DT-061_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DT-061 perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DT-061_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.203786
ERRFI1 ERBB receptor feedback inhibitor 1 0.0899441
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0809961
RAB7A RAB7A, member RAS oncogene family 0.0579636
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0528643
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0495893
THSD4 thrombospondin, type I, domain containing 4 0.0467056
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0452899
EXT1 exostosin glycosyltransferase 1 0.0441205
EXOC4 exocyst complex component 4 0.0425458
INTS6 integrator complex subunit 6 0.0380107
ZSWIM6 zinc finger, SWIM-type containing 6 0.0371874
RRM2 ribonucleotide reductase M2 0.0370824
HOMER1 homer scaffolding protein 1 0.036823
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0360784
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0357701
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0357348
JMJD1C jumonji domain containing 1C 0.0336403
DOCK5 dedicator of cytokinesis 5 0.03361
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0335131
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0334773
HSPA8 heat shock 70kDa protein 8 0.0327576
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 0.0318906
ZCCHC7 zinc finger, CCHC domain containing 7 0.0306014
PDLIM5 PDZ and LIM domain 5 0.0303979
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0301524
RPL4 ribosomal protein L4 0.0296034
FAF1 Fas (TNFRSF6) associated factor 1 0.0294869
NABP1 nucleic acid binding protein 1 0.0282754
PRKCE protein kinase C, epsilon 0.0281001
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0274276
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0274264
RCOR1 REST corepressor 1 0.0271556
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0266262
TPM3 tropomyosin 3 0.0261975
FMNL2 formin-like 2 0.0257967
RAD51B RAD51 paralog B 0.025714
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0256713
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0252119
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0248263
ANO6 anoctamin 6 0.0247249
SIK3 SIK family kinase 3 0.0245622
ELL2 elongation factor, RNA polymerase II, 2 0.0241963
DCAF8 DDB1 and CUL4 associated factor 8 0.0239952
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0238223
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0236508
E2F3 E2F transcription factor 3 0.0234887
CRY1 cryptochrome circadian clock 1 0.0228396
WNT2B wingless-type MMTV integration site family, member 2B 0.0226703
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0225248
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0222757
CMIP c-Maf inducing protein 0.0220667
TRIM59 tripartite motif containing 59 0.0220246
DST dystonin 0.0219789
TRIO trio Rho guanine nucleotide exchange factor 0.0218947
TTC27 tetratricopeptide repeat domain 27 0.0215629
USP34 ubiquitin specific peptidase 34 0.0208521
RABGAP1L RAB GTPase activating protein 1-like 0.020718
SNAP25 synaptosomal-associated protein, 25kDa 0.0206403
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0204659
HMGA2 high mobility group AT-hook 2 0.0201452
BICD1 bicaudal D homolog 1 (Drosophila) 0.0200892
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0200412
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0200282
SCFD1 sec1 family domain containing 1 0.0199684
PATJ PATJ crumbs cell polarity complex component 0.0199583
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.019674
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0193532
AFF3 AF4/FMR2 family, member 3 0.019019
BRD2 bromodomain containing 2 0.0189906
VMP1 vacuole membrane protein 1 0.0187328
FOXP1 forkhead box P1 0.0186088
NF1 neurofibromin 1 0.0185528
RPL3 ribosomal protein L3 0.018407
RIMS2 regulating synaptic membrane exocytosis 2 0.0184049
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0182371
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0181765
ETNK1 ethanolamine kinase 1 0.0181186
CCT3 chaperonin containing TCP1, subunit 3 (gamma) 0.0180522
GPHN gephyrin 0.0180435
VCL vinculin 0.017879
LARP4B La ribonucleoprotein domain family, member 4B 0.0176613
YAP1 Yes-associated protein 1 0.0175871
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0173645
ASPH aspartate beta-hydroxylase 0.0171998
MCTP1 multiple C2 domains, transmembrane 1 0.0171554
HDAC9 histone deacetylase 9 0.0170803
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 0.0170004
RBM19 RNA binding motif protein 19 0.0169329
INO80 INO80 complex subunit 0.0168622
TUT7 terminal uridylyl transferase 7 0.0167271
ATP13A3 ATPase type 13A3 0.016634
CALD1 caldesmon 1 0.016603
FNDC3B fibronectin type III domain containing 3B 0.016466
BIRC2 baculoviral IAP repeat containing 2 0.0162918
ASXL1 additional sex combs like transcriptional regulator 1 0.0162074
COPA coatomer protein complex, subunit alpha 0.0161769
LRRC23 leucine rich repeat containing 23 0.0161367
SND1 staphylococcal nuclease and tudor domain containing 1 0.0161121
C1S complement component 1, s subcomponent 0.016089

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.141649
VIM vimentin -0.121475
PTMA prothymosin, alpha -0.117466
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.115889
TFPI2 tissue factor pathway inhibitor 2 -0.115848
TMSB10 thymosin beta 10 -0.109636
UBC ubiquitin C -0.0880485
EEF2 eukaryotic translation elongation factor 2 -0.0766733
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0758449
RPL23 ribosomal protein L23 -0.0726647
RPS27A ribosomal protein S27a -0.0615949
CSDE1 cold shock domain containing E1, RNA-binding -0.0536685
PCBP2 poly(rC) binding protein 2 -0.052999
RPL35A ribosomal protein L35a -0.0485572
WSB1 WD repeat and SOCS box containing 1 -0.0476485
CANX calnexin -0.0466109
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0464479
NAP1L1 nucleosome assembly protein 1-like 1 -0.0449726
TXNRD1 thioredoxin reductase 1 -0.0447178
KDM3A lysine (K)-specific demethylase 3A -0.0437495
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0436943
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0431535
RPL26 ribosomal protein L26 -0.0430937
KTN1 kinectin 1 (kinesin receptor) -0.0410018
BBX bobby sox homolog (Drosophila) -0.0405754
MYL12B myosin, light chain 12B, regulatory -0.0398206
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0388603
RPS21 ribosomal protein S21 -0.03846
XPO1 exportin 1 -0.0383009
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0378045
PDIA3 protein disulfide isomerase family A, member 3 -0.0375245
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0371757
RPS8 ribosomal protein S8 -0.036496
TPI1 triosephosphate isomerase 1 -0.0360126
CAVIN1 caveolae associated protein 1 -0.0354575
ENO1 enolase 1, (alpha) -0.034957
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0345727
RPL37A ribosomal protein L37a -0.0344076
GNAS GNAS complex locus -0.0333503
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0321334
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0315927
AHNAK AHNAK nucleoprotein -0.0311931
RPL19 ribosomal protein L19 -0.0304839
RPS29 ribosomal protein S29 -0.030254
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0300636
SEPTIN7 septin 7 -0.029784
OGA O-GlcNAcase -0.0294666
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0292601
RPL34 ribosomal protein L34 -0.0291899
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0288846
ZMYM2 zinc finger, MYM-type 2 -0.0288153
RBM25 RNA binding motif protein 25 -0.0286154
PFN1 profilin 1 -0.0282379
PDIA6 protein disulfide isomerase family A, member 6 -0.0281236
WDR45B WD repeat domain 45B -0.028018
RSF1 remodeling and spacing factor 1 -0.0279697
LMAN1 lectin, mannose-binding, 1 -0.0279696
ATP5F1B ATP synthase F1 subunit beta -0.027902
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0277108
RPS3 ribosomal protein S3 -0.0275929
RPL38 ribosomal protein L38 -0.0274747
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0272486
LDHB lactate dehydrogenase B -0.0271139
S100A6 S100 calcium binding protein A6 -0.0270108
EIF5B eukaryotic translation initiation factor 5B -0.0269869
PRRC2C proline-rich coiled-coil 2C -0.0268327
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0268248
RPS19 ribosomal protein S19 -0.0268219
LOC112694756 uncharaterized LOC112694756 -0.0266473
WASF2 WAS protein family, member 2 -0.0265178
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0264873
KDM2A lysine (K)-specific demethylase 2A -0.0263739
MIS18BP1 MIS18 binding protein 1 -0.0258466
SRP72 signal recognition particle 72kDa -0.0257433
PHIP pleckstrin homology domain interacting protein -0.0253397
BASP1 brain abundant, membrane attached signal protein 1 -0.0253133
RPLP1 ribosomal protein, large, P1 -0.0251488
RPL12 ribosomal protein L12 -0.0250622
TNPO1 transportin 1 -0.0250219
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.024452
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0244292
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0242122
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0241118
KPNB1 karyopherin (importin) beta 1 -0.0238241
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.0234176
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0233023
ZFR zinc finger RNA binding protein -0.0232564
ZMYND8 zinc finger, MYND-type containing 8 -0.0231853
RPL32 ribosomal protein L32 -0.023152
SCAF11 SR-related CTD-associated factor 11 -0.0231074
TPT1 tumor protein, translationally-controlled 1 -0.0230497
ANKRD12 ankyrin repeat domain 12 -0.0227849
KMT2A lysine (K)-specific methyltransferase 2A -0.022769
PKM pyruvate kinase, muscle -0.0224683
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.022433
BLTP2 bridge-like lipid transfer protein family member 2 -0.0222038
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0220856
DCAF7 DDB1 and CUL4 associated factor 7 -0.0220288
RPLP2 ribosomal protein, large, P2 -0.0219608
KIF5B kinesin family member 5B -0.0218223