DTP3_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description DTP3 perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the DTP3_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.123066
DST dystonin 0.121466
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.115787
PSD3 pleckstrin and Sec7 domain containing 3 0.113438
EEF2 eukaryotic translation elongation factor 2 0.0992054
ASPH aspartate beta-hydroxylase 0.0908513
PDE10A phosphodiesterase 10A 0.0905015
MAML3 mastermind-like 3 (Drosophila) 0.072615
TRIO trio Rho guanine nucleotide exchange factor 0.0658981
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.064761
NALF1 NALCN channel auxiliary factor 1 0.0584104
GRAMD1B GRAM domain containing 1B 0.057453
CDH13 cadherin 13 0.0558285
IGF1R insulin-like growth factor 1 receptor 0.0548763
SMOC1 SPARC related modular calcium binding 1 0.053476
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0514692
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0512269
KYNU kynureninase 0.0499822
NONO non-POU domain containing, octamer-binding 0.0486594
TBXT T-box transcription factor T 0.0485388
PM20D1 peptidase M20 domain containing 1 0.0484869
PDLIM5 PDZ and LIM domain 5 0.048479
DOCK4 dedicator of cytokinesis 4 0.0477971
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0462578
RTN1 reticulon 1 0.0460713
HDAC4 histone deacetylase 4 0.04503
PDE4D phosphodiesterase 4D, cAMP-specific 0.0449508
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0426201
SRRM2 serine/arginine repetitive matrix 2 0.0423074
RPL31 ribosomal protein L31 0.0419556
DOCK5 dedicator of cytokinesis 5 0.0402013
RPL3 ribosomal protein L3 0.0400785
PBX1 pre-B-cell leukemia homeobox 1 0.0397781
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0394321
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0393448
PTPRM protein tyrosine phosphatase, receptor type, M 0.039007
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0379942
SAMD4A sterile alpha motif domain containing 4A 0.0371739
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0365735
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0355943
SMYD3 SET and MYND domain containing 3 0.035523
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0346203
RPL23 ribosomal protein L23 0.0335329
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0332031
SH3KBP1 SH3-domain kinase binding protein 1 0.0331573
MYH9 myosin, heavy chain 9, non-muscle 0.0328319
NPAS2 neuronal PAS domain protein 2 0.0326231
AHNAK AHNAK nucleoprotein 0.0320518
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0319848
RPH3AL rabphilin 3A-like (without C2 domains) 0.031969
COL4A5 collagen, type IV, alpha 5 0.031733
RLIM ring finger protein, LIM domain interacting 0.0316111
KIAA0825 KIAA0825 0.0316084
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0312777
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.0304564
PRKN parkin RBR E3 ubiquitin protein ligase 0.0303072
FLNA filamin A, alpha 0.0301447
CTIF CBP80/20-dependent translation initiation factor 0.0300475
HSPA8 heat shock 70kDa protein 8 0.0296647
LOC112694756 uncharaterized LOC112694756 0.0295899
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0294333
IGFBP3 insulin-like growth factor binding protein 3 0.0291467
COL5A2 collagen, type V, alpha 2 0.0290726
GDA guanine deaminase 0.0282689
ADGRD1 adhesion G protein-coupled receptor D1 0.0280976
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0280923
SMAD2 SMAD family member 2 0.0278408
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0274294
PLEC plectin 0.0273933
PTEN phosphatase and tensin homolog 0.0272974
COL8A1 collagen, type VIII, alpha 1 0.0271469
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 0.0261372
TNRC18 trinucleotide repeat containing 18 0.0260166
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0259428
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0256324
ANKRD11 ankyrin repeat domain 11 0.0254706
ATXN1 ataxin 1 0.0248612
RPS12 ribosomal protein S12 0.0248241
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0247228
NCOR2 nuclear receptor corepressor 2 0.0246371
EIF4B eukaryotic translation initiation factor 4B 0.0243052
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.024231
PDE7B phosphodiesterase 7B 0.0240355
PCBP3 poly(rC) binding protein 3 0.0240208
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0237979
RPS4X ribosomal protein S4, X-linked 0.0237403
NIBAN2 niban apoptosis regulator 2 0.0234999
COL4A6 collagen, type IV, alpha 6 0.0231827
RPS17 ribosomal protein S17 0.0230573
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0230329
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0229337
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0227252
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0226972
INTS6 integrator complex subunit 6 0.0225707
EXOC4 exocyst complex component 4 0.0224828
RAB3B RAB3B, member RAS oncogene family 0.0224397
NFE2L2 nuclear factor, erythroid 2-like 2 0.0223162
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0219842
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0219293
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0216858

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.288927
FN1 fibronectin 1 -0.191451
NAMPT nicotinamide phosphoribosyltransferase -0.154968
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.142905
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.124505
TM4SF1 transmembrane 4 L six family member 1 -0.111226
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0803181
TFPI2 tissue factor pathway inhibitor 2 -0.0735943
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0711646
ESYT2 extended synaptotagmin-like protein 2 -0.0692485
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0581214
TPT1 tumor protein, translationally-controlled 1 -0.0565135
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0563865
NBEAL1 neurobeachin-like 1 -0.0555801
SPAG9 sperm associated antigen 9 -0.051448
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0511057
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0509392
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0499519
GOLGA4 golgin A4 -0.049769
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0492142
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0488669
FNDC3A fibronectin type III domain containing 3A -0.0484745
SRGN serglycin -0.0474639
PTMA prothymosin, alpha -0.0468771
PDIA3 protein disulfide isomerase family A, member 3 -0.0465367
MCL1 myeloid cell leukemia 1 -0.0459077
RGS2 regulator of G-protein signaling 2 -0.0459017
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0445809
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 -0.0441946
RTN4 reticulon 4 -0.0425172
UBC ubiquitin C -0.0424915
RPS2 ribosomal protein S2 -0.0415147
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.040579
NDRG1 N-myc downstream regulated 1 -0.0405619
IL6 interleukin 6 -0.037155
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0362567
KMT2C lysine (K)-specific methyltransferase 2C -0.0360467
BASP1 brain abundant, membrane attached signal protein 1 -0.036005
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0359428
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0358088
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0355139
MXI1 MAX interactor 1, dimerization protein -0.0346777
ELL2 elongation factor, RNA polymerase II, 2 -0.0346584
KMT2E lysine (K)-specific methyltransferase 2E -0.0345496
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0343803
STC1 stanniocalcin 1 -0.0333889
RAB1A RAB1A, member RAS oncogene family -0.0317818
FTL ferritin, light polypeptide -0.0317384
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0315785
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0308456
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0306721
IFIH1 interferon induced with helicase C domain 1 -0.0300892
HILPDA hypoxia inducible lipid droplet-associated -0.0297428
FAM13A family with sequence similarity 13, member A -0.0292233
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0292059
TGFBI transforming growth factor, beta-induced, 68kDa -0.0289115
KTN1 kinectin 1 (kinesin receptor) -0.0284315
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0283651
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0279455
SEC24A SEC24 family member A -0.0276225
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0275208
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.027337
SBF2 SET binding factor 2 -0.0269587
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0267878
CCDC88A coiled-coil domain containing 88A -0.0267792
NCOA7 nuclear receptor coactivator 7 -0.0267713
GNAS GNAS complex locus -0.0265304
RPL38 ribosomal protein L38 -0.0262167
SLC39A8 solute carrier family 39 (zinc transporter), member 8 -0.0261941
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0260944
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0260414
SUCO SUN domain containing ossification factor -0.0260073
SEC31A SEC31 homolog A (S. cerevisiae) -0.0259462
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0258077
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0256446
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0255226
FTH1 ferritin, heavy polypeptide 1 -0.0251428
EGR1 early growth response 1 -0.0250684
DGKD diacylglycerol kinase, delta 130kDa -0.0250239
CA12 carbonic anhydrase XII -0.0250209
CEP350 centrosomal protein 350kDa -0.0249733
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0248123
LMAN1 lectin, mannose-binding, 1 -0.0248096
CEP170 centrosomal protein 170kDa -0.0247387
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0240887
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0239377
WDR45B WD repeat domain 45B -0.0239187
PDGFA platelet-derived growth factor alpha polypeptide -0.0238908
PNPLA8 patatin-like phospholipase domain containing 8 -0.0237481
ZNF292 zinc finger protein 292 -0.0237057
TENT5A terminal nucleotidyltransferase 5A -0.0232782
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0229968
ACBD3 acyl-CoA binding domain containing 3 -0.0229744
BMERB1 bMERB domain containing 1 -0.0229637
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0228651
S100A6 S100 calcium binding protein A6 -0.0227654
WSB1 WD repeat and SOCS box containing 1 -0.0226961
RPL36A ribosomal protein L36a -0.0223884
SEPTIN7 septin 7 -0.0223219
S100A10 S100 calcium binding protein A10 -0.0222025