DTP3_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HMGA2 high mobility group AT-hook 2 0.149278
VIM vimentin 0.121672
NAP1L1 nucleosome assembly protein 1-like 1 0.0856844
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0715248
RPS12 ribosomal protein S12 0.0694045
RPL37A ribosomal protein L37a 0.068204
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0635077
EHBP1 EH domain binding protein 1 0.0580717
PDGFC platelet derived growth factor C 0.0564315
RPS3 ribosomal protein S3 0.0551732
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0526494
YAP1 Yes-associated protein 1 0.0525625
RPS6 ribosomal protein S6 0.0464036
RPL31 ribosomal protein L31 0.0399371
PDE4D phosphodiesterase 4D, cAMP-specific 0.038166
SRRM2 serine/arginine repetitive matrix 2 0.0372819
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0371044
DPYD dihydropyrimidine dehydrogenase 0.0370024
EGR1 early growth response 1 0.0369999
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 0.0367057
ACTG1 actin gamma 1 0.0355005
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0350609
POTEF POTE ankyrin domain family, member F 0.0336826
AKAP12 A kinase (PRKA) anchor protein 12 0.032675
CMIP c-Maf inducing protein 0.0304268
SLC38A2 solute carrier family 38, member 2 0.0301838
BCHE butyrylcholinesterase 0.0296473
PCDH7 protocadherin 7 0.0291361
MACF1 microtubule-actin crosslinking factor 1 0.0277368
RPL37 ribosomal protein L37 0.0275314
LOC102724023 ES1 protein homolog, mitochondrial 0.0274007
ANXA1 annexin A1 0.0268538
RIMS2 regulating synaptic membrane exocytosis 2 0.0268164
NLGN1 neuroligin 1 0.0267865
RACK1 receptor for activated C kinase 1 0.0266917
RPS8 ribosomal protein S8 0.0263495
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0263094
SETX senataxin 0.0262799
RPL35A ribosomal protein L35a 0.0261734
ANKRD11 ankyrin repeat domain 11 0.0260999
MSRB3 methionine sulfoxide reductase B3 0.0256416
DLC1 DLC1 Rho GTPase activating protein 0.0253973
EEF1G eukaryotic translation elongation factor 1 gamma 0.0242439
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0242355
RPL3 ribosomal protein L3 0.0241871
RABGAP1L RAB GTPase activating protein 1-like 0.0240995
RPS27 ribosomal protein S27 0.0234927
RPS17 ribosomal protein S17 0.023432
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0229932
FAT1 FAT atypical cadherin 1 0.0225191
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 0.0222315
NACA nascent polypeptide-associated complex alpha subunit 0.0221736
HSPA8 heat shock 70kDa protein 8 0.0220598
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0220439
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0219956
CALR calreticulin 0.0217351
ZNF804A zinc finger protein 804A 0.0213978
CSMD3 CUB and Sushi multiple domains 3 0.021202
EGFR epidermal growth factor receptor 0.0209647
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0207703
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0207502
CUX1 cut-like homeobox 1 0.0202823
HMGA1 high mobility group AT-hook 1 0.0194248
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.019339
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0189266
PRDX1 peroxiredoxin 1 0.0189199
SKIL SKI-like proto-oncogene 0.0189104
NAV3 neuron navigator 3 0.0186544
ASPH aspartate beta-hydroxylase 0.0186278
ETV6 ets variant 6 0.0186103
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0186004
DOCK1 dedicator of cytokinesis 1 0.0185047
INTS6 integrator complex subunit 6 0.018437
RPL26 ribosomal protein L26 0.0183261
PDCD6 programmed cell death 6 0.0182902
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0182379
NR5A2 nuclear receptor subfamily 5, group A, member 2 0.0180566
GATAD2B GATA zinc finger domain containing 2B 0.0180481
PPIA peptidylprolyl isomerase A (cyclophilin A) 0.0179717
EXOC4 exocyst complex component 4 0.0178531
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0178276
KMT2D lysine (K)-specific methyltransferase 2D 0.0178195
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0177614
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0176854
VCAN versican 0.0175797
MAML3 mastermind-like 3 (Drosophila) 0.0175117
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0172915
NHSL1 NHS-like 1 0.0171932
NONO non-POU domain containing, octamer-binding 0.0170786
CD9 CD9 molecule 0.0170526
RPL10A ribosomal protein L10a 0.0168501
NCOR2 nuclear receptor corepressor 2 0.0168202
PLEC plectin 0.0168115
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0166813
RASAL2 RAS protein activator like 2 0.0166719
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0166434
CELF2 CUGBP, Elav-like family member 2 0.016625
EIF4B eukaryotic translation initiation factor 4B 0.0165738
PGGHG protein-glucosylgalactosylhydroxylysine glucosidase 0.0161277
EEF2 eukaryotic translation elongation factor 2 0.0159308

decreased expression

Symbol Name Standardized Value
AREG amphiregulin -0.265545
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.261697
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.116422
TMSB10 thymosin beta 10 -0.0774593
ANKRD12 ankyrin repeat domain 12 -0.0628611
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0585049
UBC ubiquitin C -0.0541678
SMC4 structural maintenance of chromosomes 4 -0.0471487
CXADR coxsackie virus and adenovirus receptor -0.0437046
XPO1 exportin 1 -0.0432583
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0429764
EIF4A2 eukaryotic translation initiation factor 4A2 -0.041081
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0409822
KIF5B kinesin family member 5B -0.0405854
RPS27A ribosomal protein S27a -0.0403726
RTN4 reticulon 4 -0.0391987
RPS21 ribosomal protein S21 -0.037478
RPL8 ribosomal protein L8 -0.0372582
KDM3A lysine (K)-specific demethylase 3A -0.0362823
ATP5F1B ATP synthase F1 subunit beta -0.0360033
H1-0 H1.0 linker histone -0.0358844
NIPBL Nipped-B homolog (Drosophila) -0.0354886
EDN1 endothelin 1 -0.0347204
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0342984
PCBP2 poly(rC) binding protein 2 -0.0332874
RBM25 RNA binding motif protein 25 -0.0332391
ZNF292 zinc finger protein 292 -0.032873
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0327925
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.030878
TMEM41B transmembrane protein 41B -0.0306624
TAS2R14 taste receptor, type 2, member 14 -0.0306503
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0306405
RPLP2 ribosomal protein, large, P2 -0.0306376
FTL ferritin, light polypeptide -0.0306319
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0300505
YBX3 Y box binding protein 3 -0.0295331
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0292803
GOLGA4 golgin A4 -0.0286413
RAB1A RAB1A, member RAS oncogene family -0.0280861
RPL34 ribosomal protein L34 -0.027871
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0277211
ECT2 epithelial cell transforming 2 -0.0276936
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0275644
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0274089
CLDN1 claudin 1 -0.0270802
CCND1 cyclin D1 -0.0266172
IL6ST interleukin 6 signal transducer -0.0265819
RPL23 ribosomal protein L23 -0.0262261
RBM27 RNA binding motif protein 27 -0.0261881
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0261268
SRRM1 serine/arginine repetitive matrix 1 -0.0260778
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0260092
RPS13 ribosomal protein S13 -0.0255824
CEP95 centrosomal protein 95kDa -0.0254089
ZNF207 zinc finger protein 207 -0.0253802
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0252611
RPS24 ribosomal protein S24 -0.0251376
RRM2 ribonucleotide reductase M2 -0.0250378
TUBA1B tubulin, alpha 1b -0.0249784
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0249515
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0248974
PREPL prolyl endopeptidase-like -0.0236295
LMAN1 lectin, mannose-binding, 1 -0.023458
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0234099
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0233116
GARS1 glycyl-tRNA synthetase 1 -0.0231509
TMEM123 transmembrane protein 123 -0.0229736
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0229489
OGA O-GlcNAcase -0.0228882
CHD1 chromodomain helicase DNA binding protein 1 -0.0228427
SEC62 SEC62 homolog (S. cerevisiae) -0.022821
RPLP0 ribosomal protein, large, P0 -0.0226917
TNPO1 transportin 1 -0.0222881
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0220578
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0220297
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0218651
CPOX coproporphyrinogen oxidase -0.0215081
ANKHD1 ankyrin repeat and KH domain containing 1 -0.021431
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0213849
TASOR2 transcription activation suppressor family member 2 -0.0213643
USP34 ubiquitin specific peptidase 34 -0.0213311
SEPTIN7 septin 7 -0.0211496
S100A9 S100 calcium binding protein A9 -0.0211104
R3HDM1 R3H domain containing 1 -0.0210837
CAMKMT calmodulin-lysine N-methyltransferase -0.0205834
STAU1 staufen double-stranded RNA binding protein 1 -0.0205672
RPL38 ribosomal protein L38 -0.0203968
LCORL ligand dependent nuclear receptor corepressor-like -0.0203138
USP53 ubiquitin specific peptidase 53 -0.0201255
BTG3 BTG family, member 3 -0.0198361
TPX2 TPX2, microtubule-associated -0.0198329
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0198261
CCNI cyclin I -0.0196963
ZNF217 zinc finger protein 217 -0.0196887
GRB2 growth factor receptor-bound protein 2 -0.0196745
MKI67 marker of proliferation Ki-67 -0.0194966
PTMA prothymosin, alpha -0.0193899
EPHA6 EPH receptor A6 -0.0192864
CBX3 chromobox homolog 3 -0.0192806
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0192219