Cytarabine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.201616
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.190333
VIM vimentin 0.141878
ACTG1 actin gamma 1 0.120989
CXCL8 chemokine (C-X-C motif) ligand 8 0.0923698
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0823192
TFPI2 tissue factor pathway inhibitor 2 0.0789663
EEF2 eukaryotic translation elongation factor 2 0.0777039
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0770611
POTEF POTE ankyrin domain family, member F 0.0722152
PDIA6 protein disulfide isomerase family A, member 6 0.0699061
TPD52 tumor protein D52 0.0567237
ELL2 elongation factor, RNA polymerase II, 2 0.0559908
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0556684
UGCG UDP-glucose ceramide glucosyltransferase 0.0544439
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0543779
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0543758
SLC38A2 solute carrier family 38, member 2 0.0508116
BHLHE40 basic helix-loop-helix family, member e40 0.047629
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0469042
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0467292
PLS3 plastin 3 0.0463944
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0463434
TFG TRK-fused gene 0.0460061
EIF1 eukaryotic translation initiation factor 1 0.04548
TPM4 tropomyosin 4 0.0454103
THBS1 thrombospondin 1 0.045204
KLF6 Kruppel-like factor 6 0.0444253
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0442699
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0441369
PRR16 proline rich 16 0.0441202
RNF145 ring finger protein 145 0.0430213
IL6 interleukin 6 0.0425109
FMNL2 formin-like 2 0.0419559
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0416346
VEZT vezatin, adherens junctions transmembrane protein 0.0407703
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.03924
FAM168A family with sequence similarity 168, member A 0.0381469
NEGR1 neuronal growth regulator 1 0.0378624
CHN1 chimerin 1 0.037743
COPA coatomer protein complex, subunit alpha 0.0377041
HDAC9 histone deacetylase 9 0.0372124
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0372113
AHR aryl hydrocarbon receptor 0.0369972
GNAS GNAS complex locus 0.0367654
LDHA lactate dehydrogenase A 0.0366761
DEK DEK proto-oncogene 0.0365235
PAWR PRKC, apoptosis, WT1, regulator 0.0361332
YME1L1 YME1-like 1 ATPase 0.0359694
WDR43 WD repeat domain 43 0.0356492
NAP1L1 nucleosome assembly protein 1-like 1 0.035422
IST1 increased sodium tolerance 1 homolog (yeast) 0.0348811
FNBP1L formin binding protein 1-like 0.0348158
ENO1 enolase 1, (alpha) 0.0346622
S100A10 S100 calcium binding protein A10 0.0341573
S100A6 S100 calcium binding protein A6 0.0338373
DST dystonin 0.0336984
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0334378
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0333305
MITF microphthalmia-associated transcription factor 0.0331484
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0331345
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0331238
IGF2 insulin-like growth factor 2 0.0331231
FLNB filamin B, beta 0.0328949
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0323853
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0323716
ARHGAP12 Rho GTPase activating protein 12 0.0321408
SRGN serglycin 0.0320829
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0319581
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.03149
MORF4L1 mortality factor 4 like 1 0.0310037
PA2G4 proliferation-associated 2G4, 38kDa 0.0309783
PRRC1 proline-rich coiled-coil 1 0.0306024
PAFAH1B2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa) 0.0304137
ANXA1 annexin A1 0.0303981
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0299391
RBM25 RNA binding motif protein 25 0.0297669
ADAM17 ADAM metallopeptidase domain 17 0.0292295
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0288218
PDLIM5 PDZ and LIM domain 5 0.028743
ANKRD11 ankyrin repeat domain 11 0.028714
CD109 CD109 molecule 0.0281126
RAB18 RAB18, member RAS oncogene family 0.0279616
MTMR3 myotubularin related protein 3 0.0277647
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0277363
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0276678
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0275866
KMT2E lysine (K)-specific methyltransferase 2E 0.0275429
SEPTIN7 septin 7 0.027537
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0274463
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0273734
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0273396
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0272813
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0272353
DCAF5 DDB1 and CUL4 associated factor 5 0.0272023
TPR translocated promoter region, nuclear basket protein 0.0271033
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 0.0270304
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 0.026889
CCL2 chemokine (C-C motif) ligand 2 0.0268309
WDR36 WD repeat domain 36 0.0267881

decreased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 -0.168964
GRAMD1B GRAM domain containing 1B -0.157967
PDE4D phosphodiesterase 4D, cAMP-specific -0.128372
TM4SF1 transmembrane 4 L six family member 1 -0.11285
MT2A metallothionein 2A -0.0870877
DSCAM Down syndrome cell adhesion molecule -0.0674783
RPL19 ribosomal protein L19 -0.0658375
RPS2 ribosomal protein S2 -0.0641801
HSPA8 heat shock 70kDa protein 8 -0.0626225
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0622361
BRD2 bromodomain containing 2 -0.0585325
FTL ferritin, light polypeptide -0.0581492
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0552353
WWOX WW domain containing oxidoreductase -0.0551204
USP34 ubiquitin specific peptidase 34 -0.0548874
TMSB10 thymosin beta 10 -0.0548044
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0544049
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0521195
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0515623
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0495095
CFLAR CASP8 and FADD-like apoptosis regulator -0.0467156
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0457811
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0455256
CMIP c-Maf inducing protein -0.0453948
ASPH aspartate beta-hydroxylase -0.044935
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0445954
EGR1 early growth response 1 -0.0440145
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0439373
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0429274
NIPBL Nipped-B homolog (Drosophila) -0.0425226
RBM39 RNA binding motif protein 39 -0.0415729
GLS2 glutaminase 2 (liver, mitochondrial) -0.041408
CENPF centromere protein F, 350/400kDa -0.0401734
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0393769
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0383866
AURKA aurora kinase A -0.0383292
ADAR adenosine deaminase, RNA-specific -0.0381537
KANSL1L KAT8 regulatory NSL complex subunit 1-like -0.0380711
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0377581
RPLP1 ribosomal protein, large, P1 -0.03672
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 -0.0365793
RTN4 reticulon 4 -0.0362145
CCT3 chaperonin containing TCP1, subunit 3 (gamma) -0.036158
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0354614
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0344194
ATP5F1B ATP synthase F1 subunit beta -0.0342278
LOC112694756 uncharaterized LOC112694756 -0.0332809
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0327352
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0327325
FNDC3B fibronectin type III domain containing 3B -0.0326812
RB1CC1 RB1-inducible coiled-coil 1 -0.0326058
MCL1 myeloid cell leukemia 1 -0.0323938
ATP11A ATPase, class VI, type 11A -0.0323863
TXNRD1 thioredoxin reductase 1 -0.0323838
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0323747
BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 -0.0316442
YBX1 Y box binding protein 1 -0.031526
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0314914
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0314362
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0313376
NCEH1 neutral cholesterol ester hydrolase 1 -0.0313036
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0308773
SERINC3 serine incorporator 3 -0.0308447
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.030576
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0299086
CENPE centromere protein E, 312kDa -0.0298559
RPL7 ribosomal protein L7 -0.0296045
ACIN1 apoptotic chromatin condensation inducer 1 -0.029529
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.029232
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0291208
PPP4R3A protein phosphatase 4 regulatory subunit 3A -0.0290849
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0286737
NCOA1 nuclear receptor coactivator 1 -0.0284385
RAB10 RAB10, member RAS oncogene family -0.0283874
MYH9 myosin, heavy chain 9, non-muscle -0.0283754
SMYD3 SET and MYND domain containing 3 -0.0279298
SAMD4A sterile alpha motif domain containing 4A -0.0278614
RCOR1 REST corepressor 1 -0.0278315
CBFB core-binding factor, beta subunit -0.0273997
BMP6 bone morphogenetic protein 6 -0.0273613
ATXN1 ataxin 1 -0.0270757
GOLGB1 golgin B1 -0.0270675
PHF3 PHD finger protein 3 -0.0270476
GPHN gephyrin -0.0270357
TASOR2 transcription activation suppressor family member 2 -0.0270134
SVIL supervillin -0.0269277
EXOC6B exocyst complex component 6B -0.026656
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0264266
BTG1 B-cell translocation gene 1, anti-proliferative -0.0261885
SGO2 shugoshin 2 -0.0259818
APP amyloid beta (A4) precursor protein -0.0259094
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma -0.025814
MBTPS1 membrane-bound transcription factor peptidase, site 1 -0.0257854
BUB1 BUB1 mitotic checkpoint serine/threonine kinase -0.0254223
GMDS GDP-mannose 4,6-dehydratase -0.0253001
PRPF3 pre-mRNA processing factor 3 -0.0252122
ANKRD17 ankyrin repeat domain 17 -0.0252077
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0251505
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0249838
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0248926