DTP3_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FAT1 FAT atypical cadherin 1 0.127127
KRT8 keratin 8, type II 0.122539
VEGFA vascular endothelial growth factor A 0.110744
SRRM2 serine/arginine repetitive matrix 2 0.0942659
EEF2 eukaryotic translation elongation factor 2 0.0938255
CEMIP cell migration inducing protein, hyaluronan binding 0.090672
LMO7 LIM domain 7 0.0878839
MUC6 mucin 6, oligomeric mucus/gel-forming 0.072893
RPL3 ribosomal protein L3 0.0689188
MYH9 myosin, heavy chain 9, non-muscle 0.0551258
PLEC plectin 0.0474885
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0467984
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0439282
ANKRD11 ankyrin repeat domain 11 0.0434888
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0424175
NCOR2 nuclear receptor corepressor 2 0.0424109
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0421068
MPRIP myosin phosphatase Rho interacting protein 0.0419706
NUMA1 nuclear mitotic apparatus protein 1 0.0402884
TNS4 tensin 4 0.0383247
MACF1 microtubule-actin crosslinking factor 1 0.0378578
MINK1 misshapen-like kinase 1 0.037681
ABHD2 abhydrolase domain containing 2 0.0363719
DSPP dentin sialophosphoprotein 0.0352699
KRT18 keratin 18, type I 0.035187
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0345047
HSPA8 heat shock 70kDa protein 8 0.0339362
TNIP1 TNFAIP3 interacting protein 1 0.0323039
ANXA11 annexin A11 0.0317274
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0301044
TMSB4X thymosin beta 4, X-linked 0.0295692
PCBP2 poly(rC) binding protein 2 0.027761
NONO non-POU domain containing, octamer-binding 0.0276743
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0275729
EEF1G eukaryotic translation elongation factor 1 gamma 0.0269383
TPM3 tropomyosin 3 0.0264476
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0261431
ITGA6 integrin, alpha 6 0.0261246
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.025935
SET SET nuclear proto-oncogene 0.0256391
SPON1 spondin 1, extracellular matrix protein 0.0250983
NDRG1 N-myc downstream regulated 1 0.0250443
EPHA2 EPH receptor A2 0.0245611
MYO5B myosin VB 0.0245179
MLEC malectin 0.0242889
DNM2 dynamin 2 0.0235209
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0234892
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0234688
AKAP13 A kinase (PRKA) anchor protein 13 0.0233587
EIF4B eukaryotic translation initiation factor 4B 0.0233382
KTN1 kinectin 1 (kinesin receptor) 0.0232766
POTEF POTE ankyrin domain family, member F 0.0231679
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0230292
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0224732
TNRC18 trinucleotide repeat containing 18 0.0221901
ARGLU1 arginine and glutamate rich 1 0.0221755
RNF145 ring finger protein 145 0.0217112
ITPRID2 ITPR interacting domain containing 2 0.0216963
EIF4A2 eukaryotic translation initiation factor 4A2 0.0215911
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0215561
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0207775
UBE2H ubiquitin-conjugating enzyme E2H 0.0207377
TXNIP thioredoxin interacting protein 0.0202548
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0200319
AFF1 AF4/FMR2 family, member 1 0.0198677
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0198603
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0195671
MED13 mediator complex subunit 13 0.0194995
CDK5RAP3 CDK5 regulatory subunit associated protein 3 0.019425
BRD4 bromodomain containing 4 0.0194198
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.019319
CEMIP2 cell migration inducing hyaluronidase 2 0.0191864
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0191486
DDX39B DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B 0.0189332
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0187855
PUM1 pumilio RNA-binding family member 1 0.0187794
PCM1 pericentriolar material 1 0.0187343
PNN pinin, desmosome associated protein 0.0186858
APLP2 amyloid beta (A4) precursor-like protein 2 0.0184712
ITGB4 integrin, beta 4 0.0184412
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0183965
HYOU1 hypoxia up-regulated 1 0.0183571
CPNE1 copine I 0.0182262
SNX9 sorting nexin 9 0.0180884
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0179547
DSCAM Down syndrome cell adhesion molecule 0.0177004
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0173564
ERRFI1 ERBB receptor feedback inhibitor 1 0.0172935
LENG8 leukocyte receptor cluster (LRC) member 8 0.0170217
MUC13 mucin 13, cell surface associated 0.0167409
SLK STE20-like kinase 0.0167168
GAK cyclin G associated kinase 0.0166387
RBM33 RNA binding motif protein 33 0.0165737
YAP1 Yes-associated protein 1 0.0165105
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0164963
YTHDC1 YTH domain containing 1 0.0164353
SVIL supervillin 0.0163752
RNASE12 ribonuclease, RNase A family, 12 (non-active) 0.0161647
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0160543
ARHGAP42 Rho GTPase activating protein 42 0.016046

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.286984
NPSR1 neuropeptide S receptor 1 -0.212415
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.197842
PTMA prothymosin, alpha -0.139786
TPT1 tumor protein, translationally-controlled 1 -0.121196
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0924568
ANXA2 annexin A2 -0.0888786
TMSB10 thymosin beta 10 -0.0871524
GPHN gephyrin -0.0829617
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0792675
ALCAM activated leukocyte cell adhesion molecule -0.0732298
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0718277
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0716743
GMDS GDP-mannose 4,6-dehydratase -0.0656717
NALF1 NALCN channel auxiliary factor 1 -0.0596005
RPS24 ribosomal protein S24 -0.0517044
VCL vinculin -0.0516369
RPL34 ribosomal protein L34 -0.0511496
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0504638
SLCO1B3 solute carrier organic anion transporter family, member 1B3 -0.0441421
PRSS3 protease, serine, 3 -0.0394459
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0393387
EPCAM epithelial cell adhesion molecule -0.0392538
AGR2 anterior gradient 2 -0.0388106
RPS8 ribosomal protein S8 -0.03753
RPLP1 ribosomal protein, large, P1 -0.037207
POF1B premature ovarian failure, 1B -0.0357725
PCDHB16 protocadherin beta 16 -0.0352896
GOLGA4 golgin A4 -0.0351959
GCC2 GRIP and coiled-coil domain containing 2 -0.0351833
TAS2R14 taste receptor, type 2, member 14 -0.0351827
IER3 immediate early response 3 -0.0350449
ONECUT3 one cut homeobox 3 -0.0350117
EREG epiregulin -0.0345756
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.03364
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0331402
RPL35A ribosomal protein L35a -0.0327109
RPL26 ribosomal protein L26 -0.0326654
INSIG1 insulin induced gene 1 -0.0324965
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0320176
AHNAK AHNAK nucleoprotein -0.0319042
MBD5 methyl-CpG binding domain protein 5 -0.0317146
PPARG peroxisome proliferator-activated receptor gamma -0.0316186
CADPS Ca++-dependent secretion activator -0.0309052
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0306421
DLG1 discs, large homolog 1 (Drosophila) -0.0305822
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0303412
HMGB1 high mobility group box 1 -0.0298451
NFIA nuclear factor I/A -0.0297248
RPL12 ribosomal protein L12 -0.0296228
CCND1 cyclin D1 -0.0294832
SBF2 SET binding factor 2 -0.0291775
BTG1 B-cell translocation gene 1, anti-proliferative -0.0290847
RAB1A RAB1A, member RAS oncogene family -0.0286684
ARHGAP32 Rho GTPase activating protein 32 -0.0285684
CD44 CD44 molecule (Indian blood group) -0.0283662
BTBD9 BTB (POZ) domain containing 9 -0.0282467
FHIT fragile histidine triad -0.028034
HMGA1 high mobility group AT-hook 1 -0.0279708
PTPRK protein tyrosine phosphatase, receptor type, K -0.0278072
GDF15 growth differentiation factor 15 -0.0277664
RPLP2 ribosomal protein, large, P2 -0.0276087
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0274194
CANX calnexin -0.0273806
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0272458
ENO1 enolase 1, (alpha) -0.0270866
MON2 MON2 homolog (S. cerevisiae) -0.0270208
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0268866
GNAS GNAS complex locus -0.0264633
TUBB4B tubulin, beta 4B class IVb -0.0262204
LDLR low density lipoprotein receptor -0.0260394
ABLIM1 actin binding LIM protein 1 -0.026035
RPS23 ribosomal protein S23 -0.0258539
TRIM2 tripartite motif containing 2 -0.0256811
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0256538
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0255469
S100A10 S100 calcium binding protein A10 -0.0252687
PIGR polymeric immunoglobulin receptor -0.0252622
ANTXR2 anthrax toxin receptor 2 -0.0252434
S100A6 S100 calcium binding protein A6 -0.025092
RPL13A ribosomal protein L13a -0.0249483
RPS6 ribosomal protein S6 -0.0249472
TMEM135 transmembrane protein 135 -0.0249096
LDHA lactate dehydrogenase A -0.0248664
LAMA4 laminin, alpha 4 -0.0244862
RRBP1 ribosome binding protein 1 -0.0244741
ARF1 ADP-ribosylation factor 1 -0.0240122
RPLP0 ribosomal protein, large, P0 -0.0239093
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0238771
FTL ferritin, light polypeptide -0.02384
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0232614
COG5 component of oligomeric golgi complex 5 -0.0230198
MAP4 microtubule-associated protein 4 -0.0229581
PGK1 phosphoglycerate kinase 1 -0.0229034
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 -0.0228126
KIF5B kinesin family member 5B -0.0226791
RPS27A ribosomal protein S27a -0.0225083
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0224938
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0224776
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0223447