DTP3_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.107446
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.107211
AKAP12 A kinase (PRKA) anchor protein 12 0.0744007
IGFBP1 insulin-like growth factor binding protein 1 0.0736964
MYH9 myosin, heavy chain 9, non-muscle 0.0724079
RPL3 ribosomal protein L3 0.0654801
RPS12 ribosomal protein S12 0.0611591
VEGFA vascular endothelial growth factor A 0.0599912
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0588412
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0535563
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.053448
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0508129
SRRM2 serine/arginine repetitive matrix 2 0.050203
ASPH aspartate beta-hydroxylase 0.0499102
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0482958
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0474288
DDIT4 DNA-damage-inducible transcript 4 0.0463031
KRT8 keratin 8, type II 0.0460886
TNS1 tensin 1 0.0441722
RPL37A ribosomal protein L37a 0.0438798
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0426165
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0408185
KDM3A lysine (K)-specific demethylase 3A 0.0400634
RPL11 ribosomal protein L11 0.0365038
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0354212
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0349185
PLEC plectin 0.0349068
NDRG1 N-myc downstream regulated 1 0.0348752
RPS6 ribosomal protein S6 0.0346846
SET SET nuclear proto-oncogene 0.0336982
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0331797
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0315395
APLP2 amyloid beta (A4) precursor-like protein 2 0.0311188
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0309036
EFNA1 ephrin-A1 0.0307325
DSCAM Down syndrome cell adhesion molecule 0.0305745
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0294444
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0294152
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.028999
ANKRD11 ankyrin repeat domain 11 0.0282001
NFE2L1 nuclear factor, erythroid 2-like 1 0.0281952
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0279492
TMSB10 thymosin beta 10 0.0278785
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0277666
EIF4B eukaryotic translation initiation factor 4B 0.027625
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0274947
TNIP1 TNFAIP3 interacting protein 1 0.0269087
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0267617
RPS3 ribosomal protein S3 0.0267427
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0262921
B2M beta-2-microglobulin 0.0258893
RPL37 ribosomal protein L37 0.0255124
PEG3 paternally expressed 3 0.0254857
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0248532
TF transferrin 0.0244847
BRD4 bromodomain containing 4 0.0244819
NAP1L1 nucleosome assembly protein 1-like 1 0.0244801
CCNY cyclin Y 0.0244796
LDHA lactate dehydrogenase A 0.0244672
RPL9 ribosomal protein L9 0.0244499
HSPA8 heat shock 70kDa protein 8 0.0244322
NONO non-POU domain containing, octamer-binding 0.0242132
FMNL2 formin-like 2 0.0240354
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0236283
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0235106
CEP250 centrosomal protein 250kDa 0.0232696
INSIG2 insulin induced gene 2 0.0231671
AHSG alpha-2-HS-glycoprotein 0.0228363
KDM4C lysine (K)-specific demethylase 4C 0.022734
RPL31 ribosomal protein L31 0.022599
RPS17 ribosomal protein S17 0.0224567
FAT1 FAT atypical cadherin 1 0.0224035
GIGYF2 GRB10 interacting GYF protein 2 0.0223906
BHLHE40 basic helix-loop-helix family, member e40 0.0223116
SORBS1 sorbin and SH3 domain containing 1 0.0222332
GSE1 Gse1 coiled-coil protein 0.0217095
PUM1 pumilio RNA-binding family member 1 0.0214462
OPTN optineurin 0.0210991
SFTPA2 surfactant protein A2 0.0208842
SOD2 superoxide dismutase 2, mitochondrial 0.0208674
INTS6 integrator complex subunit 6 0.0206433
BZW1 basic leucine zipper and W2 domains 1 0.0206033
FOXN3 forkhead box N3 0.0199323
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0198966
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0197834
ENO1 enolase 1, (alpha) 0.0197208
AFDN afadin, adherens junction formation factor 0.0195154
MACF1 microtubule-actin crosslinking factor 1 0.0194698
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0194576
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0194339
NACA nascent polypeptide-associated complex alpha subunit 0.0193384
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0192498
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0192478
JAG1 jagged 1 0.0188946
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1 0.0187584
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.018753
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0186776
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0185547
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3 0.0185417
ZMIZ1 zinc finger, MIZ-type containing 1 0.0183485

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.30907
FN1 fibronectin 1 -0.268621
APOB apolipoprotein B -0.225437
IGF2 insulin-like growth factor 2 -0.154222
EHBP1 EH domain binding protein 1 -0.128164
GPC6 glypican 6 -0.119842
C3 complement component 3 -0.117002
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.109795
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.103253
ITGAV integrin, alpha V -0.097527
VCL vinculin -0.0974643
SLC38A2 solute carrier family 38, member 2 -0.0828945
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0816684
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0813632
NPAS2 neuronal PAS domain protein 2 -0.0811671
TM4SF1 transmembrane 4 L six family member 1 -0.0751142
MAML2 mastermind-like 2 (Drosophila) -0.0712892
DLC1 DLC1 Rho GTPase activating protein -0.0681737
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.062985
FBF1 Fas (TNFRSF6) binding factor 1 -0.0612854
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0594126
NKD1 naked cuticle homolog 1 (Drosophila) -0.0587921
GPAM glycerol-3-phosphate acyltransferase, mitochondrial -0.0585029
LMCD1 LIM and cysteine-rich domains 1 -0.0582708
TRIM26 tripartite motif containing 26 -0.0577891
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0563176
PTCHD4 patched domain containing 4 -0.0550742
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0532207
ZBTB20 zinc finger and BTB domain containing 20 -0.0517058
JMJD1C jumonji domain containing 1C -0.051056
EGR1 early growth response 1 -0.0503737
DNAH17 dynein, axonemal, heavy chain 17 -0.0495941
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0493037
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0492167
TMEM123 transmembrane protein 123 -0.0466531
GPC3 glypican 3 -0.043694
FNDC3A fibronectin type III domain containing 3A -0.0436887
GK glycerol kinase -0.0425238
STAU1 staufen double-stranded RNA binding protein 1 -0.0423491
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0412588
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0403013
RUNX1 runt-related transcription factor 1 -0.0399009
A2M alpha-2-macroglobulin -0.0389937
GDF15 growth differentiation factor 15 -0.0386795
TM9SF3 transmembrane 9 superfamily member 3 -0.0372576
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0367059
PDGFB platelet-derived growth factor beta polypeptide -0.0366444
ZNF644 zinc finger protein 644 -0.036528
MBNL3 muscleblind-like splicing regulator 3 -0.036387
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0360748
FAM135A family with sequence similarity 135, member A -0.0360038
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0357434
CCL20 chemokine (C-C motif) ligand 20 -0.0346952
MRTFA myocardin related transcription factor A -0.0346734
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0344698
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0344442
DOK6 docking protein 6 -0.0342948
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0329948
MYO1E myosin IE -0.0326221
AFF4 AF4/FMR2 family, member 4 -0.0325427
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0324204
FRMD5 FERM domain containing 5 -0.0323823
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0321424
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0307133
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 -0.0300932
RAPGEF5 Rap guanine nucleotide exchange factor (GEF) 5 -0.0300753
PLAC8 placenta-specific 8 -0.0300568
TGFBI transforming growth factor, beta-induced, 68kDa -0.0295389
PTPRK protein tyrosine phosphatase, receptor type, K -0.0294877
ELL2 elongation factor, RNA polymerase II, 2 -0.0287972
OSMR oncostatin M receptor -0.0284352
ZMYND8 zinc finger, MYND-type containing 8 -0.0279205
BCL2L1 BCL2-like 1 -0.0279037
NCOA7 nuclear receptor coactivator 7 -0.0278555
PDIA3 protein disulfide isomerase family A, member 3 -0.0277333
GLG1 golgi glycoprotein 1 -0.027715
STK17A serine/threonine kinase 17a -0.0275181
UBASH3B ubiquitin associated and SH3 domain containing B -0.0274422
GNAS GNAS complex locus -0.0270306
DST dystonin -0.0270195
BPTF bromodomain PHD finger transcription factor -0.0269204
LYZ lysozyme -0.0262756
CAPZB capping protein (actin filament) muscle Z-line, beta -0.0257394
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0254661
RAI14 retinoic acid induced 14 -0.0251273
MALRD1 MAM and LDL receptor class A domain containing 1 -0.0249166
DENND4A DENN/MADD domain containing 4A -0.0245372
FILIP1L filamin A interacting protein 1-like -0.0242806
SOX5 SRY (sex determining region Y)-box 5 -0.0241075
IER3 immediate early response 3 -0.0240484
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0238557
LOX lysyl oxidase -0.0236468
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0235134
GCC2 GRIP and coiled-coil domain containing 2 -0.0235067
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0232667
NRIP1 nuclear receptor interacting protein 1 -0.023221
FTH1 ferritin, heavy polypeptide 1 -0.0229674
RNF213 ring finger protein 213 -0.0228743
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0227266
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0227117