D-423MG Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

63 genes with high or low copy number in D-423MG relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
EPHA1-AS1 EPHA1 antisense RNA 1 2.49065
CTAGE15 CTAGE family, member 15 2.49065
RPA3 replication protein A3, 14kDa 2.35236
MIOS missing oocyte, meiosis regulator, homolog (Drosophila) 2.35236
MIR26A2 microRNA 26a-2 2.3178
METTL21B methyltransferase like 21B 2.3178
GLCCI1 glucocorticoid induced 1 2.3178
CTDSP2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 2.3178
COL28A1 collagen, type XXVIII, alpha 1 2.3178
TSFM Ts translation elongation factor, mitochondrial 2.30944
CYP27B1 cytochrome P450, family 27, subfamily B, polypeptide 1 2.30944
MARCH9 membrane-associated ring finger (C3HC4) 9 2.30944
METTL1 methyltransferase like 1 2.30944
AVIL advillin 2.30944
ICA1 islet cell autoantigen 1, 69kDa 2.30944
SLC26A10 solute carrier family 26, member 10 2.283
AGAP2-AS1 AGAP2 antisense RNA 1 2.283
TSPAN31 tetraspanin 31 2.283
CDK4 cyclin-dependent kinase 4 2.283
AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 2.283
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 2.283
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 2.283
TCAF2 TRPM8 channel-associated factor 2 2.09431
LOC154761 family with sequence similarity 115, member C pseudogene 2.09431
CTAGE6 CTAGE family, member 6 2.09431
TCAF1 TRPM8 channel-associated factor 1 2.09117
R3HDM2 R3H domain containing 2 2.09073
MIR4300 microRNA 4300 2.09073
KIF5A kinesin family member 5A 2.07776
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 2.0731

low copy number

Symbol Name Standardized Value
ENO1 enolase 1, (alpha) -3.24687
H6PD hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) -3.24687
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33 -3.24687
ENO1-AS1 ENO1 antisense RNA 1 -3.24687
TNFRSF9 tumor necrosis factor receptor superfamily, member 9 -3.14331
ERRFI1 ERBB receptor feedback inhibitor 1 -3.14331
PARK7 parkinson protein 7 -3.14331
VAMP3 vesicle-associated membrane protein 3 -3.12964
CAMTA1 calmodulin binding transcription activator 1 -3.12964
FAM35DP family with sequence similarity 35, member A pseudogene -3.12964
PER3 period circadian clock 3 -3.12964
SLC45A1 solute carrier family 45, member 1 -3.12964
UTS2 urotensin 2 -3.12964
CA6 carbonic anhydrase VI -3.11641
SLC2A7 solute carrier family 2 (facilitated glucose transporter), member 7 -3.11641
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 -3.11641
SLC2A5 solute carrier family 2 (facilitated glucose/fructose transporter), member 5 -3.11641
MIR34A microRNA 34a -3.11641
GPR157 G protein-coupled receptor 157 -3.11641
PTPN20 protein tyrosine phosphatase, non-receptor type 20 -3.11641
HNRNPA1P33 heterogeneous nuclear ribonucleoprotein A1 pseudogene 33 -3.05881
FAM25C family with sequence similarity 25, member C -3.05881
NPY4R neuropeptide Y receptor Y4 -3.05881
AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 -3.05881
LINC00842 long intergenic non-protein coding RNA 842 -3.05881
BMS1P6 BMS1 ribosome biogenesis factor pseudogene 6 -3.05881
RERE arginine-glutamic acid dipeptide (RE) repeats -3.03592
GLUD1P7 glutamate dehydrogenase 1 pseudogene 7 -3.03082
SYT15 synaptotagmin XV -3.03082
ANXA8 annexin A8 -3.00044
GPRIN2 G protein regulated inducer of neurite outgrowth 2 -2.99615
FAM35BP family with sequence similarity 35, member A pseudogene -2.9644
BTNL3 butyrophilin-like 3 -2.72661