DNA-binding transcription factor binding Gene Set

Dataset GO Molecular Function Annotations 2025
Category structural or functional annotations
Type molecular function
External Link http://amigo.geneontology.org/amigo/term/GO:0140297
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Genes

295 genes performing the DNA-binding transcription factor binding molecular function from the curated GO Molecular Function Annotations 2025 dataset.

Symbol Name
ADD1 adducin 1 (alpha)
AHR aryl hydrocarbon receptor
ANKRD1 ankyrin repeat domain 1 (cardiac muscle)
ANKRD2 ankyrin repeat domain 2 (stretch responsive muscle)
AREG amphiregulin
ARTN artemin
ASCL1 achaete-scute family bHLH transcription factor 1
ATF4 activating transcription factor 4
BBS1 Bardet-Biedl syndrome 1
BBS10 Bardet-Biedl syndrome 10
BBS2 Bardet-Biedl syndrome 2
BBS4 Bardet-Biedl syndrome 4
BBS5 Bardet-Biedl syndrome 5
BBS7 Bardet-Biedl syndrome 7
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BCL2 B-cell CLL/lymphoma 2
BCL3 B-cell CLL/lymphoma 3
BCL6 B-cell CLL/lymphoma 6
BCOR BCL6 corepressor
BEX2 brain expressed X-linked 2
BHLHE40 basic helix-loop-helix family, member e40
BHLHE41 basic helix-loop-helix family, member e41
BMAL1 basic helix-loop-helix ARNT like 1
CARM1 coactivator-associated arginine methyltransferase 1
CBX5 chromobox homolog 5
CCNT1 cyclin T1
CD34 CD34 molecule
CDKN2A cyclin-dependent kinase inhibitor 2A
CEBPA CCAAT/enhancer binding protein (C/EBP), alpha
CEBPG CCAAT/enhancer binding protein (C/EBP), gamma
CENPF centromere protein F, 350/400kDa
CGGBP1 CGG triplet repeat binding protein 1
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2
CHD4 chromodomain helicase DNA binding protein 4
CIITA class II, major histocompatibility complex, transactivator
CNOT7 CCR4-NOT transcription complex, subunit 7
CREB1 cAMP responsive element binding protein 1
CREB3L4 cAMP responsive element binding protein 3-like 4
CREBBP CREB binding protein
CREM cAMP responsive element modulator
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CRTC1 CREB regulated transcription coactivator 1
CRTC2 CREB regulated transcription coactivator 2
CRTC3 CREB regulated transcription coactivator 3
CRX cone-rod homeobox
CSNK2B casein kinase 2, beta polypeptide
CTBP1 C-terminal binding protein 1
CTBP2 C-terminal binding protein 2
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXXC5 CXXC finger protein 5
DACT1 dishevelled-binding antagonist of beta-catenin 1
DAND5 DAN domain family member 5, BMP antagonist
DAPK3 death-associated protein kinase 3
DAXX death-domain associated protein
DAZAP2 DAZ associated protein 2
DDIT3 DNA-damage-inducible transcript 3
DDRGK1 DDRGK domain containing 1
DDX20 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
DGKQ diacylglycerol kinase, theta 110kDa
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9
DMAP1 DNA methyltransferase 1 associated protein 1
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DOT1L DOT1-like histone H3K79 methyltransferase
DUSP28 dual specificity phosphatase 28
E2F1 E2F transcription factor 1
E4F1 E4F transcription factor 1
EBF4 early B-cell factor 4
EEF1D eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
EGR2 early growth response 2
EIF4E eukaryotic translation initiation factor 4E
EOMES eomesodermin
EP300 E1A binding protein p300
EPAS1 endothelial PAS domain protein 1
ESRRB estrogen-related receptor beta
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
FBP1 fructose-1,6-bisphosphatase 1
FHL2 four and a half LIM domains 2
FIGLA folliculogenesis specific basic helix-loop-helix
FIZ1 FLT3-interacting zinc finger 1
FLNA filamin A, alpha
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXC1 forkhead box C1
FOXH1 forkhead box H1
FOXO4 forkhead box O4
GATA1 GATA binding protein 1 (globin transcription factor 1)
GATA2 GATA binding protein 2
GATA3 GATA binding protein 3
GATA4 GATA binding protein 4
GATA6 GATA binding protein 6
GDNF glial cell derived neurotrophic factor
GFI1B growth factor independent 1B transcription repressor
GRHL1 grainyhead-like 1 (Drosophila)
GRHL2 grainyhead-like 2 (Drosophila)
GSC goosecoid homeobox
GSK3B glycogen synthase kinase 3 beta
GTF2B general transcription factor IIB
GTF2I general transcription factor IIi
HAND1 heart and neural crest derivatives expressed 1
HAND2 heart and neural crest derivatives expressed 2
HCFC1 host cell factor C1
HCLS1 hematopoietic cell-specific Lyn substrate 1
HDAC1 histone deacetylase 1
HDAC11 histone deacetylase 11
HDAC2 histone deacetylase 2
HDAC3 histone deacetylase 3
HDAC4 histone deacetylase 4
HDAC5 histone deacetylase 5
HDAC7 histone deacetylase 7
HDAC8 histone deacetylase 8
HDAC9 histone deacetylase 9
HES6 hes family bHLH transcription factor 6
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HHEX hematopoietically expressed homeobox
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
HIPK2 homeodomain interacting protein kinase 2
HIRA histone cell cycle regulator
HMGA2 high mobility group AT-hook 2
HMGB1 high mobility group box 1
HNF1A HNF1 homeobox A
HOXA7 homeobox A7
HOXC13 homeobox C13
HSPB1 heat shock 27kDa protein 1
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IFI27 interferon, alpha-inducible protein 27
ISL1 ISL LIM homeobox 1
JUN jun proto-oncogene
KAT2A K(lysine) acetyltransferase 2A
KAT2B K(lysine) acetyltransferase 2B
KAT5 K(lysine) acetyltransferase 5
KAT6A K(lysine) acetyltransferase 6A
KAT8 K(lysine) acetyltransferase 8
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8
KDM1A lysine (K)-specific demethylase 1A
KEAP1 kelch-like ECH-associated protein 1
KLF4 Kruppel-like factor 4 (gut)
LDB2 LIM domain binding 2
LHX3 LIM homeobox 3
LMO1 LIM domain only 1 (rhombotin 1)
LMO2 LIM domain only 2 (rhombotin-like 1)
LMO3 LIM domain only 3 (rhombotin-like 2)
LMO4 LIM domain only 4
LOC102724023 ES1 protein homolog, mitochondrial
LOC102724428 serine/threonine-protein kinase SIK1
LYAR Ly1 antibody reactive
MAD2L2 MAD2 mitotic arrest deficient-like 2 (yeast)
MAGEA2 melanoma antigen family A2
MAP3K10 mitogen-activated protein kinase kinase kinase 10
MAPK3 mitogen-activated protein kinase 3
MAX MYC associated factor X
MBD4 methyl-CpG binding domain protein 4
MDFIC MyoD family inhibitor domain containing
MEF2A myocyte enhancer factor 2A
MEF2C myocyte enhancer factor 2C
MEF2D myocyte enhancer factor 2D
METTL23 methyltransferase like 23
MIA3 melanoma inhibitory activity family, member 3
MIXL1 Mix paired-like homeobox
MKKS McKusick-Kaufman syndrome
MLXIPL MLX interacting protein-like
MTA1 metastasis associated 1
MTA2 metastasis associated 1 family, member 2
MTDH metadherin
MYC v-myc avian myelocytomatosis viral oncogene homolog
MYOCD myocardin
MYOD1 myogenic differentiation 1
NAAA N-acylethanolamine acid amidase
NCOR1 nuclear receptor corepressor 1
NEK6 NIMA-related kinase 6
NEUROD1 neuronal differentiation 1
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFE2L2 nuclear factor, erythroid 2-like 2
NFIA nuclear factor I/A
NFYB nuclear transcription factor Y, beta
NHLH2 nescient helix loop helix 2
NIF3L1 NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
NKX2-1 NK2 homeobox 1
NKX2-5 NK2 homeobox 5
NKX3-1 NK3 homeobox 1
NLK nemo-like kinase
NLRP3 NLR family, pyrin domain containing 3
NOC2L nucleolar complex associated 2 homolog (S. cerevisiae)
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR0B1 nuclear receptor subfamily 0, group B, member 1
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1
PARK7 parkinson protein 7
PARP1 poly (ADP-ribose) polymerase 1
PARP10 poly (ADP-ribose) polymerase family, member 10
PASD1 PAS domain containing 1
PBX1 pre-B-cell leukemia homeobox 1
PBX2 pre-B-cell leukemia homeobox 2
PBXIP1 pre-B-cell leukemia homeobox interacting protein 1
PIAS2 protein inhibitor of activated STAT, 2
PITX1 paired-like homeodomain 1
PITX2 paired-like homeodomain 2
POU1F1 POU class 1 homeobox 1
POU5F1 POU class 5 homeobox 1
PPARA peroxisome proliferator-activated receptor alpha
PPARG peroxisome proliferator-activated receptor gamma
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
PRDM16 PR domain containing 16
PRDM5 PR domain containing 5
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRRX1 paired related homeobox 1
PSIP1 PC4 and SFRS1 interacting protein 1
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5
PSMD10 proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
PSMD9 proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
PTMA prothymosin, alpha
PURA purine-rich element binding protein A
PURB purine-rich element binding protein B
RB1 retinoblastoma 1
RBBP8 retinoblastoma binding protein 8
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2
RBM15 RNA binding motif protein 15
RBPJ recombination signal binding protein for immunoglobulin kappa J region
RBX1 ring-box 1, E3 ubiquitin protein ligase
RELA v-rel avian reticuloendotheliosis viral oncogene homolog A
REST RE1-silencing transcription factor
RPS3 ribosomal protein S3
RUNX1 runt-related transcription factor 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
SCX scleraxis basic helix-loop-helix transcription factor
SDR16C5 short chain dehydrogenase/reductase family 16C, member 5
SETD1A SET domain containing 1A
SIN3A SIN3 transcription regulator family member A
SIRT1 sirtuin 1
SIRT2 sirtuin 2
SKI SKI proto-oncogene
SMAD2 SMAD family member 2
SMAD3 SMAD family member 3
SMARCA1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SOST sclerostin
SOX17 SRY (sex determining region Y)-box 17
SP100 SP100 nuclear antigen
SP3 Sp3 transcription factor
SPI1 Spi-1 proto-oncogene
SRF serum response factor (c-fos serum response element-binding transcription factor)
SRI sorcin
SRY sex determining region Y
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STAT5A signal transducer and activator of transcription 5A
STING1 stimulator of interferon response cGAMP interactor 1
STK4 serine/threonine kinase 4
TAF1 TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa
TAF12 TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
TAF7 TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
TAL1 T-cell acute lymphocytic leukemia 1
TBK1 TANK-binding kinase 1
TBP TATA box binding protein
TBX20 T-box 20
TBX3 T-box 3
TBX5 T-box 5
TBX6 T-box 6
TBXT T-box transcription factor T
TCERG1 transcription elongation regulator 1
TCF12 transcription factor 12
TCF21 transcription factor 21
TCF23 transcription factor 23
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box)
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TCP10L t-complex 10-like
TEAD3 TEA domain family member 3
TFDP1 transcription factor Dp-1
TFDP3 transcription factor Dp family, member 3
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TP53 tumor protein p53
TP53BP1 tumor protein p53 binding protein 1
TP73 tumor protein p73
TRIB1 tribbles pseudokinase 1
TRIB2 tribbles pseudokinase 2
TTC8 tetratricopeptide repeat domain 8
TWIST1 twist family bHLH transcription factor 1
TXLNG taxilin gamma
UBXN7 UBX domain protein 7
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
USF1 upstream transcription factor 1
USF2 upstream transcription factor 2, c-fos interacting
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
WWP2 WW domain containing E3 ubiquitin protein ligase 2
YAP1 Yes-associated protein 1
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
YY1 YY1 transcription factor
ZBTB17 zinc finger and BTB domain containing 17
ZBTB49 zinc finger and BTB domain containing 49
ZBTB7A zinc finger and BTB domain containing 7A
ZBTB8A zinc finger and BTB domain containing 8A
ZFPM1 zinc finger protein, FOG family member 1
ZFPM2 zinc finger protein, FOG family member 2
ZMYND8 zinc finger, MYND-type containing 8
ZNF653 zinc finger protein 653