D-542MG Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
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Genes

38 genes with high or low copy number in D-542MG relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
CSMD1 CUB and Sushi multiple domains 1 2.15766

low copy number

Symbol Name Standardized Value
LOC284661 uncharacterized LOC284661 -3.83684
MIR1233-2 microRNA 1233-2 -3.49112
GOLGA8B golgin A8 family, member B -3.46838
OR4C12 olfactory receptor, family 4, subfamily C, member 12 -3.36169
LOC440040 glutamate receptor, metabotropic 5 pseudogene -3.36169
OR4C13 olfactory receptor, family 4, subfamily C, member 13 -3.36169
TRIM64C tripartite motif containing 64C -3.32901
TRIM49B tripartite motif containing 49B -3.32901
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1 -3.32901
OR4B1 olfactory receptor, family 4, subfamily B, member 1 -3.2703
OR4C45 olfactory receptor, family 4, subfamily C, member 45 -3.2703
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene) -3.2703
OR4S1 olfactory receptor, family 4, subfamily S, member 1 -3.2703
OR4C3 olfactory receptor, family 4, subfamily C, member 3 -3.2703
PTPRJ protein tyrosine phosphatase, receptor type, J -3.2703
OR4A47 olfactory receptor, family 4, subfamily A, member 47 -3.2703
OR4X1 olfactory receptor, family 4, subfamily X, member 1 (gene/pseudogene) -3.2703
MCHR2 melanin-concentrating hormone receptor 2 -3.24687
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene -3.14331
SMIM1 small integral membrane protein 1 (Vel blood group) -3.05196
TP73-AS1 TP73 antisense RNA 1 -3.05196
CEP104 centrosomal protein 104kDa -3.05196
CCDC27 coiled-coil domain containing 27 -3.05196
C1ORF174 chromosome 1 open reading frame 174 -3.05196
LRRC47 leucine rich repeat containing 47 -3.05196
DFFB DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) -3.05196
LOC441601 septin 7 pseudogene -3.04095
TP73 tumor protein p73 -2.99615
CHEK2P2 checkpoint kinase 2 pseudogene 2 -2.89586
HERC2P7 hect domain and RLD 2 pseudogene 7 -2.86179
GOLGA8CP golgin A8 family, member C, pseudogene -2.86179
GOLGA6L6 golgin A6 family-like 6 -2.86179
POTEB POTE ankyrin domain family, member B -2.8542
NF1P2 neurofibromin 1 pseudogene 2 -2.8542
NBEAP1 neurobeachin pseudogene 1 -2.8542
HERC2P3 hect domain and RLD 2 pseudogene 3 -2.84875
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3 -2.80776