DT-061_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DT-061 perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DT-061_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 0.176291
ZSWIM6 zinc finger, SWIM-type containing 6 0.152268
HMGA2 high mobility group AT-hook 2 0.149174
ASPH aspartate beta-hydroxylase 0.13552
EXT1 exostosin glycosyltransferase 1 0.134332
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.115104
ERRFI1 ERBB receptor feedback inhibitor 1 0.10175
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.101616
AKAP12 A kinase (PRKA) anchor protein 12 0.0996123
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0995397
LIMCH1 LIM and calponin homology domains 1 0.0865691
GRB10 growth factor receptor-bound protein 10 0.0757559
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.074397
TRIO trio Rho guanine nucleotide exchange factor 0.0723007
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.069385
EFNA5 ephrin-A5 0.0677584
FNDC3B fibronectin type III domain containing 3B 0.0677355
RASAL2 RAS protein activator like 2 0.0660059
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0659556
HIPK2 homeodomain interacting protein kinase 2 0.0631519
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.063115
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0612962
RAI14 retinoic acid induced 14 0.0610269
VCL vinculin 0.0583114
INTS6 integrator complex subunit 6 0.0570792
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0562845
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0556661
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.055196
SQSTM1 sequestosome 1 0.0534927
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0525297
STC2 stanniocalcin 2 0.0516239
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0515642
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0501819
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0495086
PDLIM5 PDZ and LIM domain 5 0.0468581
GPATCH2L G patch domain containing 2-like 0.0461148
CLIP2 CAP-GLY domain containing linker protein 2 0.0458309
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0457449
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0453521
ATF6 activating transcription factor 6 0.0452278
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0445141
NTN4 netrin 4 0.0439317
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0436731
ENO1 enolase 1, (alpha) 0.0430356
MRPS6 mitochondrial ribosomal protein S6 0.0427465
LOXL2 lysyl oxidase-like 2 0.0426435
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0425629
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0418607
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0416696
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0413831
ITGA1 integrin, alpha 1 0.0411582
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.04111
PALLD palladin, cytoskeletal associated protein 0.0402386
SLC35F3 solute carrier family 35, member F3 0.0397518
SOX9 SRY (sex determining region Y)-box 9 0.0385583
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0384314
DUSP6 dual specificity phosphatase 6 0.0383506
AHNAK AHNAK nucleoprotein 0.0378897
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0377103
PRKCA protein kinase C, alpha 0.0371021
MCL1 myeloid cell leukemia 1 0.0369714
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0366868
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0366391
TM4SF1 transmembrane 4 L six family member 1 0.0364646
CTBP2 C-terminal binding protein 2 0.0364088
S100A10 S100 calcium binding protein A10 0.0359633
FNDC3A fibronectin type III domain containing 3A 0.0353502
ATXN1 ataxin 1 0.034376
GLIS3 GLIS family zinc finger 3 0.0343334
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0343236
AEBP2 AE binding protein 2 0.0338975
LOC102724023 ES1 protein homolog, mitochondrial 0.0335207
PDIA4 protein disulfide isomerase family A, member 4 0.0334697
EGFR epidermal growth factor receptor 0.0332571
OSBPL8 oxysterol binding protein-like 8 0.0329151
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0329107
MBNL1 muscleblind-like splicing regulator 1 0.0328838
RAB7A RAB7A, member RAS oncogene family 0.0325919
MAP1B microtubule-associated protein 1B 0.0321953
MYO1E myosin IE 0.0321381
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0320576
SYT1 synaptotagmin I 0.0316147
SH3KBP1 SH3-domain kinase binding protein 1 0.0307447
MYOF myoferlin 0.0305652
ENO2 enolase 2 (gamma, neuronal) 0.0304447
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0301875
RND3 Rho family GTPase 3 0.0300338
PSD3 pleckstrin and Sec7 domain containing 3 0.0299019
MACF1 microtubule-actin crosslinking factor 1 0.0298992
FN1 fibronectin 1 0.0297873
PLIN2 perilipin 2 0.029652
GOLGB1 golgin B1 0.0296455
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0296373
SVIL supervillin 0.0295987
GPC6 glypican 6 0.0295704
ACTG1 actin gamma 1 0.0294915
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0294797
UBAP2 ubiquitin associated protein 2 0.029383
PDE4D phosphodiesterase 4D, cAMP-specific 0.0291116
SEC31A SEC31 homolog A (S. cerevisiae) 0.0289015

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.158144
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.128101
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.115704
CENPF centromere protein F, 350/400kDa -0.0785554
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0526514
PRRC2C proline-rich coiled-coil 2C -0.0523163
RBM25 RNA binding motif protein 25 -0.0467889
RBM39 RNA binding motif protein 39 -0.0448655
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.044066
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0429992
MKI67 marker of proliferation Ki-67 -0.0422497
OGA O-GlcNAcase -0.041239
MIS18BP1 MIS18 binding protein 1 -0.0401723
RNF145 ring finger protein 145 -0.0398673
NEK7 NIMA-related kinase 7 -0.0396483
ZNF292 zinc finger protein 292 -0.0382159
RPS6 ribosomal protein S6 -0.0365582
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.036403
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0355166
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0350097
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0340097
TPR translocated promoter region, nuclear basket protein -0.0339026
MARCHF6 membrane associated ring-CH-type finger 6 -0.0331083
PNISR PNN-interacting serine/arginine-rich protein -0.0325352
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0319439
ANLN anillin, actin binding protein -0.0315075
NAP1L1 nucleosome assembly protein 1-like 1 -0.030402
UGCG UDP-glucose ceramide glucosyltransferase -0.0302301
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0300389
RPL26 ribosomal protein L26 -0.0295983
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0293286
ETNK1 ethanolamine kinase 1 -0.0283041
OSMR oncostatin M receptor -0.0280154
FBXL5 F-box and leucine-rich repeat protein 5 -0.0277116
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0272142
PELO pelota homolog (Drosophila) -0.0269771
ZMYM2 zinc finger, MYM-type 2 -0.0267318
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0267203
KTN1 kinectin 1 (kinesin receptor) -0.0264659
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0264272
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0257814
FTL ferritin, light polypeptide -0.0257515
DIAPH3 diaphanous-related formin 3 -0.0253031
IRAK3 interleukin-1 receptor-associated kinase 3 -0.0252311
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0252101
XPO1 exportin 1 -0.0249473
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0249446
RTN4 reticulon 4 -0.0245745
WAC WW domain containing adaptor with coiled-coil -0.0244962
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0244752
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0243581
FAM168B family with sequence similarity 168, member B -0.0240374
TM9SF3 transmembrane 9 superfamily member 3 -0.0239425
RAB8B RAB8B, member RAS oncogene family -0.0237162
UBE2K ubiquitin-conjugating enzyme E2K -0.0236767
TENT2 terminal nucleotidyltransferase 2 -0.0236703
NUP58 nucleoporin 58 -0.0236385
ZFR zinc finger RNA binding protein -0.0234458
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0230821
TNPO1 transportin 1 -0.022747
RAB18 RAB18, member RAS oncogene family -0.0225933
TPX2 TPX2, microtubule-associated -0.0225416
FAF2 Fas associated factor family member 2 -0.0225254
PTBP3 polypyrimidine tract binding protein 3 -0.0224105
RPS2 ribosomal protein S2 -0.0223203
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0221932
HDGF hepatoma-derived growth factor -0.0218965
APOLD1 apolipoprotein L domain containing 1 -0.021699
SMOX spermine oxidase -0.0215398
ADD3 adducin 3 (gamma) -0.0213679
SCLT1 sodium channel and clathrin linker 1 -0.0212873
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0211337
HMGB3 high mobility group box 3 -0.0211077
WDR43 WD repeat domain 43 -0.0210673
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0210208
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0209412
TXNRD1 thioredoxin reductase 1 -0.0209277
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0206903
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0206902
RAB6A RAB6A, member RAS oncogene family -0.0206682
CAB39 calcium binding protein 39 -0.0205818
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0205585
AHR aryl hydrocarbon receptor -0.0205299
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0204334
TNPO3 transportin 3 -0.0204269
HOMER2 homer scaffolding protein 2 -0.0203677
CKAP2 cytoskeleton associated protein 2 -0.0203058
SS18 synovial sarcoma translocation, chromosome 18 -0.0202985
SH3GLB1 SH3-domain GRB2-like endophilin B1 -0.0201993
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0201604
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0201324
GCC2 GRIP and coiled-coil domain containing 2 -0.0200189
NEMF nuclear export mediator factor -0.0200176
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0196549
SINHCAF SIN3-HDAC complex associated factor -0.0195058
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0195036
CENPE centromere protein E, 312kDa -0.0194847
ECT2 epithelial cell transforming 2 -0.0193742
RAD21 RAD21 homolog (S. pombe) -0.0192256
RBM33 RNA binding motif protein 33 -0.0190684