DTP3_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CAPRIN2 caprin family member 2 0.0825787
MT2A metallothionein 2A 0.0801409
EEF2 eukaryotic translation elongation factor 2 0.0701918
BCAR3 breast cancer anti-estrogen resistance 3 0.0639039
RPS12 ribosomal protein S12 0.0637726
WWTR1 WW domain containing transcription regulator 1 0.0584598
MACF1 microtubule-actin crosslinking factor 1 0.0573445
MYH9 myosin, heavy chain 9, non-muscle 0.055185
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0531592
DST dystonin 0.0512924
SQSTM1 sequestosome 1 0.0481483
ERRFI1 ERBB receptor feedback inhibitor 1 0.0473673
RPL37A ribosomal protein L37a 0.0469787
PSD3 pleckstrin and Sec7 domain containing 3 0.0465501
SMAD3 SMAD family member 3 0.0415993
HSPA8 heat shock 70kDa protein 8 0.041045
NONO non-POU domain containing, octamer-binding 0.039612
RPL31 ribosomal protein L31 0.0392369
RPL3 ribosomal protein L3 0.0388975
TXNRD1 thioredoxin reductase 1 0.0378824
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0375959
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 0.037531
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0371931
PLEC plectin 0.0363535
SRRM2 serine/arginine repetitive matrix 2 0.0349703
RPS3 ribosomal protein S3 0.0348253
RPL36 ribosomal protein L36 0.0329342
EZR ezrin 0.0319223
LOC112694756 uncharaterized LOC112694756 0.0305103
CFLAR CASP8 and FADD-like apoptosis regulator 0.0304475
RPS17 ribosomal protein S17 0.0299277
RPL26 ribosomal protein L26 0.0298854
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0298689
NIBAN2 niban apoptosis regulator 2 0.0297796
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.029472
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0292174
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0289821
ARHGAP5 Rho GTPase activating protein 5 0.0285464
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0280105
ADARB1 adenosine deaminase, RNA-specific, B1 0.0277952
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0276713
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0272945
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0270655
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0265719
ANKRD11 ankyrin repeat domain 11 0.026473
ACTN1 actinin, alpha 1 0.0263741
CMIP c-Maf inducing protein 0.0263597
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0260603
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0250329
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0249904
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0248399
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0248197
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0247351
PYGB phosphorylase, glycogen; brain 0.0241443
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0232807
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.0232424
SET SET nuclear proto-oncogene 0.0231505
MLPH melanophilin 0.0230179
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0229724
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0227529
TNIP1 TNFAIP3 interacting protein 1 0.0225131
CEP250 centrosomal protein 250kDa 0.0222957
ANGPTL4 angiopoietin-like 4 0.0222501
RPS6 ribosomal protein S6 0.0221844
SON SON DNA binding protein 0.0219529
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0216931
SFPQ splicing factor proline/glutamine-rich 0.0216637
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0215452
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.021484
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0211238
ADAM17 ADAM metallopeptidase domain 17 0.0211059
MCL1 myeloid cell leukemia 1 0.0207625
TRIO trio Rho guanine nucleotide exchange factor 0.020628
KRT8 keratin 8, type II 0.0204791
ZMIZ1 zinc finger, MIZ-type containing 1 0.0203865
HPCAL1 hippocalcin-like 1 0.0203215
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0202464
EEF1G eukaryotic translation elongation factor 1 gamma 0.0198582
RLIM ring finger protein, LIM domain interacting 0.0196452
PCNT pericentrin 0.0196217
RACK1 receptor for activated C kinase 1 0.0196053
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.019594
UBA1 ubiquitin-like modifier activating enzyme 1 0.0195359
PRRC2A proline-rich coiled-coil 2A 0.0193608
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0189866
MINK1 misshapen-like kinase 1 0.0188091
MOK MOK protein kinase 0.0186706
SPRY4 sprouty homolog 4 (Drosophila) 0.0185162
EIF4H eukaryotic translation initiation factor 4H 0.0184382
STX1A syntaxin 1A (brain) 0.01814
DNTTIP1 deoxynucleotidyltransferase, terminal, interacting protein 1 0.0179661
EMP1 epithelial membrane protein 1 0.0179571
KLC1 kinesin light chain 1 0.01782
AREG amphiregulin 0.017722
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0176308
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0175702
NUMA1 nuclear mitotic apparatus protein 1 0.0175532
MIDEAS mitotic deacetylase associated SANT domain protein 0.0175425
USP9X ubiquitin specific peptidase 9, X-linked 0.0174665
RPL23 ribosomal protein L23 0.0173751

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.320274
PTMA prothymosin, alpha -0.116858
DLG1 discs, large homolog 1 (Drosophila) -0.0991148
VIM vimentin -0.0927304
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0814465
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0795243
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0792938
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0733429
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0730414
TP63 tumor protein p63 -0.0670487
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0642479
CD44 CD44 molecule (Indian blood group) -0.0558642
EHBP1 EH domain binding protein 1 -0.0516483
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0478653
CANX calnexin -0.0473474
TXNIP thioredoxin interacting protein -0.0441
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0428589
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0427752
TMEM123 transmembrane protein 123 -0.0411873
LMAN1 lectin, mannose-binding, 1 -0.0404292
TMSB10 thymosin beta 10 -0.0398471
EPHA4 EPH receptor A4 -0.0396308
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0373126
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0370703
DPYD dihydropyrimidine dehydrogenase -0.0363983
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0362992
CFAP299 cilia and flagella associated protein 299 -0.035281
WASF2 WAS protein family, member 2 -0.035147
MAP4 microtubule-associated protein 4 -0.0343459
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0336751
COL5A2 collagen, type V, alpha 2 -0.0331531
RAB7A RAB7A, member RAS oncogene family -0.03221
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0319362
PDIA3 protein disulfide isomerase family A, member 3 -0.0314598
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0308167
FTH1 ferritin, heavy polypeptide 1 -0.030755
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0297764
SRGN serglycin -0.029617
GLG1 golgi glycoprotein 1 -0.0294331
CADM2 cell adhesion molecule 2 -0.0281757
EFNA5 ephrin-A5 -0.0278803
FTL ferritin, light polypeptide -0.0277021
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0272454
GARS1 glycyl-tRNA synthetase 1 -0.0272217
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.026428
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0260118
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0258162
BIRC6 baculoviral IAP repeat containing 6 -0.0249129
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha -0.0248918
GNAS GNAS complex locus -0.0246855
GOLGA4 golgin A4 -0.0244862
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0244635
BRWD1 bromodomain and WD repeat domain containing 1 -0.0242201
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0240377
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0239482
EPB41 erythrocyte membrane protein band 4.1 -0.0232572
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0231078
ALDH7A1 aldehyde dehydrogenase 7 family, member A1 -0.0231049
WSB1 WD repeat and SOCS box containing 1 -0.0227833
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0227642
RAI1 retinoic acid induced 1 -0.0226384
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0225211
KTN1 kinectin 1 (kinesin receptor) -0.0223535
SLC38A2 solute carrier family 38, member 2 -0.0216188
MYADM myeloid-associated differentiation marker -0.0215563
KDM2A lysine (K)-specific demethylase 2A -0.0214513
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0214324
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0214295
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0212636
CSMD3 CUB and Sushi multiple domains 3 -0.0211997
ZMYND8 zinc finger, MYND-type containing 8 -0.0211672
HMGA1 high mobility group AT-hook 1 -0.0205794
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0205246
KLF6 Kruppel-like factor 6 -0.0203889
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0203654
JMJD1C jumonji domain containing 1C -0.0200526
FAF1 Fas (TNFRSF6) associated factor 1 -0.0200036
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0199942
IARS1 isoleucyl-tRNA synthetase 1 -0.0199825
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0195571
ANKRD28 ankyrin repeat domain 28 -0.0195079
MBD5 methyl-CpG binding domain protein 5 -0.0194816
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0191551
ENO2 enolase 2 (gamma, neuronal) -0.0190344
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0187951
NF1 neurofibromin 1 -0.0185196
RBM25 RNA binding motif protein 25 -0.0184711
TM4SF1 transmembrane 4 L six family member 1 -0.0184228
TAPBP TAP binding protein (tapasin) -0.0182843
NBEAL1 neurobeachin-like 1 -0.0181185
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0179235
ZNF292 zinc finger protein 292 -0.0179109
FNIP1 folliculin interacting protein 1 -0.0177978
SRP54 signal recognition particle 54kDa -0.0177969
VDAC1 voltage-dependent anion channel 1 -0.0177094
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0176867
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0176664
RIGI RNA sensor RIG-I -0.0174393
MYOF myoferlin -0.0173931
PLIN2 perilipin 2 -0.0173096