DTP3_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LPIN1 lipin 1 0.118352
FMN1 formin 1 0.0935008
EEF2 eukaryotic translation elongation factor 2 0.0638917
LSAMP limbic system-associated membrane protein 0.0615651
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0577249
TRIO trio Rho guanine nucleotide exchange factor 0.0558208
MYH9 myosin, heavy chain 9, non-muscle 0.0439849
HSPA8 heat shock 70kDa protein 8 0.043067
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0409044
RNF213 ring finger protein 213 0.0392311
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0383428
NCOR2 nuclear receptor corepressor 2 0.0382936
MSI2 musashi RNA-binding protein 2 0.0376623
THSD4 thrombospondin, type I, domain containing 4 0.0343832
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0338859
RPL3 ribosomal protein L3 0.0337667
SMAD3 SMAD family member 3 0.0333492
TRIB2 tribbles pseudokinase 2 0.0332
NONO non-POU domain containing, octamer-binding 0.0307353
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0306775
SET SET nuclear proto-oncogene 0.0297875
SRRM2 serine/arginine repetitive matrix 2 0.0297309
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0286347
AHNAK AHNAK nucleoprotein 0.0284462
PBX1 pre-B-cell leukemia homeobox 1 0.0277942
AOPEP aminopeptidase O (putative) 0.0276281
KLHL13 kelch-like family member 13 0.0276256
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0275959
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0272576
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0266238
EXT1 exostosin glycosyltransferase 1 0.0261809
NALF1 NALCN channel auxiliary factor 1 0.0261564
FRMD4A FERM domain containing 4A 0.026093
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0256248
VEGFA vascular endothelial growth factor A 0.0252339
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0248939
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0242743
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0241567
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0240226
PLEC plectin 0.0239721
EEF1G eukaryotic translation elongation factor 1 gamma 0.0237795
IGF1R insulin-like growth factor 1 receptor 0.0236018
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0232877
TPM1 tropomyosin 1 (alpha) 0.0232144
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0230686
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0229677
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0229544
DSCAM Down syndrome cell adhesion molecule 0.0229126
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0226093
ZMIZ1 zinc finger, MIZ-type containing 1 0.0220414
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0217649
TNIP1 TNFAIP3 interacting protein 1 0.0217164
PDE10A phosphodiesterase 10A 0.0216698
CYTH1 cytohesin 1 0.0211862
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0208639
DST dystonin 0.0205531
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0205038
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0203645
DDIT4 DNA-damage-inducible transcript 4 0.0203353
MPRIP myosin phosphatase Rho interacting protein 0.0203285
ARGLU1 arginine and glutamate rich 1 0.0203092
SON SON DNA binding protein 0.0202385
NUMA1 nuclear mitotic apparatus protein 1 0.0198339
RAD23B RAD23 homolog B (S. cerevisiae) 0.0196862
RUNX1 runt-related transcription factor 1 0.0195014
UNC5C unc-5 homolog C (C. elegans) 0.0194998
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0192955
GLI3 GLI family zinc finger 3 0.0192153
NFE2L1 nuclear factor, erythroid 2-like 1 0.0191662
TBX2 T-box 2 0.0191094
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0190685
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0190213
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0189303
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0186172
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0185292
TPST1 tyrosylprotein sulfotransferase 1 0.0183648
SOD2 superoxide dismutase 2, mitochondrial 0.0183182
RET ret proto-oncogene 0.0182803
FOXO3 forkhead box O3 0.0180876
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0178755
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0178718
NRIP1 nuclear receptor interacting protein 1 0.0178267
NFIB nuclear factor I/B 0.0176888
EWSR1 EWS RNA-binding protein 1 0.0175294
TENM4 teneurin transmembrane protein 4 0.0174683
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0171986
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0171961
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0171706
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0171121
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae) 0.0170843
DLG5 discs, large homolog 5 (Drosophila) 0.0170268
RLIM ring finger protein, LIM domain interacting 0.0168376
TLE4 transducin-like enhancer of split 4 0.0167596
TP53BP1 tumor protein p53 binding protein 1 0.0167064
IGF2R insulin-like growth factor 2 receptor 0.0166423
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 0.016607
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0165925
CCNY cyclin Y 0.0165319
ZEB1 zinc finger E-box binding homeobox 1 0.0165111
ADGRG6 adhesion G protein-coupled receptor G6 0.016408

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.516021
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.269938
AKAP12 A kinase (PRKA) anchor protein 12 -0.104245
NRG1 neuregulin 1 -0.0904034
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.0868043
VIM vimentin -0.0619744
COL1A1 collagen, type I, alpha 1 -0.0593985
PTMA prothymosin, alpha -0.0569392
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0559513
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0488795
GDF15 growth differentiation factor 15 -0.0486571
PTPRD protein tyrosine phosphatase, receptor type, D -0.0482278
MEF2A myocyte enhancer factor 2A -0.0460475
RPL34 ribosomal protein L34 -0.0427138
RPL23 ribosomal protein L23 -0.0412512
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0395744
RPLP1 ribosomal protein, large, P1 -0.0390668
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0390133
IFI16 interferon, gamma-inducible protein 16 -0.0382917
GOLGA4 golgin A4 -0.0375015
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0359657
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0353868
NDRG1 N-myc downstream regulated 1 -0.0353814
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0343807
STC1 stanniocalcin 1 -0.0341806
RPS24 ribosomal protein S24 -0.0337177
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0333533
DCAF7 DDB1 and CUL4 associated factor 7 -0.0329402
SOS1 son of sevenless homolog 1 (Drosophila) -0.0325788
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0317014
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0311113
ZBTB20 zinc finger and BTB domain containing 20 -0.0308673
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0306174
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0301284
GPC5 glypican 5 -0.0294823
LINGO2 leucine rich repeat and Ig domain containing 2 -0.0292523
IER3 immediate early response 3 -0.0286989
EIF1 eukaryotic translation initiation factor 1 -0.0282449
VDAC1 voltage-dependent anion channel 1 -0.02807
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0274457
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0273527
RPL19 ribosomal protein L19 -0.027113
COL3A1 collagen, type III, alpha 1 -0.0270483
FNBP1 formin binding protein 1 -0.0268062
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0267718
LIMS1 LIM and senescent cell antigen-like domains 1 -0.026508
S100A6 S100 calcium binding protein A6 -0.0263716
HILPDA hypoxia inducible lipid droplet-associated -0.0262709
SEC31A SEC31 homolog A (S. cerevisiae) -0.0250379
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0249309
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.024788
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.024155
RAB7A RAB7A, member RAS oncogene family -0.0238622
KDM5B lysine (K)-specific demethylase 5B -0.0238317
ACBD3 acyl-CoA binding domain containing 3 -0.0232095
ZNF292 zinc finger protein 292 -0.0230661
S100A9 S100 calcium binding protein A9 -0.0224442
GNAS GNAS complex locus -0.0224144
LIMCH1 LIM and calponin homology domains 1 -0.021784
RPL35A ribosomal protein L35a -0.0213773
RPL12 ribosomal protein L12 -0.0208639
RPL38 ribosomal protein L38 -0.0205994
CCNI cyclin I -0.020548
GCC2 GRIP and coiled-coil domain containing 2 -0.0204749
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0204048
LMAN1 lectin, mannose-binding, 1 -0.0203823
HMGA1 high mobility group AT-hook 1 -0.0201014
TMSB10 thymosin beta 10 -0.0200705
BICD1 bicaudal D homolog 1 (Drosophila) -0.0199634
TPT1 tumor protein, translationally-controlled 1 -0.0197939
RSL1D1 ribosomal L1 domain containing 1 -0.0197518
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0193761
KDM2A lysine (K)-specific demethylase 2A -0.0191124
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0189956
RAB1A RAB1A, member RAS oncogene family -0.0188718
RPS19 ribosomal protein S19 -0.018852
DIAPH2 diaphanous-related formin 2 -0.0187138
WDR45B WD repeat domain 45B -0.0186698
BRWD1 bromodomain and WD repeat domain containing 1 -0.0186514
SLITRK6 SLIT and NTRK-like family, member 6 -0.0186509
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.018497
FAM162A family with sequence similarity 162, member A -0.018371
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0182349
RTN4 reticulon 4 -0.0179248
GARS1 glycyl-tRNA synthetase 1 -0.0178539
CALD1 caldesmon 1 -0.0175723
RPL27 ribosomal protein L27 -0.0175146
LCORL ligand dependent nuclear receptor corepressor-like -0.0173762
FKBP10 FK506 binding protein 10, 65 kDa -0.0170216
SRP54 signal recognition particle 54kDa -0.0169605
FTL ferritin, light polypeptide -0.0169371
RPS11 ribosomal protein S11 -0.0169135
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0168138
PIBF1 progesterone immunomodulatory binding factor 1 -0.0167863
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0166863
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0165681
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase) -0.0163569
RBM25 RNA binding motif protein 25 -0.0163425
DLG1 discs, large homolog 1 (Drosophila) -0.0162861
PDIA3 protein disulfide isomerase family A, member 3 -0.0162512