
OSMR oncostatin M receptor -0.0255753
SDCCAG8 serologically defined colon cancer antigen 8 -0.0255227
GNAS GNAS complex locus -0.0254151
SKP1 S-phase kinase-associated protein 1 -0.025159
KDM3A lysine (K)-specific demethylase 3A -0.0250825
DPYD dihydropyrimidine dehydrogenase -0.0250655
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0247079
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0245575
KDM4B lysine (K)-specific demethylase 4B -0.0244523
TFRC transferrin receptor -0.0244081
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0243316
ZNF217 zinc finger protein 217 -0.0243129
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0241997
RPS4X ribosomal protein S4, X-linked -0.0240634
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0239271
TSC22D2 TSC22 domain family, member 2 -0.0238915
MCTP1 multiple C2 domains, transmembrane 1 -0.0238551
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0237736
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0237515
ARHGAP5 Rho GTPase activating protein 5 -0.0236486
VDAC1 voltage-dependent anion channel 1 -0.0235208
SPDYA speedy/RINGO cell cycle regulator family member A -0.023166
AGO2 argonaute RISC catalytic component 2 -0.0231378
HMGB1 high mobility group box 1 -0.0230079
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0227668
BICD1 bicaudal D homolog 1 (Drosophila) -0.0226292
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0225233
COTL1 coactosin-like F-actin binding protein 1 -0.0224498
LARP4B La ribonucleoprotein domain family, member 4B -0.0223892
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0223606