DT-061_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DT-061 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DT-061_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 0.23099
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.210419
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.180685
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.119484
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.119104
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.101968
RAB7A RAB7A, member RAS oncogene family 0.0925204
RRM2 ribonucleotide reductase M2 0.0911903
ADIPOR2 adiponectin receptor 2 0.0798431
VMP1 vacuole membrane protein 1 0.0743239
ZSWIM6 zinc finger, SWIM-type containing 6 0.0690126
TPI1 triosephosphate isomerase 1 0.0685472
RPS12 ribosomal protein S12 0.0645546
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.057136
HMGA2 high mobility group AT-hook 2 0.0558223
TPM3 tropomyosin 3 0.053329
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0517393
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0515335
ERRFI1 ERBB receptor feedback inhibitor 1 0.0512975
DST dystonin 0.0506164
HDAC9 histone deacetylase 9 0.0478241
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0477048
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0466475
EXOC4 exocyst complex component 4 0.0453748
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0451782
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0446418
RAD51B RAD51 paralog B 0.0437698
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0434016
CCSER1 coiled-coil serine-rich protein 1 0.0432822
LOC102724023 ES1 protein homolog, mitochondrial 0.0419347
TAS2R14 taste receptor, type 2, member 14 0.040932
LDHA lactate dehydrogenase A 0.0390293
FNIP1 folliculin interacting protein 1 0.0389193
TBC1D5 TBC1 domain family, member 5 0.0384653
LPP LIM domain containing preferred translocation partner in lipoma 0.0383154
TUBA1B tubulin, alpha 1b 0.0380896
MED13L mediator complex subunit 13-like 0.0368547
YAP1 Yes-associated protein 1 0.0365648
CCND1 cyclin D1 0.0361924
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0361279
BRD2 bromodomain containing 2 0.0354063
TENM3 teneurin transmembrane protein 3 0.0353307
PCLO piccolo presynaptic cytomatrix protein 0.0349989
RPL3 ribosomal protein L3 0.0347827
ASXL2 additional sex combs like transcriptional regulator 2 0.0347755
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0346837
CDK6 cyclin-dependent kinase 6 0.0339501
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0337304
SETD5 SET domain containing 5 0.0335447
SPATS2 spermatogenesis associated, serine-rich 2 0.0333567
HSPA8 heat shock 70kDa protein 8 0.0332539
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0330505
GPBP1 GC-rich promoter binding protein 1 0.0317927
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0317084
EXOC6B exocyst complex component 6B 0.0315681
FTL ferritin, light polypeptide 0.0308688
PRDX1 peroxiredoxin 1 0.0308031
PCDH9 protocadherin 9 0.0307078
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0306923
LRMDA leucine rich melanocyte differentiation associated 0.0303108
TRIO trio Rho guanine nucleotide exchange factor 0.0303
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0300495
CSNK1A1 casein kinase 1, alpha 1 0.0300214
MKI67 marker of proliferation Ki-67 0.028946
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0285626
RLF rearranged L-myc fusion 0.0283923
INTS4 integrator complex subunit 4 0.0281137
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.0278989
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0278899
INTS6 integrator complex subunit 6 0.0278442
GSK3B glycogen synthase kinase 3 beta 0.0276833
SQSTM1 sequestosome 1 0.0275973
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0272906
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0270167
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0269856
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0268484
USP34 ubiquitin specific peptidase 34 0.0267593
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0266699
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0265841
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0263054
EFNA5 ephrin-A5 0.0260095
RPL4 ribosomal protein L4 0.0257888
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0257707
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0255954
JMJD1C jumonji domain containing 1C 0.0254646
CLTC clathrin, heavy chain (Hc) 0.0254003
NOP58 NOP58 ribonucleoprotein 0.0253889
YBX1 Y box binding protein 1 0.0253246
ZFAND3 zinc finger, AN1-type domain 3 0.0251267
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0251039
BABAM2 BRISC and BRCA1 A complex member 2 0.0249012
EXT1 exostosin glycosyltransferase 1 0.0247538
RTN4 reticulon 4 0.0246299
RAB1A RAB1A, member RAS oncogene family 0.0245823
AGO3 argonaute RISC catalytic component 3 0.0245057
EIF5 eukaryotic translation initiation factor 5 0.0241887
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0240227
ERBIN erbb2 interacting protein 0.024013
GOLGB1 golgin B1 0.0239259
RPS3 ribosomal protein S3 0.0238646

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.154667
AREG amphiregulin -0.103799
TMSB10 thymosin beta 10 -0.100042
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0982799
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.092921
PTMA prothymosin, alpha -0.0792
NAP1L1 nucleosome assembly protein 1-like 1 -0.0583272
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0562727
CLDN1 claudin 1 -0.0544876
MGAT4C MGAT4 family, member C -0.0514904
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0514749
AHNAK AHNAK nucleoprotein -0.0499141
EEF2 eukaryotic translation elongation factor 2 -0.0494022
NHSL1 NHS-like 1 -0.0486501
PDE4D phosphodiesterase 4D, cAMP-specific -0.0476996
RPL35A ribosomal protein L35a -0.0463554
MYL12B myosin, light chain 12B, regulatory -0.0435276
ZNF217 zinc finger protein 217 -0.0429177
TMEM123 transmembrane protein 123 -0.042293
RPL23 ribosomal protein L23 -0.0396929
CANX calnexin -0.0393109
GNAS GNAS complex locus -0.0376632
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0375009
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0368675
RPS27A ribosomal protein S27a -0.0367847
ANKRD12 ankyrin repeat domain 12 -0.0366256
PCBP2 poly(rC) binding protein 2 -0.036372
BCHE butyrylcholinesterase -0.0359375
HMGA1 high mobility group AT-hook 1 -0.0356826
ATP5F1B ATP synthase F1 subunit beta -0.0351829
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0329546
ADGRG6 adhesion G protein-coupled receptor G6 -0.0325755
WDR45B WD repeat domain 45B -0.0321422
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0318445
ZNF804A zinc finger protein 804A -0.0312493
UBC ubiquitin C -0.0305967
DLC1 DLC1 Rho GTPase activating protein -0.0297619
GCG glucagon -0.0286767
YBX3 Y box binding protein 3 -0.027728
KLF6 Kruppel-like factor 6 -0.0273842
FGF20 fibroblast growth factor 20 -0.0272441
BIRC3 baculoviral IAP repeat containing 3 -0.0264795
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0262768
CXADR coxsackie virus and adenovirus receptor -0.0260507
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0256992
GARS1 glycyl-tRNA synthetase 1 -0.0252537
KDM3A lysine (K)-specific demethylase 3A -0.0252348
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0251854
LMAN1 lectin, mannose-binding, 1 -0.0251646
IFIH1 interferon induced with helicase C domain 1 -0.024768
VCL vinculin -0.0246683
SLC38A2 solute carrier family 38, member 2 -0.0244001
FGFR1 fibroblast growth factor receptor 1 -0.0240291
KPNB1 karyopherin (importin) beta 1 -0.0239242
PDIA5 protein disulfide isomerase family A, member 5 -0.023076
RPS24 ribosomal protein S24 -0.0229769
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0229683
STAG2 stromal antigen 2 -0.0227626
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0227459
PCNP PEST proteolytic signal containing nuclear protein -0.0224144
CELF1 CUGBP, Elav-like family member 1 -0.0222438
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.022221
MARCHF6 membrane associated ring-CH-type finger 6 -0.0220128
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0219543
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 -0.0215065
HMGB1 high mobility group box 1 -0.0213367
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0210493
CAVIN1 caveolae associated protein 1 -0.0209216
BTG3 BTG family, member 3 -0.0208482
CCNI cyclin I -0.0206051
SLC38A1 solute carrier family 38, member 1 -0.0203067
GNL3 guanine nucleotide binding protein-like 3 (nucleolar) -0.0202961
LDHB lactate dehydrogenase B -0.0202649
LOC112694756 uncharaterized LOC112694756 -0.0201142
ARHGAP12 Rho GTPase activating protein 12 -0.020102
TM4SF1 transmembrane 4 L six family member 1 -0.0199367
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0197074
DRAP1 DR1-associated protein 1 (negative cofactor 2 alpha) -0.0196709
FBXO11 F-box protein 11 -0.0194522
BIRC6 baculoviral IAP repeat containing 6 -0.018949
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0183737
CHD4 chromodomain helicase DNA binding protein 4 -0.0182719
UBE2K ubiquitin-conjugating enzyme E2K -0.0180776
NCEH1 neutral cholesterol ester hydrolase 1 -0.0177679
PDIA3 protein disulfide isomerase family A, member 3 -0.0177368
WWTR1 WW domain containing transcription regulator 1 -0.017553
ZFAND6 zinc finger, AN1-type domain 6 -0.0173948
RPLP1 ribosomal protein, large, P1 -0.0171005
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0169841
RASA2 RAS p21 protein activator 2 -0.016885
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0167755
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0167213
S100A6 S100 calcium binding protein A6 -0.0167162
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0166724
RYK receptor-like tyrosine kinase -0.0166031
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -0.0165476
NDFIP1 Nedd4 family interacting protein 1 -0.0165296
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -0.0163852
SCAMP1 secretory carrier membrane protein 1 -0.016298
KIF5B kinesin family member 5B -0.0160178