Cytarabine_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Cytarabine perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Cytarabine_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.143882
IGFBP3 insulin-like growth factor binding protein 3 0.13873
ELL2 elongation factor, RNA polymerase II, 2 0.138421
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.136621
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.13316
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.122709
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.117603
TSC22D2 TSC22 domain family, member 2 0.111502
UBA6 ubiquitin-like modifier activating enzyme 6 0.110135
CD44 CD44 molecule (Indian blood group) 0.108448
GRB10 growth factor receptor-bound protein 10 0.106772
CALU calumenin 0.0990414
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0988089
RICTOR RPTOR independent companion of MTOR, complex 2 0.0985669
SPAG9 sperm associated antigen 9 0.0935757
S100A10 S100 calcium binding protein A10 0.0911517
TXNRD1 thioredoxin reductase 1 0.0834596
GADD45B growth arrest and DNA-damage-inducible, beta 0.0823042
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0809415
MARCHF6 membrane associated ring-CH-type finger 6 0.0805998
ZFAND3 zinc finger, AN1-type domain 3 0.07821
DTNA dystrobrevin, alpha 0.0752979
OGA O-GlcNAcase 0.0750756
ANXA2 annexin A2 0.0712994
FNDC3B fibronectin type III domain containing 3B 0.0708981
KTN1 kinectin 1 (kinesin receptor) 0.0691748
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0691406
TOP1 topoisomerase (DNA) I 0.0686218
ACTN4 actinin, alpha 4 0.068447
TMSB10 thymosin beta 10 0.068215
ALCAM activated leukocyte cell adhesion molecule 0.0653017
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0642323
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0634152
SRPK2 SRSF protein kinase 2 0.0633472
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0613651
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0610031
NDRG1 N-myc downstream regulated 1 0.060675
SLTM SAFB-like, transcription modulator 0.0606503
PMEPA1 prostate transmembrane protein, androgen induced 1 0.057659
ANKRD11 ankyrin repeat domain 11 0.0576505
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0575392
NAMPT nicotinamide phosphoribosyltransferase 0.0551608
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0547785
TRA2A transformer 2 alpha homolog (Drosophila) 0.0545202
ATXN1 ataxin 1 0.0538104
KMT2E lysine (K)-specific methyltransferase 2E 0.0518359
ESYT2 extended synaptotagmin-like protein 2 0.051597
COG5 component of oligomeric golgi complex 5 0.0507457
ACTG1 actin gamma 1 0.0495729
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0489206
COL8A1 collagen, type VIII, alpha 1 0.0473938
FLNB filamin B, beta 0.0468676
BIRC6 baculoviral IAP repeat containing 6 0.0454522
AKAP12 A kinase (PRKA) anchor protein 12 0.0441282
FXR1 fragile X mental retardation, autosomal homolog 1 0.0437116
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.0431536
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0423327
SMAD3 SMAD family member 3 0.0413351
PDE10A phosphodiesterase 10A 0.0374621
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0368506
EZR ezrin 0.0367588
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0363836
COL5A2 collagen, type V, alpha 2 0.0360112
MED13L mediator complex subunit 13-like 0.0357479
NCOA3 nuclear receptor coactivator 3 0.0357461
RBM39 RNA binding motif protein 39 0.033127
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0331246
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0327424
PRKD3 protein kinase D3 0.0319066
STC1 stanniocalcin 1 0.0308701
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.029862
FN1 fibronectin 1 0.0289962
GPC6 glypican 6 0.028239
PICALM phosphatidylinositol binding clathrin assembly protein 0.0279428
NFIA nuclear factor I/A 0.0266321
MATR3 matrin 3 0.0242134
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0235725
MARCHF7 membrane associated ring-CH-type finger 7 0.0231568
HSPH1 heat shock 105kDa/110kDa protein 1 0.0200199
ANKRD17 ankyrin repeat domain 17 0.0198174
HDLBP high density lipoprotein binding protein 0.019282
OSBPL8 oxysterol binding protein-like 8 0.0182984
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0164315
ELOVL5 ELOVL fatty acid elongase 5 0.0162934
TCF12 transcription factor 12 0.0160445
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0158844
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0148532
ANKRD12 ankyrin repeat domain 12 0.0141119
GMDS GDP-mannose 4,6-dehydratase 0.0123067
EGFR epidermal growth factor receptor 0.0111
ELF2 E74-like factor 2 (ets domain transcription factor) 0.00879103
CERS6 ceramide synthase 6 0.00726029
PDLIM5 PDZ and LIM domain 5 0.00598014
USP34 ubiquitin specific peptidase 34 0.00540266
DOCK5 dedicator of cytokinesis 5 0.00517433
P4HB prolyl 4-hydroxylase, beta polypeptide 0.00472764
ARRDC3 arrestin domain containing 3 0.00359844
BBX bobby sox homolog (Drosophila) 0.00325843
CANX calnexin 0.00325499
AKAP9 A kinase (PRKA) anchor protein 9 0.00318225

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.212237
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.205128
PDE4D phosphodiesterase 4D, cAMP-specific -0.155297
TPT1 tumor protein, translationally-controlled 1 -0.153199
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.119916
JMJD1C jumonji domain containing 1C -0.108491
GOLGB1 golgin B1 -0.101228
RPS19 ribosomal protein S19 -0.0999056
EXT1 exostosin glycosyltransferase 1 -0.0990181
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0900321
RPS6 ribosomal protein S6 -0.0883797
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0864085
VCL vinculin -0.0846405
GOLGA4 golgin A4 -0.0803612
HMGA2 high mobility group AT-hook 2 -0.0793201
RORA RAR-related orphan receptor A -0.0792186
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0764448
PRKCA protein kinase C, alpha -0.0752061
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0705013
EEF2 eukaryotic translation elongation factor 2 -0.0681484
NAV2 neuron navigator 2 -0.0632274
CADM2 cell adhesion molecule 2 -0.0628792
LMO7 LIM domain 7 -0.06281
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0609767
ATP11A ATPase, class VI, type 11A -0.0606526
SLC38A2 solute carrier family 38, member 2 -0.0604435
FTL ferritin, light polypeptide -0.060374
AKAP13 A kinase (PRKA) anchor protein 13 -0.0599907
NBEAL1 neurobeachin-like 1 -0.059622
RBM25 RNA binding motif protein 25 -0.0586968
B2M beta-2-microglobulin -0.0578096
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0566314
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0566172
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D -0.0564882
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.054319
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0535362
KMT2C lysine (K)-specific methyltransferase 2C -0.051544
NALF1 NALCN channel auxiliary factor 1 -0.0511944
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0500289
FNIP1 folliculin interacting protein 1 -0.0498764
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.04914
CALR calreticulin -0.0488876
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0467312
MYO1E myosin IE -0.0464719
DSCAM Down syndrome cell adhesion molecule -0.0462179
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0455256
NKD1 naked cuticle homolog 1 (Drosophila) -0.043647
H3-3B H3.3 histone B -0.0432492
ZNF608 zinc finger protein 608 -0.0429917
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0420626
PKM pyruvate kinase, muscle -0.0414684
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0398985
MT2A metallothionein 2A -0.039419
TXNIP thioredoxin interacting protein -0.0394144
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0392296
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.039169
ZBTB20 zinc finger and BTB domain containing 20 -0.0376446
DOCK4 dedicator of cytokinesis 4 -0.0376223
SEC31A SEC31 homolog A (S. cerevisiae) -0.0348059
MORF4L2 mortality factor 4 like 2 -0.0344021
PTMA prothymosin, alpha -0.0334024
PEG10 paternally expressed 10 -0.0326695
IGF2 insulin-like growth factor 2 -0.0321261
RSL24D1 ribosomal L24 domain containing 1 -0.0319073
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0316662
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0311955
RPL35A ribosomal protein L35a -0.0308882
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0305616
PSD3 pleckstrin and Sec7 domain containing 3 -0.0301549
MED13 mediator complex subunit 13 -0.0293221
MYOF myoferlin -0.0290409
PUM2 pumilio RNA-binding family member 2 -0.0287358
DST dystonin -0.0284996
PTK2 protein tyrosine kinase 2 -0.0281235
SMYD3 SET and MYND domain containing 3 -0.0274286
TNS3 tensin 3 -0.027282
PGK1 phosphoglycerate kinase 1 -0.0263626
ASPH aspartate beta-hydroxylase -0.0262056
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0261108
PARD3 par-3 family cell polarity regulator -0.025971
LOC102724023 ES1 protein homolog, mitochondrial -0.0258771
RPLP1 ribosomal protein, large, P1 -0.0239507
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.023873
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0228909
AFDN afadin, adherens junction formation factor -0.0222519
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0219551
RAP1B RAP1B, member of RAS oncogene family -0.0210307
PRRC2C proline-rich coiled-coil 2C -0.0205619
TENM3 teneurin transmembrane protein 3 -0.0205132
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0204102
MACF1 microtubule-actin crosslinking factor 1 -0.0194865
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.019397
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0193923
FBXO11 F-box protein 11 -0.0182666
SYAP1 synapse associated protein 1 -0.0181531
SETD5 SET domain containing 5 -0.0171103
CUL3 cullin 3 -0.0169015
FAM13A family with sequence similarity 13, member A -0.0164281
DLG1 discs, large homolog 1 (Drosophila) -0.0151753
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0143285