DT-061_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DT-061 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DT-061_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ERRFI1 ERBB receptor feedback inhibitor 1 0.291276
AKAP12 A kinase (PRKA) anchor protein 12 0.194279
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.189589
SVIL supervillin 0.146864
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.117489
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.116717
IGFBP1 insulin-like growth factor binding protein 1 0.108502
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0988702
SAMD4A sterile alpha motif domain containing 4A 0.0865979
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0824323
DSPP dentin sialophosphoprotein 0.0817756
CCL20 chemokine (C-C motif) ligand 20 0.0812531
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0787586
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0774038
FAM107B family with sequence similarity 107, member B 0.0768309
ENO1 enolase 1, (alpha) 0.0707379
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.068955
TIMP1 TIMP metallopeptidase inhibitor 1 0.068492
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0635962
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0614236
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0590078
RPL4 ribosomal protein L4 0.0580625
JMJD1C jumonji domain containing 1C 0.0569582
PAWR PRKC, apoptosis, WT1, regulator 0.0548799
PDLIM5 PDZ and LIM domain 5 0.0543597
FOXP1 forkhead box P1 0.0529648
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0523367
KYNU kynureninase 0.0517905
RPS8 ribosomal protein S8 0.0515805
RPL3 ribosomal protein L3 0.051574
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0514687
TXNRD1 thioredoxin reductase 1 0.051021
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0491457
CRY1 cryptochrome circadian clock 1 0.0486031
RAB1A RAB1A, member RAS oncogene family 0.0477079
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0476512
SIK3 SIK family kinase 3 0.046971
MBNL2 muscleblind-like splicing regulator 2 0.0440073
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0437563
APLP2 amyloid beta (A4) precursor-like protein 2 0.0428731
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0422351
PSME4 proteasome (prosome, macropain) activator subunit 4 0.042085
MACF1 microtubule-actin crosslinking factor 1 0.0417531
DSTN destrin (actin depolymerizing factor) 0.0409642
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.040606
USP47 ubiquitin specific peptidase 47 0.0405088
EXT1 exostosin glycosyltransferase 1 0.0404029
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0395846
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0391516
EIF1 eukaryotic translation initiation factor 1 0.0386108
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.038405
MT2A metallothionein 2A 0.0383044
ASPH aspartate beta-hydroxylase 0.0372841
FAT1 FAT atypical cadherin 1 0.0370906
OSBPL8 oxysterol binding protein-like 8 0.0368565
NRIP1 nuclear receptor interacting protein 1 0.0368252
STAU1 staufen double-stranded RNA binding protein 1 0.0361644
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.036157
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0360179
UBC ubiquitin C 0.0353955
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0353942
JAK1 Janus kinase 1 0.0352487
GRB10 growth factor receptor-bound protein 10 0.0352393
DIAPH1 diaphanous-related formin 1 0.035228
ZFAND3 zinc finger, AN1-type domain 3 0.0351259
LPP LIM domain containing preferred translocation partner in lipoma 0.0347482
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0347437
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.0346666
ITGAV integrin, alpha V 0.0346263
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0340605
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 0.0340468
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0336996
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0336573
AHSG alpha-2-HS-glycoprotein 0.0335916
ZEB1 zinc finger E-box binding homeobox 1 0.0335068
RPS6 ribosomal protein S6 0.0331524
GOLGA4 golgin A4 0.0329885
SSR1 signal sequence receptor, alpha 0.0329371
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0328357
LMO7 LIM domain 7 0.0326957
RTN4 reticulon 4 0.0323105
WAC WW domain containing adaptor with coiled-coil 0.032196
PEAK1 pseudopodium-enriched atypical kinase 1 0.0321548
KIF1B kinesin family member 1B 0.0318444
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0317006
LIMS1 LIM and senescent cell antigen-like domains 1 0.0316819
YME1L1 YME1-like 1 ATPase 0.0315853
PPARD peroxisome proliferator-activated receptor delta 0.0315463
SPAG9 sperm associated antigen 9 0.0312883
RPL5 ribosomal protein L5 0.0307326
CLIC4 chloride intracellular channel 4 0.0304081
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0303495
RPS12 ribosomal protein S12 0.0301056
FAM13A family with sequence similarity 13, member A 0.0300503
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0295873
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.029479
AFF1 AF4/FMR2 family, member 1 0.0294462
MAP2K1 mitogen-activated protein kinase kinase 1 0.0291811
TOP1 topoisomerase (DNA) I 0.0290794
GCLC glutamate-cysteine ligase, catalytic subunit 0.0290749

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.159203
FN1 fibronectin 1 -0.134337
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.124949
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0861878
LRMDA leucine rich melanocyte differentiation associated -0.0772207
NPAS2 neuronal PAS domain protein 2 -0.0663053
C3 complement component 3 -0.0639456
RNF213 ring finger protein 213 -0.0589597
GPC6 glypican 6 -0.0536602
APOA2 apolipoprotein A-II -0.0524038
EML4 echinoderm microtubule associated protein like 4 -0.0517086
CP ceruloplasmin (ferroxidase) -0.0489073
NKD1 naked cuticle homolog 1 (Drosophila) -0.0411326
SLC38A2 solute carrier family 38, member 2 -0.0410272
MAML2 mastermind-like 2 (Drosophila) -0.0393711
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0375213
GNAS GNAS complex locus -0.0354378
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.033451
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0320553
TMEM123 transmembrane protein 123 -0.0318415
PTPRM protein tyrosine phosphatase, receptor type, M -0.0303315
MSI2 musashi RNA-binding protein 2 -0.0291419
EGR1 early growth response 1 -0.0286281
PEG3 paternally expressed 3 -0.0282573
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0276912
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0250422
PTCHD4 patched domain containing 4 -0.0248078
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide -0.0245178
NDRG1 N-myc downstream regulated 1 -0.0244834
RBM39 RNA binding motif protein 39 -0.0238026
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0235694
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0232641
SOX5 SRY (sex determining region Y)-box 5 -0.023122
ITGA1 integrin, alpha 1 -0.0221123
CHD6 chromodomain helicase DNA binding protein 6 -0.0214163
ATP10A ATPase, class V, type 10A -0.0213525
TMEM51 transmembrane protein 51 -0.0204405
PTPRF protein tyrosine phosphatase, receptor type, F -0.0200856
RPL35A ribosomal protein L35a -0.0200513
GMDS GDP-mannose 4,6-dehydratase -0.0195135
SCARB1 scavenger receptor class B, member 1 -0.0188562
COL7A1 collagen, type VII, alpha 1 -0.0187481
CMIP c-Maf inducing protein -0.0183288
FOXN3 forkhead box N3 -0.0183271
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0182211
APOE apolipoprotein E -0.0179974
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0177244
LYZ lysozyme -0.0176821
COL27A1 collagen, type XXVII, alpha 1 -0.0176742
MBNL3 muscleblind-like splicing regulator 3 -0.0175486
SCN9A sodium channel, voltage gated, type IX alpha subunit -0.0175116
MATN3 matrilin 3 -0.0174536
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 -0.0172619
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 -0.0171307
WSB1 WD repeat and SOCS box containing 1 -0.0170982
CYB5R3 cytochrome b5 reductase 3 -0.0169934
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0169761
RIGI RNA sensor RIG-I -0.0169171
CALD1 caldesmon 1 -0.0168866
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0168345
CST3 cystatin C -0.0167947
NFIA nuclear factor I/A -0.0167153
A2M alpha-2-macroglobulin -0.0166851
TMEM45B transmembrane protein 45B -0.0166845
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0166382
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0165675
ZFHX3 zinc finger homeobox 3 -0.0164264
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0161726
GPC3 glypican 3 -0.0161449
LPCAT1 lysophosphatidylcholine acyltransferase 1 -0.0160781
TTC28 tetratricopeptide repeat domain 28 -0.0159983
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0159179
APOC1 apolipoprotein C-I -0.0158361
CTSD cathepsin D -0.0153975
FKTN fukutin -0.0150832
ZMYND8 zinc finger, MYND-type containing 8 -0.0148781
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0148356
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0148225
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0147357
TCF25 transcription factor 25 (basic helix-loop-helix) -0.0147327
KIZ kizuna centrosomal protein -0.0147261
ARHGAP12 Rho GTPase activating protein 12 -0.0146512
RRBP1 ribosome binding protein 1 -0.0146033
CXXC5 CXXC finger protein 5 -0.0144444
DNAH17 dynein, axonemal, heavy chain 17 -0.0143853
TPT1 tumor protein, translationally-controlled 1 -0.0139916
PEG10 paternally expressed 10 -0.0139787
NHSL1 NHS-like 1 -0.013829
TGFBI transforming growth factor, beta-induced, 68kDa -0.0136976
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0136496
MX2 MX dynamin-like GTPase 2 -0.0136107
GSE1 Gse1 coiled-coil protein -0.0135477
IQSEC1 IQ motif and Sec7 domain 1 -0.0133967
SLC22A23 solute carrier family 22, member 23 -0.0130455
MTUS1 microtubule associated tumor suppressor 1 -0.013043
ARID3A AT rich interactive domain 3A (BRIGHT-like) -0.0129957
NREP neuronal regeneration related protein -0.012994
NOL4L nucleolar protein 4-like -0.0128953
AGXT alanine-glyoxylate aminotransferase -0.012716
HMGA1 high mobility group AT-hook 1 -0.0127159